On 02/12/2018 07:01 AM, Claris Baby via Bioc-devel wrote:
Dear all,I am trying to build a package for RNA-seq analysis combining
different existing packages in bioconductor and am facing problem while trying
to run Check PackageThere is no error but a warning saying
checking Rd cross-references ... WARNING
Missing link or links in documentation object 'annotate.Rd':
‘biomaRt’
Missing link or links in documentation object 'countT.Rd':
‘systemPipeR’
See section 'Cross-references' in the 'Writing R Extensions' manual.
How can I change this?
It would be very helpful if anyone could suggest where I am going wrong and how
to correct it.Thanks in advance
Warm Regards,Claris
It is usually helpful to provide an explicit example of what you are
trying to do, e.g., a code snippet or reference to a git repository,
file, and line number, as well as the output of sessionInfo().
From
https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Cross_002dreferences
Likely you have said \link[foo]{bar} or \link{bar} but meant
\link{biomaRt:foo}{bar} or similar.
Martin
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