Dear All,
The new update of SpatialExperiement includes a molecules() method, and this appears to be causing a conflict with the MoleculeExperiement<https://github.com/SydneyBioX/MoleculeExperiment> molecules() accessor. When calling molecules(me, assayName = "detected"), the following error is reported: unable to find an inherited method for function 'molecules' for signature '"MoleculeExperiment"' Adding MoleculeExperiement:: to the molecules() call fixes the issue, but this is not ideal, as it really should not be necessary since a molecules() method exists for the MoleculeExperiement class. Additionally, MoleculeExperiement was explicitly built to be interoperable with SpatialExperiement and imports SpatialExperiement::SpatialExperiement() in order to output spe objects. Is there any way to overcome this conflict? Regards, Nick [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
