On 27/07/2022 01:44, Dale C wrote:
Hi all,

I recently updated my ccp4 package to Program suite v8.0.002 and i have now run 
into a few issues with other programs. The issues are highlighted below...

- When i click 'Open in Coot' on any output through Phenix (so far only tested 
phenix.refine and phenix.phaser), i no longer see anything open. Nor do i see the 
"Connected to Phenix" button in the toolbar on Coot.
There is probably useful information written to the terminal. AFAIR, you are not the first person to experience this, I forget what the problem and solution was but I think that it was trivial.

- Coot also seems to have an issue with not loading the amino acid restraints 
so when i click real-space refine, i get the error 'unable to find restraints 
for residue x,y,z'.

When you start Coot, what does it say as it tries to load the dictionaries for the standard residues?

Paul.

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