Looks like the fix is a series of patches that can be found at
https://lkml.org/lkml/2013/6/3/148 and the fix was committed as

Takashi Iwai:

      ALSA: hda/via - Fix wrongly cleared pins after suspend on VT1802



On Wed, Jun 12, 2013 at 10:18 PM, Ben Bromley <b...@amongotheritems.org>wrote:

> Package: src:linux
> Version: 3.9.5-1
> Followup-For: Bug #711539
>
> This bug seems to have been fixed when I upgraded to
> linux-image-3.10-rc5-amd64.
>
>
> -- Package-specific info:
> ** Kernel log: boot messages should be attached
>
> ** Model information
> sys_vendor: System76, Inc.
> product_name: Pangolin Performance
> product_version: panp9
> chassis_vendor: No Enclosure
> chassis_version: N/A
> bios_vendor: American Megatrends Inc.
> bios_version: 4.6.5
> board_vendor: System76, Inc.
> board_name: Pangolin Performance
> board_version: panp9
>
> ** PCI devices:
> 00:00.0 Host bridge [0600]: Intel Corporation 2nd Generation Core
> Processor Family DRAM Controller [8086:0104] (rev 09)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx-
>         Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort+ >SERR- <PERR- INTx-
>         Latency: 0
>         Capabilities: <access denied>
>
> 00:02.0 VGA compatible controller [0300]: Intel Corporation 2nd Generation
> Core Processor Family Integrated Graphics Controller [8086:0126] (rev 09)
> (prog-if 00 [VGA controller])
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin A routed to IRQ 49
>         Region 0: Memory at f7800000 (64-bit, non-prefetchable) [size=4M]
>         Region 2: Memory at e0000000 (64-bit, prefetchable) [size=256M]
>         Region 4: I/O ports at f000 [size=64]
>         Expansion ROM at <unassigned> [disabled]
>         Capabilities: <access denied>
>         Kernel driver in use: i915
>
> 00:14.0 USB controller [0c03]: Intel Corporation 7 Series/C210 Series
> Chipset Family USB xHCI Host Controller [8086:1e31] (rev 04) (prog-if 30
> [XHCI])
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin A routed to IRQ 45
>         Region 0: Memory at f7e00000 (64-bit, non-prefetchable) [size=64K]
>         Capabilities: <access denied>
>         Kernel driver in use: xhci_hcd
>
> 00:16.0 Communication controller [0780]: Intel Corporation 7 Series/C210
> Series Chipset Family MEI Controller #1 [8086:1e3a] (rev 04)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin A routed to IRQ 43
>         Region 0: Memory at f7e1a000 (64-bit, non-prefetchable) [size=16]
>         Capabilities: <access denied>
>         Kernel driver in use: mei_me
>
> 00:1a.0 USB controller [0c03]: Intel Corporation 7 Series/C210 Series
> Chipset Family USB Enhanced Host Controller #2 [8086:1e2d] (rev 04)
> (prog-if 20 [EHCI])
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx-
>         Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin A routed to IRQ 16
>         Region 0: Memory at f7e18000 (32-bit, non-prefetchable) [size=1K]
>         Capabilities: <access denied>
>         Kernel driver in use: ehci-pci
>
> 00:1b.0 Audio device [0403]: Intel Corporation 7 Series/C210 Series
> Chipset Family High Definition Audio Controller [8086:1e20] (rev 04)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Interrupt: pin A routed to IRQ 50
>         Region 0: Memory at f7e10000 (64-bit, non-prefetchable) [size=16K]
>         Capabilities: <access denied>
>         Kernel driver in use: snd_hda_intel
>
> 00:1c.0 PCI bridge [0604]: Intel Corporation 7 Series/C210 Series Chipset
> Family PCI Express Root Port 1 [8086:1e10] (rev c4) (prog-if 00 [Normal
> decode])
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Bus: primary=00, secondary=01, subordinate=01, sec-latency=0
>         Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort+ <SERR- <PERR-
>         BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
>                 PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
>         Capabilities: <access denied>
>         Kernel driver in use: pcieport
>
> 00:1c.2 PCI bridge [0604]: Intel Corporation 7 Series/C210 Series Chipset
> Family PCI Express Root Port 3 [8086:1e14] (rev c4) (prog-if 00 [Normal
> decode])
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Bus: primary=00, secondary=02, subordinate=02, sec-latency=0
>         Memory behind bridge: f7d00000-f7dfffff
>         Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- <SERR- <PERR-
>         BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
>                 PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
>         Capabilities: <access denied>
>         Kernel driver in use: pcieport
>
> 00:1c.3 PCI bridge [0604]: Intel Corporation 7 Series/C210 Series Chipset
> Family PCI Express Root Port 4 [8086:1e16] (rev c4) (prog-if 00 [Normal
> decode])
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Bus: primary=00, secondary=03, subordinate=03, sec-latency=0
>         I/O behind bridge: 0000e000-0000efff
>         Memory behind bridge: f7c00000-f7cfffff
>         Prefetchable memory behind bridge:
> 00000000f0000000-00000000f00fffff
>         Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- <SERR- <PERR-
>         BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
>                 PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
>         Capabilities: <access denied>
>         Kernel driver in use: pcieport
>
> 00:1d.0 USB controller [0c03]: Intel Corporation 7 Series/C210 Series
> Chipset Family USB Enhanced Host Controller #1 [8086:1e26] (rev 04)
> (prog-if 20 [EHCI])
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx-
>         Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin A routed to IRQ 23
>         Region 0: Memory at f7e17000 (32-bit, non-prefetchable) [size=1K]
>         Capabilities: <access denied>
>         Kernel driver in use: ehci-pci
>
> 00:1f.0 ISA bridge [0601]: Intel Corporation HM76 Express Chipset LPC
> Controller [8086:1e59] (rev 04)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx-
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Capabilities: <access denied>
>         Kernel driver in use: lpc_ich
>
> 00:1f.2 SATA controller [0106]: Intel Corporation 7 Series Chipset Family
> 6-port SATA Controller [AHCI mode] [8086:1e03] (rev 04) (prog-if 01 [AHCI
> 1.0])
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz+ UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0
>         Interrupt: pin B routed to IRQ 47
>         Region 0: I/O ports at f0b0 [size=8]
>         Region 1: I/O ports at f0a0 [size=4]
>         Region 2: I/O ports at f090 [size=8]
>         Region 3: I/O ports at f080 [size=4]
>         Region 4: I/O ports at f060 [size=32]
>         Region 5: Memory at f7e16000 (32-bit, non-prefetchable) [size=2K]
>         Capabilities: <access denied>
>         Kernel driver in use: ahci
>
> 00:1f.3 SMBus [0c05]: Intel Corporation 7 Series/C210 Series Chipset
> Family SMBus Controller [8086:1e22] (rev 04)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster- SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx-
>         Status: Cap- 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Interrupt: pin C routed to IRQ 18
>         Region 0: Memory at f7e15000 (64-bit, non-prefetchable) [size=256]
>         Region 4: I/O ports at f040 [size=32]
>
> 02:00.0 Network controller [0280]: Intel Corporation Centrino Wireless-N
> 1030 [Rainbow Peak] [8086:008a] (rev 34)
>         Subsystem: Intel Corporation Centrino Wireless-N 1030 BGN
> [8086:5305]
>         Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Interrupt: pin A routed to IRQ 48
>         Region 0: Memory at f7d00000 (64-bit, non-prefetchable) [size=8K]
>         Capabilities: <access denied>
>         Kernel driver in use: iwlwifi
>
> 03:00.0 Unassigned class [ff00]: Realtek Semiconductor Co., Ltd. Device
> [10ec:5289] (rev 01)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Interrupt: pin B routed to IRQ 44
>         Region 0: Memory at f7c00000 (32-bit, non-prefetchable) [size=64K]
>         Capabilities: <access denied>
>         Kernel driver in use: rtsx_pci
>
> 03:00.2 Ethernet controller [0200]: Realtek Semiconductor Co., Ltd.
> RTL8111/8168 PCI Express Gigabit Ethernet controller [10ec:8168] (rev 0a)
>         Subsystem: CLEVO/KAPOK Computer Device [1558:0240]
>         Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop-
> ParErr- Stepping- SERR- FastB2B- DisINTx+
>         Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort-
> <TAbort- <MAbort- >SERR- <PERR- INTx-
>         Latency: 0, Cache Line Size: 64 bytes
>         Interrupt: pin A routed to IRQ 46
>         Region 0: I/O ports at e000 [size=256]
>         Region 2: Memory at f0004000 (64-bit, prefetchable) [size=4K]
>         Region 4: Memory at f0000000 (64-bit, prefetchable) [size=16K]
>         Capabilities: <access denied>
>         Kernel driver in use: r8169
>
>
> ** USB devices:
> Bus 001 Device 002: ID 04f2:b2b0 Chicony Electronics Co., Ltd Camera
> Bus 003 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub
> Bus 004 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub
> Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
> Bus 002 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub
> Bus 003 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
> Bus 004 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
>
>
> -- System Information:
> Debian Release: jessie/sid
>   APT prefers unstable
>   APT policy: (500, 'unstable'), (1, 'experimental')
> Architecture: amd64 (x86_64)
> Foreign Architectures: i386
>
> Kernel: Linux 3.10-rc5-amd64 (SMP w/4 CPU cores)
> Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
> Shell: /bin/sh linked to /bin/dash
>
> Versions of packages linux-image-3.9-1-amd64 depends on:
> ii  debconf [debconf-2.0]                   1.5.50
> ii  initramfs-tools [linux-initramfs-tool]  0.112
> ii  kmod                                    9-3
> ii  linux-base                              3.5
> ii  module-init-tools                       9-3
>
> Versions of packages linux-image-3.9-1-amd64 recommends:
> ii  firmware-linux-free  3.2
>
> Versions of packages linux-image-3.9-1-amd64 suggests:
> pn  debian-kernel-handbook  <none>
> ii  extlinux                3:4.05+dfsg-6+deb7u3
> ii  grub-pc                 2.00-14
> pn  linux-doc-3.9           <none>
>
> Versions of packages linux-image-3.9-1-amd64 is related to:
> ii  firmware-atheros        0.38
> ii  firmware-bnx2           0.38
> ii  firmware-bnx2x          0.38
> ii  firmware-brcm80211      0.38
> ii  firmware-intelwimax     0.38
> ii  firmware-ipw2x00        0.38
> ii  firmware-ivtv           0.38
> ii  firmware-iwlwifi        0.38
> ii  firmware-libertas       0.38
> pn  firmware-linux          <none>
> ii  firmware-linux-nonfree  0.38
> ii  firmware-myricom        0.38
> ii  firmware-netxen         0.38
> ii  firmware-qlogic         0.38
> ii  firmware-ralink         0.38
> ii  firmware-realtek        0.38
> pn  xen-hypervisor          <none>
>
> -- debconf information:
>   linux-image-3.9-1-amd64/postinst/ignoring-ramdisk:
> * linux-image-3.9-1-amd64/postinst/missing-firmware-3.9-1-amd64:
>   linux-image-3.9-1-amd64/prerm/removing-running-kernel-3.9-1-amd64: true
>   linux-image-3.9-1-amd64/postinst/depmod-error-initrd-3.9-1-amd64: false
>

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