Source: pairtools
Version: 0.3.0-3
Severity: serious
Tags: upstream patch
Justification: FTBFS
Forwarded: https://github.com/open2c/pairtools/pull/108
pairtools FTBFS with Python 3.10:
======================================================================
ERROR: pairtools (unittest.loader._FailedTest)
----------------------------------------------------------------------
ImportError: Failed to import test module: pairtools
Traceback (most recent call last):
File "/usr/lib/python3.10/unittest/loader.py", line 470, in _find_test_path
package = self._get_module_from_name(name)
File "/usr/lib/python3.10/unittest/loader.py", line 377, in
_get_module_from_name
__import__(name)
File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/pairtools/__init__.py",
line 116, in <module>
from .pairtools_dedup import dedup
File
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/pairtools/pairtools_dedup.py",
line 14, in <module>
from .pairtools_stats import PairCounter
File
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/pairtools/pairtools_stats.py",
line 10, in <module>
from collections import OrderedDict, Mapping
ImportError: cannot import name 'Mapping' from 'collections'
(/usr/lib/python3.10/collections/__init__.py)
----------------------------------------------------------------------
Ran 1 test in 0.000s
See:
https://buildd.debian.org/status/fetch.php?pkg=pairtools&arch=amd64&ver=0.3.0-3%2Bb1&stamp=1637486558&raw=0
I'll file an NMU, shortly.
SR
