Source: libgkarrays
Dear maintainer,
Please find attached a final version of this patch for the time_t
transition. This patch is being uploaded to unstable.
Note that this adds a versioned build-dependency on dpkg-dev, to guard
against accidental backports with a wrong ABI.
Thanks!
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.5.0-21-generic (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE,
TAINT_UNSIGNED_MODULE
Locale: LANG=C, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: unable to detect
diff -Nru libgkarrays-2.1.0+dfsg/debian/changelog
libgkarrays-2.1.0+dfsg/debian/changelog
--- libgkarrays-2.1.0+dfsg/debian/changelog 2020-11-19 09:41:29.000000000
+0000
+++ libgkarrays-2.1.0+dfsg/debian/changelog 2024-02-28 18:55:49.000000000
+0000
@@ -1,3 +1,10 @@
+libgkarrays (2.1.0+dfsg-4.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename libraries for 64-bit time_t transition. Closes: #1062316
+
+ -- Benjamin Drung <bdr...@debian.org> Wed, 28 Feb 2024 18:55:49 +0000
+
libgkarrays (2.1.0+dfsg-4) unstable; urgency=medium
* Fix installation of shared library
diff -Nru libgkarrays-2.1.0+dfsg/debian/control
libgkarrays-2.1.0+dfsg/debian/control
--- libgkarrays-2.1.0+dfsg/debian/control 2020-11-19 09:41:29.000000000
+0000
+++ libgkarrays-2.1.0+dfsg/debian/control 2024-02-28 18:55:49.000000000
+0000
@@ -3,8 +3,8 @@
Uploaders: Andreas Tille <ti...@debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper-compat (= 13),
- d-shlibs,
+Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
+ d-shlibs (>= 0.106),
zlib1g-dev
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/libgkarrays
@@ -12,7 +12,10 @@
Homepage: http://crac.gforge.inria.fr/gkarrays/
Rules-Requires-Root: no
-Package: libgkarrays1
+Package: libgkarrays1t64
+Provides: ${t64:Provides}
+Replaces: libgkarrays1
+Conflicts: libgkarrays1 (<< ${source:Version})
Architecture: any
Section: libs
Depends: ${shlibs:Depends},
@@ -34,7 +37,7 @@
Section: libdevel
Depends: ${shlibs:Depends},
${misc:Depends},
- libgkarrays1 (= ${binary:Version})
+ libgkarrays1t64 (= ${binary:Version})
Description: library to query large collection of NGS sequences (development)
Gk-arrays are provided as a simple-to-use C++ library dedicated to
queries on large collection of sequences as produced by high-throughput
diff -Nru libgkarrays-2.1.0+dfsg/debian/libgkarrays1t64.lintian-overrides
libgkarrays-2.1.0+dfsg/debian/libgkarrays1t64.lintian-overrides
--- libgkarrays-2.1.0+dfsg/debian/libgkarrays1t64.lintian-overrides
1970-01-01 00:00:00.000000000 +0000
+++ libgkarrays-2.1.0+dfsg/debian/libgkarrays1t64.lintian-overrides
2024-02-28 18:55:24.000000000 +0000
@@ -0,0 +1 @@
+libgkarrays1t64: package-name-doesnt-match-sonames libgkarrays1
diff -Nru libgkarrays-2.1.0+dfsg/debian/rules
libgkarrays-2.1.0+dfsg/debian/rules
--- libgkarrays-2.1.0+dfsg/debian/rules 2020-11-19 09:41:29.000000000 +0000
+++ libgkarrays-2.1.0+dfsg/debian/rules 2024-02-28 18:55:47.000000000 +0000
@@ -12,6 +12,7 @@
override_dh_install:
dh_install
d-shlibmove --commit \
+ --t64 \
--multiarch \
--devunversioned \
--exclude-la \
@@ -20,7 +21,7 @@
--movedev
debian/tmp/usr/lib/$(DEB_HOST_MULTIARCH)/pkgconfig
usr/lib/$(DEB_HOST_MULTIARCH) \
debian/tmp/usr/lib/$(DEB_HOST_MULTIARCH)/libGkArrays.so
# now move libProgressBar manually
- dh_install -p libgkarrays1
usr/lib/$(DEB_HOST_MULTIARCH)/libProgressBar.so.0*
usr/lib/$(DEB_HOST_MULTIARCH)
+ dh_install -p libgkarrays1t64
usr/lib/$(DEB_HOST_MULTIARCH)/libProgressBar.so.0*
usr/lib/$(DEB_HOST_MULTIARCH)
chmod -x debian/*/usr/lib/$(DEB_HOST_MULTIARCH)/libProgressBar.so.0.*
dh_install -p libgkarrays-dev
usr/lib/$(DEB_HOST_MULTIARCH)/libProgressBar.so
usr/lib/$(DEB_HOST_MULTIARCH)
dh_install -p libgkarrays-dev
usr/lib/$(DEB_HOST_MULTIARCH)/libProgressBar.a
usr/lib/$(DEB_HOST_MULTIARCH)
