Source: poa Version: 2.0+20060928-8 Severity: serious Justification: FTBFS Tags: trixie sid ftbfs User: lu...@debian.org Usertags: ftbfs-20240313 ftbfs-trixie ftbfs-impfuncdef
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. This is most likely caused by a change in dpkg 1.22.6, that enabled -Werror=implicit-function-declaration. For more information, see https://wiki.debian.org/qa.debian.org/FTBFS#A2024-03-13_-Werror.3Dimplicit-function-declaration Relevant part (hopefully): > gcc -g -O2 -Werror=implicit-function-declaration > -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong > -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g > -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. -Wdate-time -D_FORTIFY_SOURCE=2 > -c -o align_lpo_po2.o align_lpo_po2.c > In file included from align_lpo_po2.c:2: > align_lpo_po2.c: In function ‘get_lpo_stats’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:41:3: note: in expansion of macro ‘CALLOC’ > 41 | CALLOC (node_type, len, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:42:3: note: in expansion of macro ‘CALLOC’ > 42 | CALLOC (refs_from_right, len, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:43:3: note: in expansion of macro ‘CALLOC’ > 43 | CALLOC (tmp, len, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:44:3: note: in expansion of macro ‘CALLOC’ > 44 | CALLOC (left_links, len, LPOLetterLink_T *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:71:7: note: in expansion of macro ‘CALLOC’ > 71 | CALLOC (left_links[i], 1, LPOLetterLink_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > fasta_format.c: In function ‘read_fasta’: > align_lpo_po2.c: In function ‘trace_back_lpo_alignment’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:120:3: note: in expansion of macro ‘CALLOC’ > 120 | CALLOC (x_al, len_x, LPOLetterRef_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:121:3: note: in expansion of macro ‘CALLOC’ > 121 | CALLOC (y_al, len_y, LPOLetterRef_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > fasta_format.c:48:9: error: implicit declaration of function > ‘stringptr_cat_pos’; did you mean ‘stringptr_cat’? > [-Werror=implicit-function-declaration] > 48 | stringptr_cat_pos(&tmp_seq,line,&length); > | ^~~~~~~~~~~~~~~~~ > | stringptr_cat > align_lpo_po2.c: In function ‘align_lpo_po’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:227:3: note: in expansion of macro ‘CALLOC’ > 227 | CALLOC (next_gap_array, max_gap_length + 2, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:228:3: note: in expansion of macro ‘CALLOC’ > 228 | CALLOC (next_perp_gap_array, max_gap_length + 2, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:254:3: note: in expansion of macro ‘CALLOC’ > 254 | CALLOC (move, len_y, DPMove_T *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:256:5: note: in expansion of macro ‘CALLOC’ > 256 | CALLOC (move[i], len_x, DPMove_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:259:3: note: in expansion of macro ‘CALLOC’ > 259 | CALLOC (init_col_score, len_y+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:262:3: note: in expansion of macro ‘CALLOC’ > 262 | CALLOC (score_rows, len_y+1, DPScore_T *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:264:3: note: in expansion of macro ‘CALLOC’ > 264 | CALLOC (score_rows[-1], len_x+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo_po2.c:312:5: note: in expansion of macro ‘CALLOC’ > 312 | CALLOC (score_rows[i], len_x+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > align_lpo_po2.c:438:44: warning: format ‘%ld’ expects argument of type ‘long > int’, but argument 4 has type ‘int’ [-Wformat=] > 438 | fprintf (stderr, "aligned (%d nodes, %ld edges) to (%d nodes, %ld > edges): ", len_x, n_edges_x, len_y, n_edges_y); > | ~~^ > ~~~~~~~~~ > | | > | > | long int > int > | %d > align_lpo_po2.c:438:69: warning: format ‘%ld’ expects argument of type ‘long > int’, but argument 6 has type ‘int’ [-Wformat=] > 438 | fprintf (stderr, "aligned (%d nodes, %ld edges) to (%d nodes, %ld > edges): ", len_x, n_edges_x, len_y, n_edges_y); > | ~~^ > ~~~~~~~~~ > | | > | > | > long int int > | %d > In file included from black_flag.c:4: > black_flag.c: In function ‘black_flag_init_args’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > black_flag.c:109:3: note: in expansion of macro ‘CALLOC’ > 109 | CALLOC(Program_name,len,char); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > In file included from align_lpo2.c:2: > align_lpo2.c: In function ‘get_seq_left_and_final’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:60:3: note: in expansion of macro ‘CALLOC’ > 60 | CALLOC (is_final_node_x, len_x, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:66:3: note: in expansion of macro ‘CALLOC’ > 66 | CALLOC (x_left, len_x, LPOLetterLink_T *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > In file included from lpo.h:6, > from main.c:3: > main.c: In function ‘main’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:70:7: note: in expansion of macro ‘CALLOC’ > 70 | CALLOC (x_left[i], 1, LPOLetterLink_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > ./default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > main.c:183:3: note: in expansion of macro ‘CALLOC’ > 183 | CALLOC (input_seqs, max_input_seqs, LPOSequence_T *); > | ^~~~~~ > ./default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > align_lpo2.c: In function ‘trace_back_lpo_alignment’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:96:3: note: in expansion of macro ‘CALLOC’ > 96 | CALLOC (x_al, len_x, LPOLetterRef_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > ./default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > main.c:221:9: note: in expansion of macro ‘REALLOC’ > 221 | REALLOC (input_seqs, max_input_seqs, LPOSequence_T *); > | ^~~~~~~ > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:97:3: note: in expansion of macro ‘CALLOC’ > 97 | CALLOC (y_al, len_y, LPOLetterRef_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > ./default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > In file included from ./default.h:16: > main.c:225:30: warning: format ‘%s’ expects argument of type ‘char *’, but > argument 3 has type ‘FILE *’ [-Wformat=] > 225 | WARN_MSG(USERR,(ERRTXT,"Error reading PO list file > %s.\nExiting", > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > 226 | po_list_file),"$Revision: 1.2.2.9 $"); > | ~~~~~~~~~~~~ > | | > | FILE * > ./black_flag.h:212:10: note: in definition of macro ‘WARN_MSG’ > 212 | (sprintf MESSAGE,\ > | ^~~~~~~ > main.c:225:59: note: format string is defined here > 225 | WARN_MSG(USERR,(ERRTXT,"Error reading PO list file > %s.\nExiting", > | ~^ > | | > | char * > align_lpo2.c: In function ‘align_lpo’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:185:3: note: in expansion of macro ‘CALLOC’ > 185 | CALLOC (next_gap_array, max_gap_length + 2, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > ./default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > main.c:254:9: note: in expansion of macro ‘REALLOC’ > 254 | REALLOC (input_seqs, max_input_seqs, LPOSequence_T *); > | ^~~~~~~ > ./default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:186:3: note: in expansion of macro ‘CALLOC’ > 186 | CALLOC (next_perp_gap_array, max_gap_length + 2, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:199:3: note: in expansion of macro ‘CALLOC’ > 199 | CALLOC (move, len_y, DPMove_T *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:201:5: note: in expansion of macro ‘CALLOC’ > 201 | CALLOC (move[i], len_x, DPMove_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:204:3: note: in expansion of macro ‘CALLOC’ > 204 | CALLOC (init_col_score, len_y+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:207:3: note: in expansion of macro ‘CALLOC’ > 207 | CALLOC (curr_score, len_x+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > align_lpo2.c:209:3: note: in expansion of macro ‘CALLOC’ > 209 | CALLOC (prev_score, len_x+1, DPScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > In file included from seq_util.c:2: > seq_util.c: In function ‘read_score_matrix’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > seq_util.c:170:3: note: in expansion of macro ‘CALLOC’ > 170 | CALLOC (m->gap_penalty_x, m->max_gap_length+2, LPOScore_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > seq_util.c:171:3: note: in expansion of macro ‘CALLOC’ > 171 | CALLOC (m->gap_penalty_y, m->max_gap_length+2, LPOScore_T); > | ^~~~~~ > In file included from msa_format.h:17, > from msa_format.c:17: > msa_format.c: In function ‘read_clustal’: > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:169:7: note: in expansion of macro ‘REALLOC’ > 169 | REALLOC (seq_names, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:171:7: note: in expansion of macro ‘REALLOC’ > 171 | REALLOC (seq_titles, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:174:7: note: in expansion of macro ‘REALLOC’ > 174 | REALLOC (aln_mat, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > gcc -g -O2 -Werror=implicit-function-declaration > -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong > -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g > -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. -Wdate-time -D_FORTIFY_SOURCE=2 > -c -o buildup_lpo.o buildup_lpo.c > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:176:7: note: in expansion of macro ‘REALLOC’ > 176 | REALLOC (aln_lengths, n_seqs, int); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:184:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 6 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] > 184 | fprintf(stderr,"%s, line %d: *** invalid memory request: > %s[%d].\n",\ > | > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > 185 | __FILE__,__LINE__,STRINGIFY(memptr),(NUM)); \ > | ~~~~~ > | | > | size_t {aka > long unsigned int} > msa_format.c:185:5: note: in expansion of macro ‘REALLOC’ > 185 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + strlen(aln), > char); > | ^~~~~~~ > default.h:184:68: note: format string is defined here > 184 | fprintf(stderr,"%s, line %d: *** invalid memory request: > %s[%d].\n",\ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~ > msa_format.c:185:5: note: in expansion of macro ‘REALLOC’ > 185 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + strlen(aln), > char); > | ^~~~~~~ > default.h:196:34: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:185:5: note: in expansion of macro ‘REALLOC’ > 185 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + strlen(aln), > char); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > msa_format.c: In function ‘read_pir’: > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:248:7: note: in expansion of macro ‘REALLOC’ > 248 | REALLOC (seq_names, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:250:7: note: in expansion of macro ‘REALLOC’ > 250 | REALLOC (seq_titles, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:252:7: note: in expansion of macro ‘REALLOC’ > 252 | REALLOC (aln_mat, n_seqs, char *); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:254:7: note: in expansion of macro ‘REALLOC’ > 254 | REALLOC (aln_lengths, n_seqs, int); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:184:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 6 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] > 184 | fprintf(stderr,"%s, line %d: *** invalid memory request: > %s[%d].\n",\ > | > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > 185 | __FILE__,__LINE__,STRINGIFY(memptr),(NUM)); \ > | ~~~~~ > msa_format.c:268:7: note: in expansion of macro ‘REALLOC’ > 268 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + > strlen(aln), char); > | ^~~~~~~ > default.h:184:68: note: format string is defined here > 184 | fprintf(stderr,"%s, line %d: *** invalid memory request: > %s[%d].\n",\ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~ > msa_format.c:268:7: note: in expansion of macro ‘REALLOC’ > 268 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + > strlen(aln), char); > | ^~~~~~~ > default.h:196:34: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:268:7: note: in expansion of macro ‘REALLOC’ > 268 | REALLOC (aln_mat[curr_seq], aln_lengths[curr_seq] + > strlen(aln), char); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > msa_format.c: In function ‘lpo_from_aln_mat’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:318:3: note: in expansion of macro ‘CALLOC’ > 318 | CALLOC (column_ids, n_seqs+1, int *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:319:3: note: in expansion of macro ‘CALLOC’ > 319 | CALLOC (res_ids, n_seqs+1, int *); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:326:5: note: in expansion of macro ‘CALLOC’ > 326 | CALLOC (column_ids[i], max_aln_length, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:327:5: note: in expansion of macro ‘CALLOC’ > 327 | CALLOC (res_ids[i], max_aln_length, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:334:3: note: in expansion of macro ‘CALLOC’ > 334 | CALLOC (consens_row, max_aln_length, char); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:347:3: note: in expansion of macro ‘CALLOC’ > 347 | CALLOC (lposeq, 1, LPOSequence_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:351:3: note: in expansion of macro ‘CALLOC’ > 351 | CALLOC (lposeq->sequence, max_aln_length+1, char); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:369:3: note: in expansion of macro ‘REALLOC’ > 369 | REALLOC (lposeq->sequence, len+1, char); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:375:5: note: in expansion of macro ‘CALLOC’ > 375 | CALLOC (curr_seq, 1, LPOSequence_T); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:380:5: note: in expansion of macro ‘CALLOC’ > 380 | CALLOC (curr_seq->sequence, aln_lengths[i]+1, char); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned > int > msa_format.c:398:5: note: in expansion of macro ‘REALLOC’ > 398 | REALLOC (curr_seq->sequence, len+1, char); > | ^~~~~~~ > default.h:196:39: note: format string is defined here > 196 | fprintf(stderr,"requested %d x %d bytes > \n",(NUM),sizeof(ATYPE)); \ > | ~^ > | | > | int > | %ld > msa_format.c:404:5: error: implicit declaration of function > ‘build_seq_to_po_index’ [-Werror=implicit-function-declaration] > 404 | build_seq_to_po_index (lposeq); > | ^~~~~~~~~~~~~~~~~~~~~ > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:406:5: note: in expansion of macro ‘CALLOC’ > 406 | CALLOC (al_x, len, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:407:5: note: in expansion of macro ‘CALLOC’ > 407 | CALLOC (al_y, lposeq->length, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > cc1: some warnings being treated as errors > msa_format.c:428:5: error: implicit declaration of function > ‘fuse_ring_identities’ [-Werror=implicit-function-declaration] > 428 | fuse_ring_identities (lposeq->length, lposeq->letter, > | ^~~~~~~~~~~~~~~~~~~~ > msa_format.c: In function ‘filter_sequence_set’: > default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but > argument 4 has type ‘long unsigned int’ [-Wformat=] > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~ > | | > | long unsigned int > msa_format.c:485:3: note: in expansion of macro ‘CALLOC’ > 485 | CALLOC (keep_seq, n_seqs, int); > | ^~~~~~ > default.h:155:37: note: format string is defined here > 155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); > \ > | ~^ > | | > | int > | %ld > make[2]: *** [<builtin>: fasta_format.o] Error 1 The full build log is available from: http://qa-logs.debian.net/2024/03/13/poa_2.0+20060928-8_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240313;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240313&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
