Bug#777913: marked as done (insighttoolkit4: ftbfs with GCC-5)

Thu, 02 Jul 2015 08:34:06 -0700 

Your message dated Thu, 02 Jul 2015 15:28:14 +0000
with message-id <e1zagpo-0004gy...@franck.debian.org>
and subject line Bug#777913: fixed in insighttoolkit4 4.7.2-2
has caused the Debian Bug report #777913,
regarding insighttoolkit4: ftbfs with GCC-5
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
777913: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=777913
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message --- 
Package: src:insighttoolkit4
Version: 4.6.0-3
Severity: normal
Tags: sid stretch
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-5

Please keep this issue open in the bug tracker for the package it
was filed for.  If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.

The package fails to build in a test rebuild on at least amd64 with
gcc-5/g++-5, but succeeds to build with gcc-4.9/g++-4.9. The
severity of this report may be raised before the stretch release.

The full build log can be found at:
http://people.debian.org/~doko/logs/gcc5-20150205/insighttoolkit4_4.6.0-3_unstable_gcc5.log
The last lines of the build log are at the end of this report.

To build with GCC 5, either set CC=gcc-5 CXX=g++-5 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t experimental install g++ 

Common build failures are C11 as the default C mode, new warnings
resulting in build failures with -Werror turned on, or new/dropped
symbols in Debian symbols files.  For other C/C++ related build failures
see the porting guide at http://gcc.gnu.org/gcc-5/porting_to.html

[...]
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/b9415b821421bb8be4def9aa4c0b3992"
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/201d2b4cc8b069c3798e9a165b65ad0e"
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/6e094a742c77d0fe628c1a407c4439a7"
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png
 
-Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
[ 13%] [ 13%] /usr/bin/cmake -E cmake_progress_report 
/«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/cd6311a99be017655a88ef869488f1dd"
[ 13%] -- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/73c4f57340d1c4f15e04b3c79a31c7f6"
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/84d6cd7a14b825716fbe5f40e1ccc8fb"
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/da24b237f30c5f16251ec223d0654c11"
[ 13%] Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png
[ 13%] Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png
[ 13%] /usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png
 
-Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png
 
-Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png
 
-Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/88285a115d88220eb4e9c2da64ec8356"
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/baebc6fbf4aeafd1e094f0c1ee7b7acf"
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/e85b80d08a9e285d3fba75a81e6f5bde"
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png
Generating 
/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD 
-Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png
 
-Dname=/«PKGBUILDDIR»/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png
 -Dext=.md5 -DExternalData_ACTION=fetch 
-DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P 
/«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/73c4f57340d1c4f15e04b3c79a31c7f6"
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/cd6311a99be017655a88ef869488f1dd"
-- Found object: 
"/«PKGBUILDDIR»/.ExternalData/MD5/da24b237f30c5f16251ec223d0654c11"
make[3]: Leaving directory '/«PKGBUILDDIR»/BUILD'
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles  13 
14 15 16 17 18 19 20 21 22
[ 13%] Built target ITKData
make[2]: Leaving directory '/«PKGBUILDDIR»/BUILD'
make[1]: *** [all] Error 2
Makefile:150: recipe for target 'all' failed
make[1]: Leaving directory '/«PKGBUILDDIR»/BUILD'
dh_auto_build: make -j10 returned exit code 2
make: *** [build-arch] Error 2
debian/rules:84: recipe for target 'build-arch' failed
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2

--- End Message ---
--- Begin Message --- 
Source: insighttoolkit4
Source-Version: 4.7.2-2

We believe that the bug you reported is fixed in the latest version of
insighttoolkit4, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 777...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steve M. Robbins <s...@debian.org> (supplier of updated insighttoolkit4 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sun, 28 Jun 2015 16:07:00 -0500
Source: insighttoolkit4
Binary: libinsighttoolkit4.7 libinsighttoolkit4-dev libinsighttoolkit4-dbg 
insighttoolkit4-examples insighttoolkit4-python
Architecture: source all amd64
Version: 4.7.2-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Steve M. Robbins <s...@debian.org>
Description:
 insighttoolkit4-examples - Image processing toolkit for registration and 
segmentation - exam
 insighttoolkit4-python - Image processing toolkit for registration and 
segmentation - Pyth
 libinsighttoolkit4-dbg - Debugging information for the Insight Toolkit
 libinsighttoolkit4-dev - Image processing toolkit for registration and 
segmentation - deve
 libinsighttoolkit4.7 - Image processing toolkit for registration and 
segmentation - runt
Closes: 777913
Changes:
 insighttoolkit4 (4.7.2-2) unstable; urgency=medium
 .
   * patches/vcl-dunno-about-this-gcc.patch: New.  Upstream patch to build
     VCL with GCC 5.  Closes: #777913.
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libinsighttoolkit4-dbg_4.7.2-2_amd64.deb
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libinsighttoolkit4.7_4.7.2-2_amd64.deb

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--- End Message ---

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