Your message dated Fri, 21 Jul 2023 14:40:51 +0000
with message-id <e1qmrjl-00hgbk...@fasolo.debian.org>
and subject line Bug#1039633: fixed in r-bioc-bioccheck 1.36.1+dfsg-1
has caused the Debian Bug report #1039633,
regarding r-bioc-bioccheck: autopkgtest failure with r-base (4.3.1-1)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1039633: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1039633
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-bioc-bioccheck
Version: 1.34.2+dfsg-1
Severity: serious
Justification: autopkgtest failure
Dear Maintainer,
The autopkgtest of your package fails with r-base (4.3.1-1):
209s RUNIT TEST PROTOCOL -- Tue Jun 27 15:46:32 2023
209s ***********************************************
209s Number of test functions: 48
209s Number of deactivated test functions: 3
209s Number of errors: 0
209s Number of failures: 1
209s
209s
209s 1 Test Suite :
209s BiocCheck RUnit Tests - 48 test functions, 0 errors, 1 failure
209s FAILURE in test_checkBBScompatibility: Error in
checkTrue(.BiocCheck$getNum("note") == 1, "citation produces note") :
209s Test not TRUE
209s citation produces note
209s DEACTIVATED test_checkExportsAreDocumented: Skip this test, it requires a
package non-available in Debian
209s DEACTIVATED test_checkUsageOfDont: Skip this test, it requires a package
non-available in Debian
209s DEACTIVATED test_remotesUsage: Skip this test, it requires a package
non-available in Debian
209s
209s Test files with failing tests
209s
209s test_BiocCheck.R
209s test_checkBBScompatibility
209s test_checkExportsAreDocumented
209s test_checkUsageOfDont
209s test_remotesUsage
209s
209s
209s Error in BiocGenerics:::testPackage("BiocCheck") :
209s unit tests failed for package BiocCheck
https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-bioccheck/34907238/log.gz
Kind Regards,
Bas
--- End Message ---
--- Begin Message ---
Source: r-bioc-bioccheck
Source-Version: 1.36.1+dfsg-1
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
r-bioc-bioccheck, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1039...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated r-bioc-bioccheck package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 21 Jul 2023 15:55:25 +0200
Source: r-bioc-bioccheck
Architecture: source
Version: 1.36.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1039633
Changes:
r-bioc-bioccheck (1.36.1+dfsg-1) unstable; urgency=medium
.
* Team upload.
* Rebuild against latest version of r-base
Closes: #1039633
* New upstream version
* Reduce piuparts noise in transitions
* Standards-Version: 4.6.2 (routine-update)
* dh-update-R to update Build-Depends (routine-update)
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r-bioc-bioccheck_1.36.1+dfsg-1_amd64.buildinfo
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