Bug#1057565: marked as done (kalzium: FTBFS: linking error)

Sat, 13 Apr 2024 12:00:25 -0700 

Your message dated Sat, 13 Apr 2024 18:57:06 +0000
with message-id <e1rviyk-0058ge...@fasolo.debian.org>
and subject line Bug#1057565: fixed in kalzium 4:23.08.5-1
has caused the Debian Bug report #1057565,
regarding kalzium: FTBFS: linking error
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1057565: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1057565
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message --- 
Package: src:kalzium
Version: 4:22.12.3-1
Severity: serious
Tags: ftbfs

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:

--------------------------------------------------------------------------------
[...]
 debian/rules binary
dh binary --with kf5
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure --buildsystem=kf5
        cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake 
-DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc 
-DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON 
-DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON 
-DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run 
-DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON 
-DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=Debian 
-DCMAKE_INSTALL_SYSCONFDIR=/etc -DKDE_INSTALL_USE_QT_SYS_PATHS=ON ..
-- The C compiler identification is GNU 13.2.0
-- The CXX compiler identification is GNU 13.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for __GLIBC__
-- Looking for __GLIBC__ - found
-- Performing Test _OFFT_IS_64BIT
-- Performing Test _OFFT_IS_64BIT - Success
-- Performing Test HAVE_DATE_TIME
-- Performing Test HAVE_DATE_TIME - Success
-- Could not set up the appstream test. appstreamcli is missing.
-- Found Gettext: /usr/bin/msgmerge (found version "0.21")
CMake Warning (dev) at CMakeLists.txt:39 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PythonInterp: /usr/bin/python3 (found version "3.11.7")
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1")
-- Found OCaml: /usr/bin/ocamlc
-- Found Libfacile: /usr/lib/ocaml/facile
-- Checking for module 'chemical-mime-data'
--   Found chemical-mime-data, version 0.1.94
-- Looking for include file ieeefp.h
-- Looking for include file ieeefp.h - not found
-- Found KF5Archive: /usr/lib/x86_64-linux-gnu/cmake/KF5Archive/KF5ArchiveConfig.cmake 
(found version "5.107.0")
-- Found KF5Config: /usr/lib/x86_64-linux-gnu/cmake/KF5Config/KF5ConfigConfig.cmake 
(found version "5.107.0")
-- Found KF5CoreAddons: 
/usr/lib/x86_64-linux-gnu/cmake/KF5CoreAddons/KF5CoreAddonsConfig.cmake (found version 
"5.107.0")
-- Found KF5DocTools: /usr/lib/x86_64-linux-gnu/cmake/KF5DocTools/KF5DocToolsConfig.cmake 
(found version "5.107.0")
-- Found KF5I18n: /usr/lib/x86_64-linux-gnu/cmake/KF5I18n/KF5I18nConfig.cmake (found 
version "5.107.0")
-- Found X11: /usr/include
-- Looking for XOpenDisplay in 
/usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so
-- Looking for XOpenDisplay in 
/usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Found KF5Parts: /usr/lib/x86_64-linux-gnu/cmake/KF5Parts/KF5PartsConfig.cmake (found 
version "5.107.0")
-- Found KF5Plotting: /usr/lib/x86_64-linux-gnu/cmake/KF5Plotting/KF5PlottingConfig.cmake 
(found version "5.107.0")
-- Found KF5UnitConversion: 
/usr/lib/x86_64-linux-gnu/cmake/KF5UnitConversion/KF5UnitConversionConfig.cmake (found 
version "5.107.0")
-- Found KF5WidgetsAddons: 
/usr/lib/x86_64-linux-gnu/cmake/KF5WidgetsAddons/KF5WidgetsAddonsConfig.cmake (found 
version "5.107.0")
-- Found KF5: success (found suitable version "5.107.0", minimum required is 
"5.90.0") found components: Archive Config CoreAddons DocTools I18n Parts Plotting 
UnitConversion WidgetsAddons
-- Kalzium molecular editor enabled
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- The following OPTIONAL packages have been found:

 * PkgConfig
 * OpenBabel3 (required version >= 3.1)
 * AvogadroLibs
 * Eigen3
 * OCaml
 * Libfacile

-- The following REQUIRED packages have been found:

 * ECM (required version >= 5.90.0)
 * PythonInterp
 * Qt5Svg
 * Qt5Script
 * Qt5 (required version >= 5.15.2)
 * KF5Archive (required version >= 5.90.0)
 * KF5DocTools (required version >= 5.90.0)
 * Qt5Gui (required version >= 5.15.2)
 * Gettext
 * KF5I18n (required version >= 5.107.0)
 * KF5Parts (required version >= 5.90.0)
 * KF5Plotting (required version >= 5.90.0)
 * KF5UnitConversion (required version >= 5.90.0)
 * KF5 (required version >= 5.90.0)
 * Qt5OpenGL (required version >= 5.15.2)
 * Qt5Widgets (required version >= 5.15.2)
 * Qt5Xml (required version >= 5.15.2)
 * KF5Config (required version >= 5.107.0)
 * Qt5Core (required version >= 5.15.2)
 * KF5WidgetsAddons (required version >= 5.107.0)
 * KF5NewStuff (required version >= 5.90.0)

-- Configuring done (1.4s)
-- Generating done (0.0s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_RUNSTATEDIR
    FETCHCONTENT_FULLY_DISCONNECTED


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--strip-program=true" VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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Note: meta source : no *info/productname or alternative            kalzium
Note: meta source : see http://www.docbook.org/tdg5/en/html/produ  kalzium
Note: meta source : no refentry/refmeta/refmiscinfo@class=source   kalzium
Note: meta source : see http://www.docbook.org/tdg5/en/html/refmi  kalzium
Note: meta version: no *info/productnumber or alternative          kalzium
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Warn: meta source : no fallback for source, so inserted a fixme    kalzium
Note: meta manual : no titled ancestor of refentry                 kalzium
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Warn: meta manual : no fallback for manual, so inserted a fixme    kalzium
Warn: AUTHOR sect.: no personblurb|contrib for Ben Burton          kalzium
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Note: AUTHOR sect.: see http://www.docbook.org/tdg5/en/html/perso  kalzium
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make  -f CMakeFiles/po-pt-BR-docs-kalzium-index-cache-bz2.dir/build.make 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make  -f CMakeFiles/po-pt-BR-docs-kalzium-kalzium-1.dir/build.make 
CMakeFiles/po-pt-BR-docs-kalzium-kalzium-1.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/CMakeFiles/po-pt-BR-docs-kalzium-kalzium-1.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>> && /usr/bin/meinproc5 --check --cache 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/po/pt_BR/docs/kalzium/index.cache.bz2 
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 17%] Generating po/pt_BR/docs/kalzium/kalzium.1
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--stylesheet /usr/share/kf5/kdoctools/customization/kde-include-man.xsl --check 
/<<PKGBUILDDIR>>/po/pt_BR/docs/kalzium/man-kalzium.1.docbook
I/O warning : failed to load external entity 
"/usr/share/kf5/kdoctools/customization/xsl/pt-BR.xml"
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
Note: Writing kalzium.1
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 17%] Built target po-pt-BR-docs-kalzium-kalzium-1
make  -f CMakeFiles/po-ru-docs-kalzium-index-cache-bz2.dir/build.make 
CMakeFiles/po-ru-docs-kalzium-index-cache-bz2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> 
/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/CMakeFiles/po-ru-docs-kalzium-index-cache-bz2.dir/DependInfo.cmake "--color="
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
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No "pt_br" localization of "footer-doc-teamname" exists; using "en".
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
[ 17%] Generating po/ru/docs/kalzium/index.cache.bz2
cd /<<PKGBUILDDIR>> && /usr/bin/meinproc5 --check --cache 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/po/ru/docs/kalzium/index.cache.bz2 
po/ru/docs/kalzium/index.docbook
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
No "pt_br" localization of "footer-doc-comment" exists; using "en".
No "pt_br" localization of "footer-doc-feedback" exists; using "en".
No "pt_br" localization of "footer-doc-teamname" exists; using "en".
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make  -f CMakeFiles/po-ru-docs-kalzium-kalzium-1.dir/build.make 
CMakeFiles/po-ru-docs-kalzium-kalzium-1.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> 
/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
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make  -f CMakeFiles/po-ru-docs-kalzium-kalzium-1.dir/build.make 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 18%] Generating po/ru/docs/kalzium/kalzium.1
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/po/ru/docs/kalzium && /usr/bin/meinproc5 
--stylesheet /usr/share/kf5/kdoctools/customization/kde-include-man.xsl --check 
/<<PKGBUILDDIR>>/po/ru/docs/kalzium/man-kalzium.1.docbook
Note: meta source : no *info/productname or alternative            kalzium
Note: meta source : see http://www.docbook.org/tdg5/en/html/produ  kalzium
Note: meta source : no refentry/refmeta/refmiscinfo@class=source   kalzium
Note: meta source : see http://www.docbook.org/tdg5/en/html/refmi  kalzium
Note: meta version: no *info/productnumber or alternative          kalzium
Note: meta version: see http://www.docbook.org/tdg5/en/html/produ  kalzium
Note: meta version: no refentry/refmeta/refmiscinfo@class=version  kalzium
Note: meta version: see http://www.docbook.org/tdg5/en/html/refmi  kalzium
Warn: meta source : no fallback for source, so inserted a fixme    kalzium
Note: meta manual : no titled ancestor of refentry                 kalzium
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Warn: meta manual : no fallback for manual, so inserted a fixme    kalzium
Warn: AUTHOR sect.: no personblurb|contrib for Ben Burton          kalzium
Note: AUTHOR sect.: see http://www.docbook.org/tdg5/en/html/contr  kalzium
Note: AUTHOR sect.: see http://www.docbook.org/tdg5/en/html/perso  kalzium
Note: Writing kalzium.1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 18%] Built target po-ru-docs-kalzium-kalzium-1
make  -f CMakeFiles/po-sv-docs-kalzium-index-cache-bz2.dir/build.make 
CMakeFiles/po-sv-docs-kalzium-index-cache-bz2.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> 
/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
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/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/po/uk/docs/kalzium/index.cache.bz2 
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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/<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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/<<PKGBUILDDIR>>/po/uk/docs/kalzium/man-kalzium.1.docbook
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[ 20%] Built target po-uk-docs-kalzium-kalzium-1
make  -f compoundviewer/CMakeFiles/compoundviewer_autogen.dir/build.make 
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> 
/<<PKGBUILDDIR>>/compoundviewer /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer/CMakeFiles/compoundviewer_autogen.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
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[ 21%] Automatic MOC for target compoundviewer
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/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer/CMakeFiles/compoundviewer_autogen.dir/AutogenInfo.json
 Debian
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make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> 
/<<PKGBUILDDIR>>/doc /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc/CMakeFiles/doc-index-cache-bz2.dir/DependInfo.cmake "--color="
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating 
"SRC:/obj-x86_64-linux-gnu/compoundviewer/compoundviewer_autogen/moc_predefs.h",
 because it doesn't exist.
/usr/bin/c++ -std=gnu++14 -dM -E -c /usr/share/cmake-3.27/Modules/CMakeCXXCompilerABI.cpp -DKCOREADDONS_LIB 
-DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_NO_URL_CAST_FROM_STRING -DQT_OPENGL_LIB -DQT_WIDGETS_LIB 
-D_GNU_SOURCE -D_LARGEFILE64_SOURCE -Dcompoundviewer_EXPORTS 
-I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer -I/<<PKGBUILDDIR>>/compoundviewer 
-I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/KF5/KI18n -I/usr/include/KF5 
-I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore 
-I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/KF5/KWidgetsAddons 
-I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui 
-I/usr/include/KF5/KCoreAddons -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/openbabel3 
-I/usr/include/eigen3 -I/usr/include -I/usr/include/c++/13 -I/usr/include/x86_64-linux-gnu/c++/13 
-I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-linux-gnu/13/include -I/usr/local/include 
-I/usr/include/x86_64-linux-gnu
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make  -f doc/CMakeFiles/doc-index-cache-bz2.dir/build.make 
doc/CMakeFiles/doc-index-cache-bz2.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
AutoGen: Parsing "SRC:/compoundviewer/iowrapper.h"
AutoGen: Parsing "SRC:/compoundviewer/kalziumglwidget.h"
AutoGen: Parsing "SRC:/compoundviewer/iowrapper.cpp"
AutoGen: Parsing "SRC:/compoundviewer/kalziumglwidget.cpp"
AutoMoc: Generating 
"SRC:/obj-x86_64-linux-gnu/compoundviewer/compoundviewer_autogen/EWIEGA46WW/moc_kalziumglwidget.cpp",
 because it doesn't exist, from "SRC:/compoundviewer/kalziumglwidget.h"
/usr/lib/qt5/bin/moc -DKCOREADDONS_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_NO_URL_CAST_FROM_STRING -DQT_OPENGL_LIB -DQT_WIDGETS_LIB 
-D_GNU_SOURCE -D_LARGEFILE64_SOURCE -Dcompoundviewer_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer 
-I/<<PKGBUILDDIR>>/compoundviewer -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/usr/include/KF5/KI18n -I/usr/include/KF5 
-I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ 
-I/usr/include/KF5/KWidgetsAddons -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui 
-I/usr/include/KF5/KCoreAddons -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/openbabel3 -I/usr/include/eigen3 -I/usr/include 
-I/usr/include/c++/13 -I/usr/include/x86_64-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-linux-gnu/13/include 
-I/usr/local/include -I/usr/include/x86_64-linux-gnu --include 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer/compoundviewer_autogen/moc_predefs.h --output-dep-file -o 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/compoundviewer/compoundviewer_autogen/EWIEGA46WW/moc_kalziumglwidget.cpp 
/<<PKGBUILDDIR>>/compoundviewer/kalziumglwidget.h
[ 21%] Generating index.cache.bz2
cd /<<PKGBUILDDIR>>/doc && /usr/bin/meinproc5 --check --cache 
/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/doc//index.cache.bz2 index.docbook
AutoMoc: Reading dependencies from 
"SRC:/obj-x86_64-linux-gnu/compoundviewer/compoundviewer_autogen/EWIEGA46WW/moc_kalziumglwidget.cpp.d"
AutoMoc: Generating MOC compilation 
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-DQT_NO_URL_CAST_FROM_STRING -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -Dcompoundviewer_EXPORTS 
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-isystem /usr/include/KF5/KI18n -isystem /usr/include/KF5 -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem 
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`IoWrapper::writeMolecule(QString const&, Avogadro::Core::Molecule*)':
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./obj-x86_64-linux-gnu/compoundviewer/./compoundviewer/iowrapper.cpp:58:(.text+0xf4d): 
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-isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/KF5/KWidgetsAddons -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem 
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/usr/lib/x86_64-linux-gnu/libKF5UnitConversion.so.5.107.0 
/usr/lib/x86_64-linux-gnu/libKF5WidgetsAddons.so.5.107.0 
/usr/lib/x86_64-linux-gnu/libKF5I18n.so.5.107.0 
/usr/lib/x86_64-linux-gnu/libQt5Widgets.so.5.15.10 
/usr/lib/x86_64-linux-gnu/libQt5Gui.so.5.15.10 
/usr/lib/x86_64-linux-gnu/libQt5Xml.so.5.15.10 
/usr/lib/x86_64-linux-gnu/libQt5Core.so.5.15.10
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/libscience && /usr/bin/cmake -E 
cmake_symlink_library ../bin/libscience.so.5.0.0 ../bin/libscience.so.5 ../bin/libscience.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 33%] Built target science
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make[1]: *** [Makefile:149: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j2 "INSTALL=install 
--strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202312/

About the archive rebuild: The build was made using virtual machines
from AWS, with enough memory, enough disk, and either one or two
CPUs, using a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks.

--- End Message ---
--- Begin Message --- 
Source: kalzium
Source-Version: 4:23.08.5-1
Done: Patrick Franz <delta...@debian.org>

We believe that the bug you reported is fixed in the latest version of
kalzium, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1057...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Patrick Franz <delta...@debian.org> (supplier of updated kalzium package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 13 Apr 2024 20:29:33 +0200
Source: kalzium
Architecture: source
Version: 4:23.08.5-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Qt/KDE Maintainers <debian-qt-...@lists.debian.org>
Changed-By: Patrick Franz <delta...@debian.org>
Closes: 1057565
Changes:
 kalzium (4:23.08.5-1) unstable; urgency=medium
 .
   * Team upload.
 .
   [ Jesse Rhodes ]
   * New upstream release (23.08.5). (Closes: #1057565)
   * Update build-deps with info from cmake.
   * Depend on pkgconf instead of pkg-config transitional package.
   * Refresh patches.
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kalzium_23.08.5-1_source.buildinfo
Checksums-Sha256:
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kalzium_23.08.5-1.dsc
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 b4e9baf9400a038deb1b532319ac6b1b1d91de67af31b38a89118198c751e2f3 21716 
kalzium_23.08.5-1.debian.tar.xz
 c57881239e76b37074d28f137712d040ea19c591a787e9ee77a739d8efe3198e 13463 
kalzium_23.08.5-1_source.buildinfo
Files:
 e17139067407f59a3f375f045f39b692 2981 kde optional kalzium_23.08.5-1.dsc
 9bf41e0e6eb3e180a9906d861c2c2756 24641244 kde optional 
kalzium_23.08.5.orig.tar.xz
 dcffad04dda614c0e0548319109cf40a 833 kde optional 
kalzium_23.08.5.orig.tar.xz.asc
 eb999bd163b41582750ef8f82be436a2 21716 kde optional 
kalzium_23.08.5-1.debian.tar.xz
 ccf0c5a8a511f2b92dd553374b8d0800 13463 kde optional 
kalzium_23.08.5-1_source.buildinfo

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--- End Message ---

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