Your message dated Thu, 25 Feb 2016 21:23:52 +0000
with message-id <e1az3o4-0008id...@franck.debian.org>
and subject line Bug#815824: fixed in gerris 20131206+dfsg-7
has caused the Debian Bug report #815824,
regarding gerris: build_function uses wrong compiler
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
815824: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=815824
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: gerris
Version: 20131206+dfsg-5
Severity: grave
Tags: patch
Justification: renders package unusable
Dear Maintainer,
Gerris uses compilation in the background to evaluate user-defined functions in
parameter files. This is done through the /usr/share/gerris/build_function
script. Currently, the "serial" gerris package includes a build_function script
which uses 'mpicc' to compile, but mpicc is not a dependency of the package
(because the gerris executable itself is serial, not parallel). This causes all
user-defined functions to fail and thus very seriously limits the usability of
the package.
To reproduce the bug you can do
% wget
http://gerris.dalembert.upmc.fr/gerris/examples/examples/boussinesq/boussinesq.gfs
% gerris2D boussinesq.gfs
which will give
gerris: file `boussinesq.gfs' is not a valid simulation file
boussinesq.gfs:61:74: error compiling expression
/usr/share/gerris/build_function: 28: /usr/share/gerris/build_function: mpicc:
not found
The fix is simple, just replace 'mpicc' with 'gcc' on lines 7 and 8 of
/usr/share/gerris/build_function.
thanks for packaging Gerris!
Stephane
-- System Information:
Debian Release: 8.3
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 3.16.0-4-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages gerris depends on:
ii libav-tools 6:11.4-1~deb8u1
ii libc6 2.19-18+deb8u3
ii libgcc1 1:4.9.2-10
ii libgfortran3 4.9.2-10
ii libgfs-1.3-2 20131206+dfsg-5
ii libgfs-dev 20131206+dfsg-5
ii libglib2.0-0 2.42.1-1
ii libgts-0.7-5 0.7.6+darcs121130-1.2
ii libgts-dev 0.7.6+darcs121130-1.2
ii libquadmath0 4.9.2-10
Versions of packages gerris recommends:
ii gfsview 20121130+dfsg-1
Versions of packages gerris suggests:
ii python 2.7.9-1
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: gerris
Source-Version: 20131206+dfsg-7
We believe that the bug you reported is fixed in the latest version of
gerris, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 815...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Anton Gladky <gl...@debian.org> (supplier of updated gerris package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 25 Feb 2016 21:10:50 +0100
Source: gerris
Binary: gerris gerris-mpi libgfs-1.3-2 libgfs-dbg libgfs-dev libgfs-mpi-1.3-2
libgfs-mpi-dev
Architecture: source
Version: 20131206+dfsg-7
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<debian-science-maintainers@lists.alioth.debian.org>
Changed-By: Anton Gladky <gl...@debian.org>
Description:
gerris - Fluid Flow Solver
gerris-mpi - Fluid Flow Solver
libgfs-1.3-2 - Fluid Flow Solver -- shared libraries
libgfs-dbg - Fluid Flow Solver -- libraries with debugging symbols
libgfs-dev - Fluid Flow Solver -- development libraries and headers
libgfs-mpi-1.3-2 - Fluid Flow Solver -- shared libraries
libgfs-mpi-dev - Fluid Flow Solver -- development libraries and headers
Closes: 815824
Changes:
gerris (20131206+dfsg-7) unstable; urgency=medium
.
* [43c738d] Fix compiler in build_function. (Closes: #815824)
Checksums-Sha1:
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41b36cfaa2f9e9f6d6a87940b2ae3a84fa2ec099 17092
gerris_20131206+dfsg-7.debian.tar.xz
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gerris_20131206+dfsg-7.debian.tar.xz
Files:
aa3890c54a78f0c084dbc6fdd90ee010 2555 science optional
gerris_20131206+dfsg-7.dsc
6b563bcbb0cbd1ca5963abae4773a067 17092 science optional
gerris_20131206+dfsg-7.debian.tar.xz
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