Andrew Davidson created SPARK-15506:
---------------------------------------
Summary: only one notebook can define a UDF;
java.sql.SQLException: Another instance of Derby may have already booted the
database
Key: SPARK-15506
URL: https://issues.apache.org/jira/browse/SPARK-15506
Project: Spark
Issue Type: Bug
Components: PySpark
Affects Versions: 1.6.1
Environment: Mac OSX El Captain
Python 3.4.2
Reporter: Andrew Davidson
I am using a sqlContext to create dataframes. I noticed that if I open up and
run 'notebook a' and 'a' defines a udf. That I will not be able to open a
second notebook that also defines a udf unless I shut down notebook a first.
In the second notebook I get a big long stack trace. The problem seems to be
Caused by: java.sql.SQLException: Another instance of Derby may have already
booted the database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown
Source)
... 86 more
Here is the complete stack track
Kind regards
Andy
You must build Spark with Hive. Export 'SPARK_HIVE=true' and run build/sbt
assembly
---------------------------------------------------------------------------
Py4JJavaError Traceback (most recent call last)
<ipython-input-3-b1a7a3f894c5> in <module>()
16 #fooUDF = udf(lambda arg : "aedwip")
17
---> 18 paddedStrUDF = udf(lambda zipInt : str(zipInt).zfill(5))
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/functions.py
in udf(f, returnType)
1595 [Row(slen=5), Row(slen=3)]
1596 """
-> 1597 return UserDefinedFunction(f, returnType)
1598
1599 blacklist = ['map', 'since', 'ignore_unicode_prefix']
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/functions.py
in __init__(self, func, returnType, name)
1556 self.returnType = returnType
1557 self._broadcast = None
-> 1558 self._judf = self._create_judf(name)
1559
1560 def _create_judf(self, name):
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/functions.py
in _create_judf(self, name)
1567 pickled_command, broadcast_vars, env, includes =
_prepare_for_python_RDD(sc, command, self)
1568 ctx = SQLContext.getOrCreate(sc)
-> 1569 jdt = ctx._ssql_ctx.parseDataType(self.returnType.json())
1570 if name is None:
1571 name = f.__name__ if hasattr(f, '__name__') else
f.__class__.__name__
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/context.py
in _ssql_ctx(self)
681 try:
682 if not hasattr(self, '_scala_HiveContext'):
--> 683 self._scala_HiveContext = self._get_hive_ctx()
684 return self._scala_HiveContext
685 except Py4JError as e:
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/context.py
in _get_hive_ctx(self)
690
691 def _get_hive_ctx(self):
--> 692 return self._jvm.HiveContext(self._jsc.sc())
693
694 def refreshTable(self, tableName):
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/lib/py4j-0.9-src.zip/py4j/java_gateway.py
in __call__(self, *args)
1062 answer = self._gateway_client.send_command(command)
1063 return_value = get_return_value(
-> 1064 answer, self._gateway_client, None, self._fqn)
1065
1066 for temp_arg in temp_args:
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/pyspark/sql/utils.py
in deco(*a, **kw)
43 def deco(*a, **kw):
44 try:
---> 45 return f(*a, **kw)
46 except py4j.protocol.Py4JJavaError as e:
47 s = e.java_exception.toString()
/Users/andrewdavidson/workSpace/spark/spark-1.6.1-bin-hadoop2.6/python/lib/py4j-0.9-src.zip/py4j/protocol.py
in get_return_value(answer, gateway_client, target_id, name)
306 raise Py4JJavaError(
307 "An error occurred while calling {0}{1}{2}.\n".
--> 308 format(target_id, ".", name), value)
309 else:
310 raise Py4JError(
Py4JJavaError: An error occurred while calling
None.org.apache.spark.sql.hive.HiveContext.
: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at
org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522)
at
org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:204)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:249)
at
org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:327)
at
org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:237)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:441)
at
org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:226)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:101)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:234)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:381)
at py4j.Gateway.invoke(Gateway.java:214)
at
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:79)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:68)
at py4j.GatewayConnection.run(GatewayConnection.java:209)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.RuntimeException: Unable to instantiate
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at
org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at
org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at
org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
... 23 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
... 29 more
Caused by: javax.jdo.JDOFatalDataStoreException: Unable to open a test
connection to the given database. JDBC url =
jdbc:derby:;databaseName=metastore_db;create=true, username = APP. Terminating
connection pool (set lazyInit to true if you expect to start your database
after your app). Original Exception: ------
java.sql.SQLException: Failed to start database 'metastore_db' with class
loader org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e,
see the next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.seeNextException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.bootDatabase(Unknown
Source)
at org.apache.derby.impl.jdbc.EmbedConnection.<init>(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection40.<init>(Unknown Source)
at org.apache.derby.jdbc.Driver40.getNewEmbedConnection(Unknown Source)
at org.apache.derby.jdbc.InternalDriver.connect(Unknown Source)
at org.apache.derby.jdbc.Driver20.connect(Unknown Source)
at org.apache.derby.jdbc.AutoloadedDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at
com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at
org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:501)
at
org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:298)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at
org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at
org.datanucleus.NucleusContext.createStoreManagerForProperties(NucleusContext.java:1187)
at org.datanucleus.NucleusContext.initialise(NucleusContext.java:356)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:775)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at
javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at
org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at
org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at
org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at
org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:624)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at
org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at
org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at
org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at
org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at
org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:204)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:249)
at
org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:327)
at
org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:237)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:441)
at
org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:226)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:101)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:234)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:381)
at py4j.Gateway.invoke(Gateway.java:214)
at
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:79)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:68)
at py4j.GatewayConnection.run(GatewayConnection.java:209)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.sql.SQLException: Failed to start database 'metastore_db' with
class loader
org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e, see the
next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
... 89 more
Caused by: java.sql.SQLException: Another instance of Derby may have already
booted the database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown
Source)
... 86 more
Caused by: ERROR XSDB6: Another instance of Derby may have already booted the
database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at org.apache.derby.iapi.error.StandardException.newException(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.privGetJBMSLockOnDB(Unknown
Source)
at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.run(Unknown
Source)
at java.security.AccessController.doPrivileged(Native Method)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.getJBMSLockOnDB(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.raw.RawStore.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.access.RAMAccessManager.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.bootStore(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.bootService(Unknown Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startProviderService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.findProviderAndStartService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startPersistentService(Unknown
Source)
at
org.apache.derby.iapi.services.monitor.Monitor.startPersistentService(Unknown
Source)
... 86 more
------
NestedThrowables:
java.sql.SQLException: Unable to open a test connection to the given database.
JDBC url = jdbc:derby:;databaseName=metastore_db;create=true, username = APP.
Terminating connection pool (set lazyInit to true if you expect to start your
database after your app). Original Exception: ------
java.sql.SQLException: Failed to start database 'metastore_db' with class
loader org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e,
see the next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.seeNextException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.bootDatabase(Unknown
Source)
at org.apache.derby.impl.jdbc.EmbedConnection.<init>(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection40.<init>(Unknown Source)
at org.apache.derby.jdbc.Driver40.getNewEmbedConnection(Unknown Source)
at org.apache.derby.jdbc.InternalDriver.connect(Unknown Source)
at org.apache.derby.jdbc.Driver20.connect(Unknown Source)
at org.apache.derby.jdbc.AutoloadedDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at
com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at
org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:501)
at
org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:298)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at
org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at
org.datanucleus.NucleusContext.createStoreManagerForProperties(NucleusContext.java:1187)
at org.datanucleus.NucleusContext.initialise(NucleusContext.java:356)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:775)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at
javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at
org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at
org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at
org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at
org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:624)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at
org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at
org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at
org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at
org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at
org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:204)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:249)
at
org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:327)
at
org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:237)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:441)
at
org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:226)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:101)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:234)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:381)
at py4j.Gateway.invoke(Gateway.java:214)
at
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:79)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:68)
at py4j.GatewayConnection.run(GatewayConnection.java:209)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.sql.SQLException: Failed to start database 'metastore_db' with
class loader
org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e, see the
next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
... 89 more
Caused by: java.sql.SQLException: Another instance of Derby may have already
booted the database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown
Source)
... 86 more
Caused by: ERROR XSDB6: Another instance of Derby may have already booted the
database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at org.apache.derby.iapi.error.StandardException.newException(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.privGetJBMSLockOnDB(Unknown
Source)
at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.run(Unknown
Source)
at java.security.AccessController.doPrivileged(Native Method)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.getJBMSLockOnDB(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.raw.RawStore.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.access.RAMAccessManager.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.bootStore(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.bootService(Unknown Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startProviderService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.findProviderAndStartService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startPersistentService(Unknown
Source)
at
org.apache.derby.iapi.services.monitor.Monitor.startPersistentService(Unknown
Source)
... 86 more
------
at
org.datanucleus.api.jdo.NucleusJDOHelper.getJDOExceptionForNucleusException(NucleusJDOHelper.java:436)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:788)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at
javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at
org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at
org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at
org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at
org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:624)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at
org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at
org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
... 34 more
Caused by: java.sql.SQLException: Unable to open a test connection to the given
database. JDBC url = jdbc:derby:;databaseName=metastore_db;create=true,
username = APP. Terminating connection pool (set lazyInit to true if you expect
to start your database after your app). Original Exception: ------
java.sql.SQLException: Failed to start database 'metastore_db' with class
loader org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e,
see the next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.seeNextException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.bootDatabase(Unknown
Source)
at org.apache.derby.impl.jdbc.EmbedConnection.<init>(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection40.<init>(Unknown Source)
at org.apache.derby.jdbc.Driver40.getNewEmbedConnection(Unknown Source)
at org.apache.derby.jdbc.InternalDriver.connect(Unknown Source)
at org.apache.derby.jdbc.Driver20.connect(Unknown Source)
at org.apache.derby.jdbc.AutoloadedDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
at
com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at
org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:501)
at
org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:298)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at
org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at
org.datanucleus.NucleusContext.createStoreManagerForProperties(NucleusContext.java:1187)
at org.datanucleus.NucleusContext.initialise(NucleusContext.java:356)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:775)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at
javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at
org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at
org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at
org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at
org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at
org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at
org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:624)
at
org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at
org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at
org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at
org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at
org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at
org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at
org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at
org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at
org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:204)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:249)
at
org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:327)
at
org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:237)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:441)
at
org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:226)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:229)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:101)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:234)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:381)
at py4j.Gateway.invoke(Gateway.java:214)
at
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:79)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:68)
at py4j.GatewayConnection.run(GatewayConnection.java:209)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.sql.SQLException: Failed to start database 'metastore_db' with
class loader
org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e, see the
next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
... 89 more
Caused by: java.sql.SQLException: Another instance of Derby may have already
booted the database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown
Source)
... 86 more
Caused by: ERROR XSDB6: Another instance of Derby may have already booted the
database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at org.apache.derby.iapi.error.StandardException.newException(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.privGetJBMSLockOnDB(Unknown
Source)
at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.run(Unknown
Source)
at java.security.AccessController.doPrivileged(Native Method)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.getJBMSLockOnDB(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.raw.RawStore.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.access.RAMAccessManager.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.bootStore(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.bootService(Unknown Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startProviderService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.findProviderAndStartService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startPersistentService(Unknown
Source)
at
org.apache.derby.iapi.services.monitor.Monitor.startPersistentService(Unknown
Source)
... 86 more
------
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at com.jolbox.bonecp.PoolUtil.generateSQLException(PoolUtil.java:192)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:422)
at
com.jolbox.bonecp.BoneCPDataSource.getConnection(BoneCPDataSource.java:120)
at
org.datanucleus.store.rdbms.ConnectionFactoryImpl$ManagedConnectionImpl.getConnection(ConnectionFactoryImpl.java:501)
at
org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:298)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at
org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at
org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at
org.datanucleus.NucleusContext.createStoreManagerForProperties(NucleusContext.java:1187)
at org.datanucleus.NucleusContext.initialise(NucleusContext.java:356)
at
org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:775)
... 63 more
Caused by: java.sql.SQLException: Failed to start database 'metastore_db' with
class loader
org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e, see the
next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.seeNextException(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection.bootDatabase(Unknown
Source)
at org.apache.derby.impl.jdbc.EmbedConnection.<init>(Unknown Source)
at org.apache.derby.impl.jdbc.EmbedConnection40.<init>(Unknown Source)
at org.apache.derby.jdbc.Driver40.getNewEmbedConnection(Unknown Source)
at org.apache.derby.jdbc.InternalDriver.connect(Unknown Source)
at org.apache.derby.jdbc.Driver20.connect(Unknown Source)
at org.apache.derby.jdbc.AutoloadedDriver.connect(Unknown Source)
at java.sql.DriverManager.getConnection(DriverManager.java:664)
at java.sql.DriverManager.getConnection(DriverManager.java:208)
at com.jolbox.bonecp.BoneCP.obtainRawInternalConnection(BoneCP.java:361)
at com.jolbox.bonecp.BoneCP.<init>(BoneCP.java:416)
... 75 more
Caused by: java.sql.SQLException: Failed to start database 'metastore_db' with
class loader
org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@3960aa4e, see the
next exception for details.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
... 89 more
Caused by: java.sql.SQLException: Another instance of Derby may have already
booted the database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at
org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
Source)
at
org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown Source)
at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown
Source)
... 86 more
Caused by: ERROR XSDB6: Another instance of Derby may have already booted the
database
/Users/andrewdavidson/workSpace/bigPWSWorkspace/dataScience/notebooks/gnip/metastore_db.
at org.apache.derby.iapi.error.StandardException.newException(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.privGetJBMSLockOnDB(Unknown
Source)
at org.apache.derby.impl.store.raw.data.BaseDataFileFactory.run(Unknown
Source)
at java.security.AccessController.doPrivileged(Native Method)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.getJBMSLockOnDB(Unknown
Source)
at
org.apache.derby.impl.store.raw.data.BaseDataFileFactory.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.raw.RawStore.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.store.access.RAMAccessManager.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startModule(Unknown Source)
at
org.apache.derby.iapi.services.monitor.Monitor.bootServiceModule(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.bootStore(Unknown Source)
at org.apache.derby.impl.db.BasicDatabase.boot(Unknown Source)
at org.apache.derby.impl.services.monitor.BaseMonitor.boot(Unknown
Source)
at org.apache.derby.impl.services.monitor.TopService.bootModule(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.bootService(Unknown Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startProviderService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.findProviderAndStartService(Unknown
Source)
at
org.apache.derby.impl.services.monitor.BaseMonitor.startPersistentService(Unknown
Source)
at
org.apache.derby.iapi.services.monitor.Monitor.startPersistentService(Unknown
Source)
... 86 more
--
This message was sent by Atlassian JIRA
(v6.3.4#6332)
---------------------------------------------------------------------
To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org
For additional commands, e-mail: issues-h...@spark.apache.org
