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commit f4e207bd1210b92c5f05733d4b22f8c7deb4ef22
Author: Onkar Shinde <onkarshi...@ubuntu.com>
Date: Thu Apr 28 17:38:40 2011 +0000
Prepared 1.2.8-1 release
---
debian/changelog | 13 +
debian/control | 2 +-
debian/patches/21_vecmath_lib_name.patch | 430 +++++++++++++--------------
debian/patches/22_fix_build.patch | 488 +++++++++++++++----------------
debian/watch | 2 +-
5 files changed, 469 insertions(+), 466 deletions(-)
diff --git a/debian/changelog b/debian/changelog
index 96f853f..ff93644 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,16 @@
+cdk (1:1.2.8-1) unstable; urgency=low
+
+ * New upstream release.
+ * debian/control
+ - Fix value of 'Vcs-Browser' to make it useful.
+ * debian/patches
+ - 21_vecmath_lib_name.patch, 22_fix_build.patch - Updated to use wildcards
+ for jar file names. Forwarded relevant bits upstream.
+ * debian/watch
+ - Improved regular expression to watch future stable versions.
+
+ -- Onkar Shinde <onkarshi...@ubuntu.com> Thu, 28 Apr 2011 20:48:38 +0530
+
cdk (1:1.2.7-1) unstable; urgency=low
* New upstream release. (Closes: #519969)
diff --git a/debian/control b/debian/control
index 8fcd2eb..ec06427 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,7 @@ Build-Depends: cdbs, debhelper (>= 7), default-jdk, ant-optional
Build-Depends-Indep: ant-contrib, antlr, docbook-xsl (>= 1.66.1), javacc,
libcommons-cli-java, libcrimson-java, liblog4j1.2-java, libmysql-java,
libpgjava, libxerces2-java, xsltproc, libjgrapht0.6-java-link, libvecmath-java,
libxom-java, libjama-java, libxpp3-java, r-cran-rjava
Standards-Version: 3.9.1
Vcs-Svn: svn://svn.debian.org/svn/pkg-java/trunk/cdk
-Vcs-Browser: http://svn.debian.org/wsvn/pkg-java/trunk/cdk
+Vcs-Browser: http://svn.debian.org/wsvn/pkg-java/trunk/cdk/#_trunk_cdk_
Homepage: http://cdk.sourceforge.net/
Package: libcdk-java
diff --git a/debian/patches/21_vecmath_lib_name.patch
b/debian/patches/21_vecmath_lib_name.patch
index cf610ca..49db095 100644
--- a/debian/patches/21_vecmath_lib_name.patch
+++ b/debian/patches/21_vecmath_lib_name.patch
@@ -1,8 +1,8 @@
-Description: Change vecmath1.2.jar references to vecmath.jar fix the build.
-Forwarded: not-needed
+Description: Change vecmath1.2.jar references to vecmath*.jar to fix the build.
+Forwarded:
https://sourceforge.net/tracker/?func=detail&aid=3294458&group_id=20024&atid=320024
Author: Onkar Shinde <onshi...@ubuntu.com>
---- a/build.xml 2011-03-27 14:22:10.000000000 +0530
-+++ b/build.xml 2011-03-27 14:23:58.000000000 +0530
+--- a/build.xml 2011-04-19 09:35:32.000000000 +0530
++++ b/build.xml 2011-04-19 09:36:00.000000000 +0530
@@ -131,7 +131,7 @@
<!-- test for optional jars -->
@@ -21,502 +21,502 @@ Author: Onkar Shinde <onshi...@ubuntu.com>
<pathelement path="${dist}/jar/cdk-builder3dtools.jar" />
<pathelement path="${dist}/jar/cdk-interfaces.jar" />
<pathelement path="${dist}/jar/cdk-nonotify.jar" />
---- a/src/META-INF/builder3d.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/builder3d.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/builder3d.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/builder3d.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1,3 +1,3 @@
jama-1.0.2.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/builder3dtools.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/builder3dtools.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/builder3dtools.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/builder3dtools.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/charges.libdepends 2011-03-27 14:22:03.000000000 +0530
-+++ b/src/META-INF/charges.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/charges.libdepends 2011-04-19 09:35:36.000000000 +0530
++++ b/src/META-INF/charges.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/control.libdepends 2011-03-27 14:22:04.000000000 +0530
-+++ b/src/META-INF/control.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/control.libdepends 2011-04-19 09:35:37.000000000 +0530
++++ b/src/META-INF/control.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/datadebug.libdepends 2011-03-27 14:22:00.000000000
+0530
-+++ b/src/META-INF/datadebug.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/datadebug.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/datadebug.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/data.libdepends 2011-03-27 14:22:00.000000000 +0530
-+++ b/src/META-INF/data.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/data.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/data.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/extra.libdepends 2011-03-27 14:21:59.000000000 +0530
-+++ b/src/META-INF/extra.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/extra.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/extra.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,3 +1,3 @@
jama-1.0.2.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/forcefield.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/forcefield.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/forcefield.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/forcefield.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1,3 +1,3 @@
jama-1.0.2.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/inchi.libdepends 2011-03-27 14:22:04.000000000 +0530
-+++ b/src/META-INF/inchi.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/inchi.libdepends 2011-04-19 09:35:37.000000000 +0530
++++ b/src/META-INF/inchi.libdepends 2011-04-19 09:36:04.000000000 +0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
jniinchi-0.5.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/interfaces.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/interfaces.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/interfaces.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/interfaces.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/io.libdepends 2011-03-27 14:22:04.000000000 +0530
-+++ b/src/META-INF/io.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/io.libdepends 2011-04-19 09:35:37.000000000 +0530
++++ b/src/META-INF/io.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xpp3-1.1.4c.jar
---- a/src/META-INF/nonotify.libdepends 2011-03-27 14:22:01.000000000 +0530
-+++ b/src/META-INF/nonotify.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/nonotify.libdepends 2011-04-19 09:35:35.000000000 +0530
++++ b/src/META-INF/nonotify.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/pdb.libdepends 2011-03-27 14:21:59.000000000 +0530
-+++ b/src/META-INF/pdb.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/pdb.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/pdb.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/qsar.libdepends 2011-03-27 14:22:01.000000000 +0530
-+++ b/src/META-INF/qsar.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/qsar.libdepends 2011-04-19 09:35:35.000000000 +0530
++++ b/src/META-INF/qsar.libdepends 2011-04-19 09:36:03.000000000 +0530
@@ -2,5 +2,5 @@
JRI.jar
jgrapht-0.6.0.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/reaction.libdepends 2011-03-27 14:22:00.000000000 +0530
-+++ b/src/META-INF/reaction.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/reaction.libdepends 2011-04-19 09:35:34.000000000 +0530
++++ b/src/META-INF/reaction.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,5 +1,5 @@
log4j.jar
jgrapht-0.6.0.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/render.libdepends 2011-03-27 14:21:58.000000000 +0530
-+++ b/src/META-INF/render.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/render.libdepends 2011-04-19 09:35:32.000000000 +0530
++++ b/src/META-INF/render.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/sdg.libdepends 2011-03-27 14:22:02.000000000 +0530
-+++ b/src/META-INF/sdg.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/sdg.libdepends 2011-04-19 09:35:35.000000000 +0530
++++ b/src/META-INF/sdg.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/smiles.libdepends 2011-03-27 14:22:03.000000000 +0530
-+++ b/src/META-INF/smiles.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/smiles.libdepends 2011-04-19 09:35:36.000000000 +0530
++++ b/src/META-INF/smiles.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/standard.libdepends 2011-03-27 14:22:00.000000000 +0530
-+++ b/src/META-INF/standard.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/standard.libdepends 2011-04-19 09:35:34.000000000 +0530
++++ b/src/META-INF/standard.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-builder3d.libdepends 2011-03-27 14:22:04.000000000
+0530
-+++ b/src/META-INF/test-builder3d.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-builder3d.libdepends 2011-04-19 09:35:37.000000000
+0530
++++ b/src/META-INF/test-builder3d.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,4 +1,4 @@
jama-1.0.2.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-core.libdepends 2011-03-27 14:22:04.000000000
+0530
-+++ b/src/META-INF/test-core.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-core.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-core.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,3 +1,3 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-datadebug.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-datadebug.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-datadebug.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-datadebug.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,2 +1,2 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-data.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-data.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-data.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-data.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,2 +1,2 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-extra.libdepends 2011-03-27 14:22:04.000000000
+0530
-+++ b/src/META-INF/test-extra.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-extra.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-extra.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -3,5 +3,5 @@
cmlxom-2.5-b1.jar
log4j.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/test-forcefield.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/test-forcefield.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-forcefield.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/test-forcefield.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,4 +1,4 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-inchi.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-inchi.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-inchi.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-inchi.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
jniinchi-0.5.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/test-io.libdepends 2011-03-27 14:22:02.000000000 +0530
-+++ b/src/META-INF/test-io.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/test-io.libdepends 2011-04-19 09:35:35.000000000 +0530
++++ b/src/META-INF/test-io.libdepends 2011-04-19 09:36:03.000000000 +0530
@@ -1,6 +1,6 @@
jgrapht-0.6.0.jar
cmlxom-2.5-b1.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
xpp3-1.1.4c.jar
---- a/src/META-INF/test.libdepends 2011-03-27 14:21:58.000000000 +0530
-+++ b/src/META-INF/test.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/test.libdepends 2011-04-19 09:35:32.000000000 +0530
++++ b/src/META-INF/test.libdepends 2011-04-19 09:36:01.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
---- a/src/META-INF/test-libiomd.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/test-libiomd.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-libiomd.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/test-libiomd.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
cmlxom-2.5-b1.jar
xom-1.1.jar
---- a/src/META-INF/test-nonotify.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/test-nonotify.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-nonotify.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/test-nonotify.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,2 +1,2 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-pdb.libdepends 2011-03-27 14:21:59.000000000 +0530
-+++ b/src/META-INF/test-pdb.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/test-pdb.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/test-pdb.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-qsar.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/test-qsar.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-qsar.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-qsar.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-reaction.libdepends 2011-03-27 14:22:00.000000000
+0530
-+++ b/src/META-INF/test-reaction.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-reaction.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/test-reaction.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/test-smiles.libdepends 2011-03-27 14:22:04.000000000
+0530
-+++ b/src/META-INF/test-smiles.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-smiles.libdepends 2011-04-19 09:35:37.000000000
+0530
++++ b/src/META-INF/test-smiles.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,5 +1,5 @@
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/test-standard.libdepends 2011-03-27 14:22:02.000000000
+0530
-+++ b/src/META-INF/test-standard.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-standard.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/test-standard.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,5 +1,5 @@
log4j.jar
jgrapht-0.6.0.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
cmlxom-2.5-b1.jar
xom-1.1.jar
---- a/src/META-INF/test-structgen.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-structgen.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-structgen.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-structgen.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,3 +1,3 @@
log4j.jar
jgrapht-0.6.0.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-valencycheck.libdepends 2011-03-27
14:21:58.000000000 +0530
-+++ b/src/META-INF/test-valencycheck.libdepends 2011-03-27
14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/test-valencycheck.libdepends 2011-04-19
09:35:32.000000000 +0530
++++ b/src/META-INF/test-valencycheck.libdepends 2011-04-19
09:36:01.000000000 +0530
@@ -1,3 +1,3 @@
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/valencycheck.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/valencycheck.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/valencycheck.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/valencycheck.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/diff.libdepends 2011-03-27 14:22:02.000000000 +0530
-+++ b/src/META-INF/diff.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/diff.libdepends 2011-04-19 09:35:35.000000000 +0530
++++ b/src/META-INF/diff.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/fingerprint.libdepends 2011-03-27 14:22:00.000000000
+0530
-+++ b/src/META-INF/fingerprint.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/fingerprint.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/fingerprint.libdepends 2011-04-19 09:35:46.000000000
+0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/formula.libdepends 2011-03-27 14:22:00.000000000 +0530
-+++ b/src/META-INF/formula.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/formula.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/formula.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
---- a/src/META-INF/isomorphism.libdepends 2011-03-27 14:22:02.000000000
+0530
-+++ b/src/META-INF/isomorphism.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/isomorphism.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/isomorphism.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/libiocml.libdepends 2011-03-27 14:22:00.000000000 +0530
-+++ b/src/META-INF/libiocml.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/libiocml.libdepends 2011-04-19 09:35:34.000000000 +0530
++++ b/src/META-INF/libiocml.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/pcore.libdepends 2011-03-27 14:21:59.000000000 +0530
-+++ b/src/META-INF/pcore.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/pcore.libdepends 2011-04-19 09:35:33.000000000 +0530
++++ b/src/META-INF/pcore.libdepends 2011-04-19 09:36:02.000000000 +0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/qm.libdepends 2011-03-27 14:22:03.000000000 +0530
-+++ b/src/META-INF/qm.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/qm.libdepends 2011-04-19 09:35:36.000000000 +0530
++++ b/src/META-INF/qm.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/qsaratomic.libdepends 2011-03-27 14:22:01.000000000
+0530
-+++ b/src/META-INF/qsaratomic.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/qsaratomic.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/qsaratomic.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -2,5 +2,5 @@
JRI.jar
jgrapht-0.6.0.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/qsarbond.libdepends 2011-03-27 14:22:03.000000000 +0530
-+++ b/src/META-INF/qsarbond.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/qsarbond.libdepends 2011-04-19 09:35:36.000000000 +0530
++++ b/src/META-INF/qsarbond.libdepends 2011-04-19 09:36:04.000000000 +0530
@@ -2,5 +2,5 @@
JRI.jar
jgrapht-0.6.0.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/qsarmolecular.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/qsarmolecular.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/qsarmolecular.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/qsarmolecular.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -2,5 +2,5 @@
JRI.jar
jgrapht-0.6.0.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/qsarprotein.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/qsarprotein.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/qsarprotein.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/qsarprotein.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -2,5 +2,5 @@
JRI.jar
jgrapht-0.6.0.jar
sjava-0.68.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/smarts.libdepends 2011-03-27 14:22:04.000000000 +0530
-+++ b/src/META-INF/smarts.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/smarts.libdepends 2011-04-19 09:35:36.000000000 +0530
++++ b/src/META-INF/smarts.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-atomtype.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/test-atomtype.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-atomtype.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/test-atomtype.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,3 +1,3 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-charges.libdepends 2011-03-27 14:22:02.000000000
+0530
-+++ b/src/META-INF/test-charges.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-charges.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/test-charges.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-diff.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/test-diff.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-diff.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-diff.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
---- a/src/META-INF/test-fingerprint.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/test-fingerprint.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-fingerprint.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/test-fingerprint.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
jgrapht-0.6.0.jar
log4j.jar
---- a/src/META-INF/test-formula.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-formula.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-formula.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-formula.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/test-interfaces.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/test-interfaces.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-interfaces.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-interfaces.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,2 +1,2 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
---- a/src/META-INF/test-ioformats.libdepends 2011-03-27 14:22:03.000000000
+0530
-+++ b/src/META-INF/test-ioformats.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-ioformats.libdepends 2011-04-19 09:35:36.000000000
+0530
++++ b/src/META-INF/test-ioformats.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,6 +1,6 @@
jgrapht-0.6.0.jar
cmlxom-2.5-b1.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
xpp3-1.1.4c.jar
---- a/src/META-INF/test-ionpot.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-ionpot.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-ionpot.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-ionpot.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/test-isomorphism.libdepends 2011-03-27 14:21:59.000000000
+0530
-+++ b/src/META-INF/test-isomorphism.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-isomorphism.libdepends 2011-04-19 09:35:33.000000000
+0530
++++ b/src/META-INF/test-isomorphism.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,3 +1,3 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-libiocml.libdepends 2011-03-27 14:22:05.000000000
+0530
-+++ b/src/META-INF/test-libiocml.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-libiocml.libdepends 2011-04-19 09:35:37.000000000
+0530
++++ b/src/META-INF/test-libiocml.libdepends 2011-04-19 09:36:05.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
cmlxom-2.5-b1.jar
xom-1.1.jar
---- a/src/META-INF/test-pcore.libdepends 2011-03-27 14:22:00.000000000
+0530
-+++ b/src/META-INF/test-pcore.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-pcore.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/test-pcore.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,4 +1,4 @@
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
xom-1.1.jar
---- a/src/META-INF/test-qm.libdepends 2011-03-27 14:22:01.000000000 +0530
-+++ b/src/META-INF/test-qm.libdepends 2011-03-27 14:22:23.000000000 +0530
+--- a/src/META-INF/test-qm.libdepends 2011-04-19 09:35:34.000000000 +0530
++++ b/src/META-INF/test-qm.libdepends 2011-04-19 09:35:46.000000000 +0530
@@ -1 +1 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-qsaratomic.libdepends 2011-03-27 14:22:02.000000000
+0530
-+++ b/src/META-INF/test-qsaratomic.libdepends 2011-03-27 14:22:23.000000000
+0530
++vecmath*.jar
+--- a/src/META-INF/test-qsaratomic.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/test-qsaratomic.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-qsarbond.libdepends 2011-03-27 14:21:58.000000000
+0530
-+++ b/src/META-INF/test-qsarbond.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-qsarbond.libdepends 2011-04-19 09:35:32.000000000
+0530
++++ b/src/META-INF/test-qsarbond.libdepends 2011-04-19 09:36:01.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-qsarionpot.libdepends 2011-03-27 14:22:04.000000000
+0530
-+++ b/src/META-INF/test-qsarionpot.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-qsarionpot.libdepends 2011-04-19 09:35:37.000000000
+0530
++++ b/src/META-INF/test-qsarionpot.libdepends 2011-04-19 09:36:04.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-qsarmolecular.libdepends 2011-03-27
14:22:01.000000000 +0530
-+++ b/src/META-INF/test-qsarmolecular.libdepends 2011-03-27
14:22:23.000000000 +0530
+--- a/src/META-INF/test-qsarmolecular.libdepends 2011-04-19
09:35:34.000000000 +0530
++++ b/src/META-INF/test-qsarmolecular.libdepends 2011-04-19
09:36:03.000000000 +0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-qsarprotein.libdepends 2011-03-27 14:22:02.000000000
+0530
-+++ b/src/META-INF/test-qsarprotein.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-qsarprotein.libdepends 2011-04-19 09:35:35.000000000
+0530
++++ b/src/META-INF/test-qsarprotein.libdepends 2011-04-19 09:36:03.000000000
+0530
@@ -1,4 +1,4 @@
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
log4j.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-render.libdepends 2011-03-27 14:22:05.000000000
+0530
-+++ b/src/META-INF/test-render.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-render.libdepends 2011-04-19 09:35:37.000000000
+0530
++++ b/src/META-INF/test-render.libdepends 2011-04-19 09:36:05.000000000
+0530
@@ -1,2 +1,2 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
---- a/src/META-INF/test-sdg.libdepends 2011-03-27 14:22:04.000000000 +0530
-+++ b/src/META-INF/test-sdg.libdepends 2011-03-27 14:22:23.000000000 +0530
++vecmath*.jar
+--- a/src/META-INF/test-sdg.libdepends 2011-04-19 09:35:37.000000000 +0530
++++ b/src/META-INF/test-sdg.libdepends 2011-04-19 09:36:04.000000000 +0530
@@ -1,3 +1,3 @@
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-smarts.libdepends 2011-03-27 14:22:00.000000000
+0530
-+++ b/src/META-INF/test-smarts.libdepends 2011-03-27 14:22:23.000000000
+0530
+--- a/src/META-INF/test-smarts.libdepends 2011-04-19 09:35:34.000000000
+0530
++++ b/src/META-INF/test-smarts.libdepends 2011-04-19 09:36:02.000000000
+0530
@@ -1,3 +1,3 @@
jgrapht-0.6.0.jar
log4j.jar
-vecmath1.2-1.14.jar
-+vecmath.jar
++vecmath*.jar
diff --git a/debian/patches/22_fix_build.patch
b/debian/patches/22_fix_build.patch
index a19e2c9..81f8a78 100644
--- a/debian/patches/22_fix_build.patch
+++ b/debian/patches/22_fix_build.patch
@@ -1,10 +1,11 @@
Description: Disable components which fail to build because of yet unpackaged
build dependencies. Also change references to certain build dependencies as
per names in system.
-Forwarded: not-needed
+ Note: Only the changes which are relevant upstream have been forwarded.
+Forwarded:
https://sourceforge.net/tracker/?func=detail&aid=3294458&group_id=20024&atid=320024
Author: Onkar Shinde <onshi...@ubuntu.com>
---- a/build.xml 2011-04-17 15:36:32.000000000 +0530
-+++ b/build.xml 2011-04-17 15:40:05.000000000 +0530
+--- a/build.xml 2011-04-20 20:24:09.000000000 +0530
++++ b/build.xml 2011-04-20 20:24:35.000000000 +0530
@@ -39,7 +39,7 @@
<!-- Include the ant-contrib goodies -->
<taskdef resource="net/sf/antcontrib/antlib.xml">
@@ -50,472 +51,461 @@ Author: Onkar Shinde <onshi...@ubuntu.com>
</javac>
<!-- create a autogenerated.classes file, if applicable, so
that these files can be included in the jar -->
-@@ -405,7 +410,7 @@
- <!-- and then jar things up into the module jar -->
- <jar jarfile="${dist}/jar/cdk-${module}.jar">
- <fileset dir="${build}/${module}">
-- <includesfile name="${build}/${module}.classes" />
-+ <include name="**/*.class" />
- <includesfile
name="${build}/${module}.autogenerated.classes"
if="module.autogenerated.present"/>
- <excludesfile name="${build}/java1.4+.classes"
if="isJava13"/>
- <!-- excludesfile name="${build}/java1.4.classes"
unless="isJava14"/ -->
-@@ -468,8 +473,8 @@
+@@ -468,8 +473,6 @@
<!-- OK, we now need to do some replacements such as
adding cdk.module tags and changing access modes
-->
- <replace
file="${src}/main/org/openscience/cdk/smiles/smarts/parser/JJTSMARTSParserState.java"
- token="class JJTSMARTSParserState {" value="public class
JJTSMARTSParserState {" />
-+ <!--replace
file="${src}/main/org/openscience/cdk/smiles/smarts/parser/JJTSMARTSParserState.java"
-+ token="class JJTSMARTSParserState {" value="public class
JJTSMARTSParserState {" /-->
<replace dir="${src}/main/org/openscience/cdk/smiles/smarts/parser"
excludes="AST*.java,SMARTSParser.jjt,SMARTSParser.jj,*Node.java"
token="package org.openscience.cdk.smiles.smarts.parser;"
summary="true" >
---- a/src/META-INF/atomtype.libdepends 2011-04-17 15:13:30.000000000 +0530
-+++ b/src/META-INF/atomtype.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/atomtype.libdepends 2011-04-20 20:23:11.000000000 +0530
++++ b/src/META-INF/atomtype.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1 +1 @@
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/core.libdepends 2011-04-17 15:13:27.000000000 +0530
-+++ b/src/META-INF/core.libdepends 2011-04-17 15:36:33.000000000 +0530
++log4j*.jar
+--- a/src/META-INF/core.libdepends 2011-04-20 20:23:09.000000000 +0530
++++ b/src/META-INF/core.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1 +1 @@
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/isomorphism.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/isomorphism.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+--- a/src/META-INF/isomorphism.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/isomorphism.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/reaction.libdepends 2011-04-17 15:36:32.000000000 +0530
-+++ b/src/META-INF/reaction.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/reaction.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/reaction.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,5 +1,5 @@
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
---- a/src/META-INF/standard.libdepends 2011-04-17 15:36:32.000000000 +0530
-+++ b/src/META-INF/standard.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/standard.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/standard.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,3 +1,3 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-atomtype.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-atomtype.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-atomtype.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-atomtype.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-builder3d.libdepends 2011-04-17 15:36:32.000000000
+0530
-+++ b/src/META-INF/test-builder3d.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-builder3d.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-builder3d.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,4 +1,4 @@
jama-1.0.2.jar
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-charges.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-charges.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-charges.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-charges.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-core.libdepends 2011-04-17 15:36:32.000000000
+0530
-+++ b/src/META-INF/test-core.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-core.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-core.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-data.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-data.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-data.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-data.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-datadebug.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-datadebug.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-datadebug.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-datadebug.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-diff.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-diff.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-diff.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-diff.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/test-extra.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-extra.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+--- a/src/META-INF/test-extra.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-extra.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
cmlxom-2.5-b1.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-fingerprint.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-fingerprint.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-fingerprint.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-fingerprint.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
- vecmath.jar
+ vecmath*.jar
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/test-forcefield.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-forcefield.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+--- a/src/META-INF/test-forcefield.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-forcefield.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,4 +1,4 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-formula.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-formula.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-formula.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-formula.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-inchi.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-inchi.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-inchi.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-inchi.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
jniinchi-0.5.jar
cmlxom-2.5-b1.jar
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/test-interfaces.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-interfaces.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+--- a/src/META-INF/test-interfaces.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-interfaces.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/test-io.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/test-io.libdepends 2011-04-17 15:36:33.000000000 +0530
++log4j*.jar
+--- a/src/META-INF/test-io.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/test-io.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,6 +1,6 @@
jgrapht-0.6.0.jar
cmlxom-2.5-b1.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
xpp3-1.1.4c.jar
---- a/src/META-INF/test-ioformats.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-ioformats.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-ioformats.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-ioformats.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,6 +1,6 @@
jgrapht-0.6.0.jar
cmlxom-2.5-b1.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
xpp3-1.1.4c.jar
---- a/src/META-INF/test-ionpot.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-ionpot.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-ionpot.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-ionpot.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-isomorphism.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-isomorphism.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-isomorphism.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-isomorphism.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-libiocml.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-libiocml.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-libiocml.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-libiocml.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
cmlxom-2.5-b1.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-libiomd.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-libiomd.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-libiomd.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-libiomd.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,4 +1,4 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
cmlxom-2.5-b1.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-nonotify.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-nonotify.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-nonotify.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-nonotify.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-pcore.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-pcore.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-pcore.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-pcore.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,4 +1,4 @@
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-pdb.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/test-pdb.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/test-pdb.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/test-pdb.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,4 +1,4 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-qsar.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-qsar.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-qsar.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-qsar.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-qsaratomic.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-qsaratomic.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-qsaratomic.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-qsaratomic.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-qsarbond.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-qsarbond.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-qsarbond.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-qsarbond.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-qsarionpot.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-qsarionpot.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-qsarionpot.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-qsarionpot.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-qsarmolecular.libdepends 2011-04-17
15:36:33.000000000 +0530
-+++ b/src/META-INF/test-qsarmolecular.libdepends 2011-04-17
15:36:33.000000000 +0530
+--- a/src/META-INF/test-qsarmolecular.libdepends 2011-04-20
20:24:09.000000000 +0530
++++ b/src/META-INF/test-qsarmolecular.libdepends 2011-04-20
20:24:09.000000000 +0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-qsarprotein.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-qsarprotein.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-qsarprotein.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-qsarprotein.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,7 +1,7 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jama-1.0.2.jar
jgrapht-0.6.0.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
JRI.jar
sjava-0.68.jar
---- a/src/META-INF/test-reaction.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-reaction.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-reaction.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-reaction.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
jama-1.0.2.jar
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-render.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-render.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-render.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-render.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,2 +1,2 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-sdg.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/test-sdg.libdepends 2011-04-17 15:36:33.000000000 +0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-sdg.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/test-sdg.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,3 +1,3 @@
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
jgrapht-0.6.0.jar
---- a/src/META-INF/test-smarts.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-smarts.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-smarts.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-smarts.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test-smiles.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-smiles.libdepends 2011-04-17 15:36:33.000000000
+0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test-smiles.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-smiles.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
++log4j*.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/test-standard.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-standard.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/test-standard.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-standard.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,5 +1,5 @@
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
- vecmath.jar
+ vecmath*.jar
cmlxom-2.5-b1.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/test-structgen.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/test-structgen.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/test-structgen.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/test-structgen.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -1,3 +1,3 @@
-log4j.jar
-+log4j-1.2.jar
++log4j*.jar
jgrapht-0.6.0.jar
- vecmath.jar
---- a/src/META-INF/test-valencycheck.libdepends 2011-04-17
15:36:33.000000000 +0530
-+++ b/src/META-INF/test-valencycheck.libdepends 2011-04-17
15:36:33.000000000 +0530
+ vecmath*.jar
+--- a/src/META-INF/test-valencycheck.libdepends 2011-04-20
20:24:09.000000000 +0530
++++ b/src/META-INF/test-valencycheck.libdepends 2011-04-20
20:24:09.000000000 +0530
@@ -1,3 +1,3 @@
jgrapht-0.6.0.jar
-log4j.jar
-+log4j-1.2.jar
- vecmath.jar
---- a/src/META-INF/test.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/test.libdepends 2011-04-17 15:36:33.000000000 +0530
++log4j*.jar
+ vecmath*.jar
+--- a/src/META-INF/test.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/test.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,2 +1,2 @@
- vecmath.jar
+ vecmath*.jar
-log4j.jar
-+log4j-1.2.jar
---- a/src/META-INF/dict.libdepends 2011-04-17 15:13:29.000000000 +0530
-+++ b/src/META-INF/dict.libdepends 2011-04-17 15:36:33.000000000 +0530
++log4j*.jar
+--- a/src/META-INF/dict.libdepends 2011-04-20 20:23:11.000000000 +0530
++++ b/src/META-INF/dict.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1 +1 @@
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/extra.libdepends 2011-04-17 15:36:32.000000000 +0530
-+++ b/src/META-INF/extra.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/extra.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/extra.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,3 +1,3 @@
jama-1.0.2.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/inchi.libdepends 2011-04-17 15:36:32.000000000 +0530
-+++ b/src/META-INF/inchi.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/inchi.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/inchi.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,4 +1,4 @@
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
jniinchi-0.5.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/libiocml.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/libiocml.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/libiocml.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/libiocml.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,4 +1,4 @@
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/libiomd.libdepends 2011-04-17 15:13:27.000000000 +0530
-+++ b/src/META-INF/libiomd.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/libiomd.libdepends 2011-04-20 20:23:09.000000000 +0530
++++ b/src/META-INF/libiomd.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,2 +1,2 @@
cmlxom-2.5-b1.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/pcore.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/pcore.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/pcore.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/pcore.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,2 +1,2 @@
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/pdbcml.libdepends 2011-04-17 15:13:29.000000000 +0530
-+++ b/src/META-INF/pdbcml.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/pdbcml.libdepends 2011-04-20 20:23:10.000000000 +0530
++++ b/src/META-INF/pdbcml.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,2 +1,2 @@
-xom-1.1.jar
-+xom.jar
++xom*.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/qsar.libdepends 2011-04-17 15:36:32.000000000 +0530
-+++ b/src/META-INF/qsar.libdepends 2011-04-17 15:36:33.000000000 +0530
+--- a/src/META-INF/qsar.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/qsar.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -3,4 +3,4 @@
jgrapht-0.6.0.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/qsaratomic.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/qsaratomic.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/qsaratomic.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/qsaratomic.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -3,4 +3,4 @@
jgrapht-0.6.0.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/qsarbond.libdepends 2011-04-17 15:36:33.000000000 +0530
-+++ b/src/META-INF/qsarbond.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/qsarbond.libdepends 2011-04-20 20:24:09.000000000 +0530
++++ b/src/META-INF/qsarbond.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -3,4 +3,4 @@
jgrapht-0.6.0.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/qsarcml.libdepends 2011-04-17 15:13:30.000000000 +0530
-+++ b/src/META-INF/qsarcml.libdepends 2011-04-17 15:36:33.000000000 +0530
++xom*.jar
+--- a/src/META-INF/qsarcml.libdepends 2011-04-20 20:23:12.000000000 +0530
++++ b/src/META-INF/qsarcml.libdepends 2011-04-20 20:24:09.000000000 +0530
@@ -1,2 +1,2 @@
-xom-1.1.jar
-+xom.jar
++xom*.jar
cmlxom-2.5-b1.jar
---- a/src/META-INF/qsarmolecular.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/qsarmolecular.libdepends 2011-04-17 15:36:33.000000000
+0530
+--- a/src/META-INF/qsarmolecular.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/qsarmolecular.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -3,4 +3,4 @@
jgrapht-0.6.0.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
---- a/src/META-INF/qsarprotein.libdepends 2011-04-17 15:36:33.000000000
+0530
-+++ b/src/META-INF/qsarprotein.libdepends 2011-04-17 15:36:33.000000000
+0530
++xom*.jar
+--- a/src/META-INF/qsarprotein.libdepends 2011-04-20 20:24:09.000000000
+0530
++++ b/src/META-INF/qsarprotein.libdepends 2011-04-20 20:24:09.000000000
+0530
@@ -3,4 +3,4 @@
jgrapht-0.6.0.jar
sjava-0.68.jar
- vecmath.jar
+ vecmath*.jar
-xom-1.1.jar
-+xom.jar
++xom*.jar
diff --git a/debian/watch b/debian/watch
index f882c61..d2b61ad 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,2 +1,2 @@
version=3
-http://sf.net/cdk/ cdk-(1\.2[\d\.]+)\.tar\.gz debian uupdate
+http://sf.net/cdk/ cdk-(1\.[2468]\.[\d\.]+)\.tar\.gz debian uupdate
--
Alioth's /usr/local/bin/git-commit-notice on
/srv/git.debian.org/git/pkg-java/cdk.git
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