On Jan 3, 2010, at 6:09 PM, Jim Bouldin wrote:


Is there a command for partial matching of character strings? Specifically, I'd like to be able to calculate the mean of the values in any columns in a data frame or matrix that have identity in part of their column names. For
example, columns labeled "mpw06a" and "mpw06b" match on the first five
characters; their mean would be taken whereas any columns beginning with
other than "mpw06" would be excluded.

?grep
?"["

> tdf <- data.frame(mpw06a=rnorm(10), mpw06b=rnorm(10), abc=rnorm(10))

> lapply(tdf[ , grep("mpw06", names(tdf)) ], mean)
$mpw06a
[1] -0.1825447

$mpw06b
[1] -0.2386772

I need to compare every pair of
columns in the frame, and in some cases, possibly three at a time.

?combn


Thanks in advance for any ideas.








Jim Bouldin
Research Ecologist
Department of Plant Sciences, UC Davis
Davis CA, 95616
530-554-1740

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David Winsemius, MD
Heritage Laboratories
West Hartford, CT

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