Thank you for your answer, I got the second part!
Ivan
Le 1/19/2010 17:03, Carlos Ortega a écrit :
> Hello,
>
> You can loop in the subset you need by storing in a variable and
> looping on that variable with indexes:
>
> seq.dat<-c(seq(7,10,1), seq(12,17,1))
> for( i in 1:length(seq.dat) ) {
>
> j<-seq.dat[i]
> with(ssfa, twoplots(TO_POS, ssfa[[j]]))
>
> }
>
> Regards,
> Carlos.
>
> On Tue, Jan 19, 2010 at 4:53 PM, Ivan Calandra
> <ivan.calan...@uni-hamburg.de <mailto:ivan.calan...@uni-hamburg.de>>
> wrote:
>
> Hi again!
>
> I feel like I cannot do anything by myself but I would now like to
> plot
> for all numeric variables I have (14 of them). I wanted to add a
> loop then.
> The code is:
>
> ------
> #defines the function for the plots (as written by Duncan Murdoch)
> twoplots <- function(x, y) {
> ylab <- deparse(substitute(y)) # get the expression passed as y
> xlab <- deparse(substitute(x)) # get the expression passed as x
> hist(y, main=paste("Histogram of ", ylab), xlab=ylab)
> boxplot(y ~ x, main=paste("Boxplot of", ylab, "by", xlab),
> xlab=xlab,
> ylab=ylab)
> }
>
> #run the function on ssfa with TO_POS as x and ssfa[[i]] as y, the
> numerical variables are from column 7 to 21
> for (i in 7:21) {
> with(ssfa, twoplots(TO_POS, ssfa[[i]]))
> }
> ------
>
> I have therefore two questions:
> - The code above works fine, but in the titles I get "Histogram of
> ssfa[[i]]" instead of "Histogram of 'variable name'"
> - What if I don't want to loop on all variables, but for example,
> variables (=columns) 7 to 10 and 12 to 17? How do I give such
> breaks and
> ranges?
> I admit I'm thinking about it since yesterday and I don't have a
> clue...
>
> I hope you will be able to help me.
> Thanks in advance,
> Ivan.
>
>
>
> Duncan Murdoch a écrit :
> > On 18/01/2010 9:02 AM, Ivan Calandra wrote:
> >> Hi everybody!
> >>
> >> I'm trying to write a script to plot a histogram, a boxplot and a
> >> qq-plot (under Windows XP, R2.10 if it matters)
> >>
> >> What I want to do: define the variables (x and y) to be used at the
> >> very beginning, so that I don't have to change all occurrences
> in the
> >> script when I want to plot a different variable.
> >>
> >> The dataset is called "ssfa". TO_POS is a categorical variable
> >> containing the tooth position for each sample. Asfc is a numerical
> >> variable. In my dataset, I have more variables but it wouldn't
> >> change; I want to plot one numeric vs one category. Do I need to
> >> supply some data? I don't think it's really necessary but let
> me know
> >> if you would like to.
> >>
> >> The code of what I do up to now:
> >> ---
> >> x <- ssfa$TO_POS
> >> y <- ssfa$Asfc
> >> hist(y, main="Histogram of Asfc", xlab="Asfc")
> >> boxplot(y~x, main="Boxplot of Asfc by TO_POS", xlab="TO_POS",
> >> ylab="Asfc")
> >> ---
> >>
> >> I would like something like: hist(y, main="Histogram of y",
> xlab="y")
> >> but that will add "Asfc" where I write "y".
> >> And the same for boxplot(y~x, main="Boxplot of y by x", xlab="x",
> >> ylab="y")
> >> I thought about something like:
> >> ---
> >> cat <- "TO_POS"
> >> num <- "Asfc"
> >> x <- paste("ssfa$", "TO_POS", sep="")
> >> y <- paste("ssfa$", "Asfc", sep="")
> >> hist(y, main=paste("Histogram of ", cat, sep=""), xlab=num)
> >> ---
> >> but it doesn't work since y is a string. I don't know how to
> get the
> >> syntax correctly. I am on the right path at least?!
> >
> > I think you're on the wrong path. You want to write a function, and
> > pass either x and y as arguments, or pass a formula containing both
> > (the former is easier). For example,
> >
> > twoplots <- function(x, y) {
> > ylab <- deparse(substitute(y)) # get the expression passed as y
> > xlab <- deparse(substitute(x)) # get the expression passed as x
> > hist(y, main=paste("Histogram of ", ylab), xlab=ylab)
> > boxplot(y ~ x, main=paste("Boxplot of", ylab, "by", xlab),
> > xlab=xlab, ylab=ylab)
> > }
> >
> > Then
> >
> > with(ssfa, twoplots(TO_POS, Asfc))
> >
> > will give you your plots.
> >
> > Duncan Murdoch
> >
>
> [[alternative HTML version deleted]]
>
>
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>
>
--
Ivan CALANDRA
PhD Student
University of Hamburg
Biozentrum Grindel und Zoologisches Institut und Museum
Martin-Luther-King-Platz 3
D-20146 Hamburg, GERMANY
+49(0)40 42838 6231
ivan.calan...@uni-hamburg.de
**********
http://www.for771.uni-bonn.de
http://webapp5.rrz.uni-hamburg.de/mammals/eng/mitarbeiter.php
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