Hi Santiago,
Look at the ace function in the Ape package - to get a max parsimony
reconstruction set branch lengths =1 and run a maximum likelihood
estimation. You can find further information here: http://www.r-phylo.org/wiki/HowTo/Ancestral_State_Reconstruction
Sam
On Jan 23, 2010, at 8:32 PM, Santiago Claramunt wrote:
Hi all,
Does anybody know a function in R for performing maximum parsimony
ancestral reconstructions?
Best,
Santiago
Santiago Claramunt
Museum of Natural Science,
119 Foster Hall,
Louisiana State University,
Baton Rouge, LA70803
scla...@tigers.lsu.edu
http://www.museum.lsu.edu/Claramunt/Home.html
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