This is fixed in ape 5.0-3 just uploaded one ape's site:
http://ape-package.ird.fr/ape_installation.html#versions
If you don't want to (or cannot) re-install ape, you can get the file
plot.phylo.R from the source package and source() it into R -- not just
the function phylogramm.plot: because of the namespace it is better to
source plot.phylo() at the same time.
Best,
Emmanuel
Le 23/12/2017 à 22:48, Emmanuel Paradis a écrit :
Hi Walter,
That shouldn't be too hard to fix. This happens, apparenly, only if
type="phylogram" -- which is the default. This seems to work correctly
if type="c" (and if there are branch lengths).
I'll update you when it's fixed.
Best,
Emmanuel
Le 20/12/2017 à 22:17, Walter, Mathias a écrit :
Hi!
I tried using the edge.color parameter with a vector of colors of
plot.phylo on a tree having several internal single nodes (which have
just
one child node). Unfortunately, it reports an error that A/B needs a
value.
I tracked it down to the function phylogramm.plot which expects nodes
having at least two children.
Is there an easy solution for this, except using collapse.single?
--
Kind regards,
Mathias
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