Dear Bioconductor Core Team,
I am the maintainer of cliqueMS. The package was flagged to deprecation
but I have been able to fix the error that was causing the failure in
the checks. I just had to remove a dependency that is no longer on CRAN
and replace for a package available there. After checks and passing all
the test I could find another dependency that does a similar
calculation. I already pushed to Bioc devel (3.18 I cannot make any more
commits). So please remove cliqueMS from the list of deprecated packages
for 3.19. Tomorrow we will see a new build and I expect all OS and hosts
to pass.
Kind Regards,
Oriol Senan
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