Re: [Rd] Crash report: regexpr(a{2-}, )
[Accidentally posted this to r-help instead of r-devel; reposting to put
it into the correct list and thread. My apologies for the duplication.]
On 9/21/2010 8:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
To add another (windows) example it also crashes the 2.12.0 alpha build:
sessionInfo()
R version 2.12.0 alpha (2010-09-20 r52948)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file tre-compile.c,
line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
/Henrik
--
Brian S. Diggs, PhD
Senior Research Associate, Department of Surgery
Oregon Health Science University
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] Crash report: regexpr(a{2-}, )
It crashes R on my linux:
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
My setup is:
sessionInfo()
R version 2.11.1 (2010-05-31)
i386-redhat-linux-gnu
locale:
[1] LC_CTYPE=en_NZ LC_NUMERIC=C LC_TIME=en_NZ
[4] LC_COLLATE=en_NZ LC_MONETARY=CLC_MESSAGES=en_NZ
[7] LC_PAPER=en_NZ LC_NAME=CLC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=en_NZ LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] djsmisc_1.0-1
David Scott
On 23/09/10 04:37, Brian Diggs wrote:
[Accidentally posted this to r-help instead of r-devel; reposting to put
it into the correct list and thread. My apologies for the duplication.]
On 9/21/2010 8:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
To add another (windows) example it also crashes the 2.12.0 alpha build:
sessionInfo()
R version 2.12.0 alpha (2010-09-20 r52948)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file tre-compile.c,
line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
/Henrik
--
_
David Scott Department of Statistics
The University of Auckland, PB 92019
Auckland 1142,NEW ZEALAND
Phone: +64 9 923 5055, or +64 9 373 7599 ext 85055
Email: d.sc...@auckland.ac.nz, Fax: +64 9 373 7018
Director of Consulting, Department of Statistics
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] Crash report: regexpr(a{2-}, )
On Sep 21, 2010, at 11:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an
unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an
unusual way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
Not a problem in reasonably current Mac with 64bit GUI:
regexpr(a{2-}, )
[1] 1
attr(,match.length)
[1] 0
sub(a{2-}, )
Error in is.character(x) : 'x' is missing
gsub(a{2-}, )
Error in is.character(x) : 'x' is missing
R version 2.11.1 Patched (2010-08-26 r52822)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
[R.app GUI 1.35 (5612) x86_64-apple-darwin9.8.0]
--
David.
/Henrik
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] Crash report: regexpr(a{2-}, )
David's post made me realize that I got the sub()/gsub() lines wrong.
It should be:
regexpr(a{2-}, )
sub(a{2-}, , )
gsub(a{2-}, , )
Either way, the crash is there, at on least Windows and Linux.
/Henrik
On Tue, Sep 21, 2010 at 8:43 PM, David Winsemius dwinsem...@comcast.net wrote:
On Sep 21, 2010, at 11:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
Not a problem in reasonably current Mac with 64bit GUI:
regexpr(a{2-}, )
[1] 1
attr(,match.length)
[1] 0
sub(a{2-}, )
Error in is.character(x) : 'x' is missing
gsub(a{2-}, )
Error in is.character(x) : 'x' is missing
R version 2.11.1 Patched (2010-08-26 r52822)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
[R.app GUI 1.35 (5612) x86_64-apple-darwin9.8.0]
--
David.
/Henrik
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] Crash report: regexpr(a{2-}, )
On Sep 22, 2010, at 12:12 AM, Henrik Bengtsson wrote:
David's post made me realize that I got the sub()/gsub() lines wrong.
It should be:
regexpr(a{2-}, )
sub(a{2-}, , )
gsub(a{2-}, , )
Still no crash on a Mac. Did you mean to include a third argument to
regexpr() as you did for sub and gsub?
--
David.
Either way, the crash is there, at on least Windows and Linux.
/Henrik
On Tue, Sep 21, 2010 at 8:43 PM, David Winsemius dwinsem...@comcast.net
wrote:
On Sep 21, 2010, at 11:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an
unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an
unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1
||
iter-max == 1' failed.
Aborted
Not a problem in reasonably current Mac with 64bit GUI:
regexpr(a{2-}, )
[1] 1
attr(,match.length)
[1] 0
sub(a{2-}, )
Error in is.character(x) : 'x' is missing
gsub(a{2-}, )
Error in is.character(x) : 'x' is missing
R version 2.11.1 Patched (2010-08-26 r52822)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
[R.app GUI 1.35 (5612) x86_64-apple-darwin9.8.0]
--
David.
/Henrik
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
Re: [Rd] Crash report: regexpr(a{2-}, )
On Tue, Sep 21, 2010 at 9:20 PM, David Winsemius dwinsem...@comcast.net wrote:
On Sep 22, 2010, at 12:12 AM, Henrik Bengtsson wrote:
David's post made me realize that I got the sub()/gsub() lines wrong.
It should be:
regexpr(a{2-}, )
sub(a{2-}, , )
gsub(a{2-}, , )
Still no crash on a Mac. Did you mean to include a third argument to
regexpr() as you did for sub and gsub?
No, it was only that sub()/gsub() needs at least three arguments while
regexpr() only needs two, and did a simple cut'n'paste when I wrote
the original message. All three commands probably use the same
underlying regular expression library, so it is likely it is same bug.
It looks like at least on your OS/R version it does not crash.
/Henrik
--
David.
Either way, the crash is there, at on least Windows and Linux.
/Henrik
On Tue, Sep 21, 2010 at 8:43 PM, David Winsemius dwinsem...@comcast.net
wrote:
On Sep 21, 2010, at 11:04 PM, Henrik Bengtsson wrote:
Each of the following calls crash (core dumps) R (R --vanilla) on
various versions and OSes:
regexpr(a{2-}, )
sub(a{2-}, )
gsub(a{2-}, )
EXAMPLES:
sessionInfo()
R version 2.11.1 Patched (2010-09-16 r52949)
Platform: i386-pc-mingw32 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.12.0 Under development (unstable) (2010-09-14 r52910)
Platform: i386-pc-mingw32/i386 (32-bit)
...
regexpr(a{2-}, )
Assertion failed: iter-max == -1 || iter-max == 1, file
tre-compile.c, line 1825
This application has requested the Runtime to terminate it in an unusual
way.
Please contact the application's support team for more information.
sessionInfo()
R version 2.11.0 Patched (2010-05-09 r51960)
x86_64-unknown-linux-gnu
...
regexpr(a{2-}, )
R: tre-compile.c:1825: tre_ast_to_tnfa: Assertion `iter-max == -1 ||
iter-max == 1' failed.
Aborted
Not a problem in reasonably current Mac with 64bit GUI:
regexpr(a{2-}, )
[1] 1
attr(,match.length)
[1] 0
sub(a{2-}, )
Error in is.character(x) : 'x' is missing
gsub(a{2-}, )
Error in is.character(x) : 'x' is missing
R version 2.11.1 Patched (2010-08-26 r52822)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
[R.app GUI 1.35 (5612) x86_64-apple-darwin9.8.0]
--
David.
/Henrik
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
