Re: [R] Help with package EasyPubmed
> On Aug 3, 2021, at 11:20 AM, bharat rawlley via R-help > wrote: > > Hello, > When I try to run the following code using the package Easypubmed, I get a > null result - >> batch_pubmed_download(query_7) > NULL > #query_7 <- "Cardiology AND randomizedcontrolledtrial[Filter] AND 2011[PDAT]" > However, the exact same search string yields 668 results on Pubmed. Did you try with: 'Cardiology AND "randomized controlled trial"[Filter] AND 2011[PDAT]' DAVID. > > > I am unable to figure out why this is happening. If I use the search string > "Cardiology AND 2011[PDAT]" then it works just fine. > Any help would be greatly appreciated > Thank you! > > [[alternative HTML version deleted]] > > __ > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to ignore outliers in a boxplot
Thanks a lot Sir Yes, that's what I was looking for. Warm regards On Wed, Aug 4, 2021 at 4:01 PM Rui Barradas wrote: > Hello, > > I'm not sure whether you are looking for argument range: > > > boxplot(var, range = 0) > > > 14 is now part of the whiskers, see ?boxplot. > > Hope this helps, > > Rui Barradas > > Às 14:51 de 04/08/21, Neha gupta escreveu: > > Hi > > > > I have values like: > > > > var= c(0, 0, 0,0, 0, 14, 0, 14, 0, 2, 3) > > > > I want to show these values in a boxplot > > > > boxplot (var) > > > > However, the boxplot shows only the zero values and the value till 14 are > > shown as outliers.. I want to show all my values as boxplot, can I do > that? > > > > If I use outline=F, it excludes all the outliers. > > > > [[alternative HTML version deleted]] > > > > __ > > R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > > [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] How to ignore outliers in a boxplot
Hello, I'm not sure whether you are looking for argument range: boxplot(var, range = 0) 14 is now part of the whiskers, see ?boxplot. Hope this helps, Rui Barradas Às 14:51 de 04/08/21, Neha gupta escreveu: Hi I have values like: var= c(0, 0, 0,0, 0, 14, 0, 14, 0, 2, 3) I want to show these values in a boxplot boxplot (var) However, the boxplot shows only the zero values and the value till 14 are shown as outliers.. I want to show all my values as boxplot, can I do that? If I use outline=F, it excludes all the outliers. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] How to ignore outliers in a boxplot
Hi I have values like: var= c(0, 0, 0,0, 0, 14, 0, 14, 0, 2, 3) I want to show these values in a boxplot boxplot (var) However, the boxplot shows only the zero values and the value till 14 are shown as outliers.. I want to show all my values as boxplot, can I do that? If I use outline=F, it excludes all the outliers. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] What are the pros and cons of the log.p parameter in (p|q)norm and similar?
Response to 1You need the log version e.g. in maximum likelihood, otherwise the product of the densities and probabilities can become very small. Ursprüngliche Nachricht Von: r-help-requ...@r-project.org Datum: 04.08.21 12:01 (GMT+01:00) An: r-help@r-project.org Betreff: R-help Digest, Vol 222, Issue 4 Send R-help mailing list submissions to r-help@r-project.orgTo subscribe or unsubscribe via the World Wide Web, visit https://stat.ethz.ch/mailman/listinfo/r-helpor, via email, send a message with subject or body 'help' tor-help-request@r-project.orgYou can reach the person managing the list at r-help-owner@r-project.orgWhen replying, please edit your Subject line so it is more specificthan "Re: Contents of R-help digest..."Today's Topics: 1. What are the pros and cons of the log.p parameter in (p|q)norm and similar? (Michael Dewey) 2. Help with package EasyPubmed (bharat rawlley) 3. Re: Help with package EasyPubmed (bharat rawlley) 4. Re: What are the pros and cons of the log.p parameter in (p|q)norm and similar? (Duncan Murdoch) 5. Re: What are the pros and cons of the log.p parameter in (p|q)norm and similar? (Bill Dunlap) 6. Creating a log-transformed histogram of multiclass data (Tom Woolman) 7. Re: Creating a log-transformed histogram of multiclass data (Tom Woolman)--Message: 1Date: Tue, 3 Aug 2021 17:20:12 +0100From: Michael Dewey To: "r-help@r-project.org" Subject: [R] What are the pros and cons of the log.p parameter in (p|q)norm and similar?Message-ID: Content-Type: text/plain; charset="utf-8"; Format="flowed"Short versionApart from the ability to work with values of p too small to be of much practical use what are the advantages and disadvantages of setting this to TRUE?Longer versionI am contemplating upgrading various functions in one of my packages to use this and as far as I can see it would only have the advantage of allowing people to use very small p-values but before I go ahead have I missed anything? I am most concerned with negatives but if there is any other advantage I would mention that in the vignette. I am not concerned about speed or the extra effort in coding and expanding the documentation.-- Michaelhttp://www.dewey.myzen.co.uk/home.html--Message: 2Date: Tue, 3 Aug 2021 18:20:52 + (UTC)From: bharat rawlley To: R-help Mailing List Subject: [R] Help with package EasyPubmedMessage-ID: <1046636584.2205366.1628014852...@mail.yahoo.com>Content-Type: text/plain; charset="utf-8"Hello, When I try to run the following code using the package Easypubmed, I get a null result - > batch_pubmed_download(query_7)NULL#query_7 <- "Cardiology AND randomizedcontrolledtrial[Filter] AND 2011[PDAT]"However, the exact same search string yields 668 results on Pubmed. I am unable to figure out why this is happening. If I use the search string "Cardiology AND 2011[PDAT]" then it works just fine. Any help would be greatly appreciatedThank you! [[alternative HTML version deleted]]--Message: 3Date: Tue, 3 Aug 2021 18:26:40 + (UTC)From: bharat rawlley To: R-help Mailing List Subject: Re: [R] Help with package EasyPubmedMessage-ID: <712126143.2207911.1628015200...@mail.yahoo.com>Content-Type: text/plain; charset="utf-8" Okay, the following search string resolved my issue - "Cardiology AND randomized controlled trial[Publication type] AND 2011[PDAT]"Thank you! On Tuesday, 3 August, 2021, 02:21:38 pm GMT-4, bharat rawlley via R-help wrote: Hello, When I try to run the following code using the package Easypubmed, I get a null result - > batch_pubmed_download(query_7)NULL#query_7 <- "Cardiology AND randomizedcontrolledtrial[Filter] AND 2011[PDAT]"However, the exact same search string yields 668 results on Pubmed. I am unable to figure out why this is happening. If I use the search string "Cardiology AND 2011[PDAT]" then it works just fine. Any help would be greatly appreciatedThank you! [[alternative HTML version deleted]]__r-h...@r-project.org mailing list -- To UNSUBSCRIBE and more, seehttps://stat.ethz.ch/mailman/listinfo/r-helpPLEASE do read the posting guide http://www.R-project.org/posting-guide.htmland provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]]--Message: 4Date: Tue, 3 Aug 2021 14:53:28 -0400From: Duncan Murdoch To: Michael Dewey , "r-help@r-project.org" Subject: Re: [R] What are the pros and cons of the log.p parameter in(p|q)norm and similar?Message-ID: Content-Type: text/plain; charset="utf-8"; Format="flowed"On 03/08/2021 12:20 p.m., Michael Dewey wrote:> Short version> > Apart from the ability to work with values of p too small to be of much> practical use what
