Re: [R-SIG-Mac] libcurl
BTW - I should add that my memory is that there is at least one package for
having R interact with Python that does an Anaconda install without you really
knowing it. Personally I consider that bad practice. It may be more
convenient but can lead to unexpected trouble down the line just because of
issues like this. I have also seen R and Julia packages install things under
the covers using Homebrew. I also consider this bad practice, again because it
can lead to conflicts that leave the user bewildered . (Homebrew installs is
its own directory, but you must be careful about setting Paths, and path
priority). This was particularly true when building from source.
I have submitted to CRAN and while it can be an utter pain in the butt, I also
appreciate what CRAN does for users of the package - they can install with
reasonable assurance that the needed pieces will work together and there won't
be any hidden gotchas, and that is worth a lot to users, at least in my
experience. I recently spent a week in hell with conda-forge where different
packages used the same library (by name) but the recipes installed different
versions, and they kept on crashing each other.
So the tl;dr version is you likely installed a package for interop between R
and Python, say from source or Github, and undercover it installed Anaconda.
And as people have mentioned, Anaconda has its own R environment, which may
or may not interfere with the standard R install. I check my .profile or
.bash_profile after installs just in case. If there is a setting I will need
to use some software, I move that to a separate file to be sourced when
needed. Since I have started doing that, a lot of conflicts have disappeared.
HTH,
-Roy
> On Feb 27, 2019, at 6:09 PM, Roy Mendelssohn - NOAA Federal
> wrote:
>
> You are welcome (my one good deed for the day - I guess I can go to bed
> now!!!) Anaconda is a great product, I use it for my Python work, they
> actually ask you if you want them to modify the .profile, but people say yes
> without realizing the implications. First time I installed it, I said yes
> but then looked at what was added to the file, and realized that could cause
> conflicts. But since it is so easy to copy that part to another file and
> then source it as needed, you can keep things separate. One of the main
> things is anything in /usr/bin and /usr/local/bin that had similar things in
> Anaconda were finding the Anaconda version.
>
> -Roy
>
>> On Feb 27, 2019, at 5:57 PM, robin hankin wrote:
>>
>> Roy, thanks for this! Your insight explains a great deal of my
>> problems. And indeed I see a whole bunch of PATH additions which were
>> created by anaconda (these are in .bash_profile, certainly not put
>> there by me!).
>>
>> Just to clarify, I'm not using anaconda by choice, it seems to have
>> been installed inadvertently.
>>
>> stop press: configure works! Thanks!
>>
>>
>> Best wishes
>>
>> Robin
>>
>>
>>
>> hankin.ro...@gmail.com
>>
>>
>>
>> hankin.ro...@gmail.com
>>
>>
>>
>>
>> On Thu, Feb 28, 2019 at 2:47 PM Roy Mendelssohn - NOAA Federal via
>> R-SIG-Mac wrote:
>>>
>>> Anaconda adds code to the end of your ,.profile that can really play havoc
>>> with paths in other programs/settings - and off I remember correctly it
>>> puts the changes at the front of your $PATH.. I moved that code in
>>> .profile to a separate file. When I want anaconda, I just source the
>>> file. Makes problems such as that described much less likely. If you are
>>> using iTerm2 or the like, then you can easily have a tab with the Anaconda
>>> paths and the rest of the tabs the more "usual" paths.
>>>
>>> HTH,
>>>
>>> -Roy
>>>
>>>
On Feb 27, 2019, at 5:32 PM, Simon Urbanek
wrote:
That's anaconda - they don't include paths which is why it breaks
everything until you insert a manual override via DYLD_LIBRARY_PATH. See
Robin's e-mail he is NOT using the system curl, but rather a custom
version from anaconda ("/Users/rhankin/anaconda3/lib").
Cheers,
Simon
> On Feb 25, 2019, at 04:28, peter dalgaard wrote:
>
> Hmm, how did "@rpath" get in there? I don't see it anywhere in my build
> and source dirs. Looks like something that should have been substituted
> (by perl?) with the appropriate path.
>
> Is your library (...anaconda3/lib) correctly installed? I have, for the
> system libcurl:
>
> pd$ ls -l /usr/lib/*curl*
> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib
> -> libcurl.4.dylib
> -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib
> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib ->
> libcurl.4.dylib
>
> -pd
>
>
>> On 25 Feb 2019, at 01:28 , robin hankin wrote:
>>
>> thanks for this Peter, my config.log file
Re: [R-SIG-Mac] libcurl
You are welcome (my one good deed for the day - I guess I can go to bed
now!!!) Anaconda is a great product, I use it for my Python work, they
actually ask you if you want them to modify the .profile, but people say yes
without realizing the implications. First time I installed it, I said yes but
then looked at what was added to the file, and realized that could cause
conflicts. But since it is so easy to copy that part to another file and then
source it as needed, you can keep things separate. One of the main things is
anything in /usr/bin and /usr/local/bin that had similar things in Anaconda
were finding the Anaconda version.
-Roy
> On Feb 27, 2019, at 5:57 PM, robin hankin wrote:
>
> Roy, thanks for this! Your insight explains a great deal of my
> problems. And indeed I see a whole bunch of PATH additions which were
> created by anaconda (these are in .bash_profile, certainly not put
> there by me!).
>
> Just to clarify, I'm not using anaconda by choice, it seems to have
> been installed inadvertently.
>
> stop press: configure works! Thanks!
>
>
> Best wishes
>
> Robin
>
>
>
> hankin.ro...@gmail.com
>
>
>
> hankin.ro...@gmail.com
>
>
>
>
> On Thu, Feb 28, 2019 at 2:47 PM Roy Mendelssohn - NOAA Federal via
> R-SIG-Mac wrote:
>>
>> Anaconda adds code to the end of your ,.profile that can really play havoc
>> with paths in other programs/settings - and off I remember correctly it puts
>> the changes at the front of your $PATH.. I moved that code in .profile to a
>> separate file. When I want anaconda, I just source the file. Makes
>> problems such as that described much less likely. If you are using iTerm2
>> or the like, then you can easily have a tab with the Anaconda paths and the
>> rest of the tabs the more "usual" paths.
>>
>> HTH,
>>
>> -Roy
>>
>>
>>> On Feb 27, 2019, at 5:32 PM, Simon Urbanek
>>> wrote:
>>>
>>> That's anaconda - they don't include paths which is why it breaks
>>> everything until you insert a manual override via DYLD_LIBRARY_PATH. See
>>> Robin's e-mail he is NOT using the system curl, but rather a custom version
>>> from anaconda ("/Users/rhankin/anaconda3/lib").
>>>
>>> Cheers,
>>> Simon
>>>
>>>
>>>
On Feb 25, 2019, at 04:28, peter dalgaard wrote:
Hmm, how did "@rpath" get in there? I don't see it anywhere in my build
and source dirs. Looks like something that should have been substituted
(by perl?) with the appropriate path.
Is your library (...anaconda3/lib) correctly installed? I have, for the
system libcurl:
pd$ ls -l /usr/lib/*curl*
lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib ->
libcurl.4.dylib
-rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib
lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib ->
libcurl.4.dylib
-pd
> On 25 Feb 2019, at 01:28 , robin hankin wrote:
>
> thanks for this Peter, my config.log file looks like this:
>
> configure:42615: result: yes
> configure:42629: checking if libcurl is version 7 and >= 7.22.0
> configure:42658: gcc -o conftest -g -O2
> -I/Users/rhankin/anaconda3/include -I/usr/local/include
> -I/usr/local/include -L/usr/local/lib conftest.c
> -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto
> -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\
> /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv
> >&5
> configure:42658: $? = 0
> configure:42658: ./conftest
> dyld: Library not loaded: @rpath/libcurl.4.dylib
> Referenced from: /Users/rhankin/Downloads/R-devel/./conftest
> Reason: image not found
> ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext
> configure:42658: $? = 134
> configure: program exited with status 134
> configure: failed program was:
> | /* confdefs.h */
> | #define PACKAGE_NAME "R"
> | #define PACKAGE_TARNAME "R"
>
>
>
> Best wishes
>
>
> Robin
>
>
> hankin.ro...@gmail.com
>
>
>
> hankin.ro...@gmail.com
>
>
>
>
> On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote:
>>
>> It doesn't usually happen on 10.13.6... Best guess is that somehow you
>> are picking up an older library (e.g. in /usr/local/lib) even if you are
>> using curl-config from a newer version.
>>
>> The detective work needed could take off from config.log, region around
>> this:
>>
>> configure:39937: checking if libcurl is version 7 and >= 7.22.0
>> configure:39966: gcc -arch x86_64 -o conftest -g -O2
>> -I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma
>> -lbz2 -lz -licucore -lm -liconv >&5
>> configure:39966: $? = 0
>> configure:39966: ./conftest
>> configure:39966: $? =
Re: [R-SIG-Mac] libcurl
Roy, thanks for this! Your insight explains a great deal of my
problems. And indeed I see a whole bunch of PATH additions which were
created by anaconda (these are in .bash_profile, certainly not put
there by me!).
Just to clarify, I'm not using anaconda by choice, it seems to have
been installed inadvertently.
stop press: configure works! Thanks!
Best wishes
Robin
hankin.ro...@gmail.com
hankin.ro...@gmail.com
On Thu, Feb 28, 2019 at 2:47 PM Roy Mendelssohn - NOAA Federal via
R-SIG-Mac wrote:
>
> Anaconda adds code to the end of your ,.profile that can really play havoc
> with paths in other programs/settings - and off I remember correctly it puts
> the changes at the front of your $PATH.. I moved that code in .profile to a
> separate file. When I want anaconda, I just source the file. Makes
> problems such as that described much less likely. If you are using iTerm2
> or the like, then you can easily have a tab with the Anaconda paths and the
> rest of the tabs the more "usual" paths.
>
> HTH,
>
> -Roy
>
>
> > On Feb 27, 2019, at 5:32 PM, Simon Urbanek
> > wrote:
> >
> > That's anaconda - they don't include paths which is why it breaks
> > everything until you insert a manual override via DYLD_LIBRARY_PATH. See
> > Robin's e-mail he is NOT using the system curl, but rather a custom version
> > from anaconda ("/Users/rhankin/anaconda3/lib").
> >
> > Cheers,
> > Simon
> >
> >
> >
> >> On Feb 25, 2019, at 04:28, peter dalgaard wrote:
> >>
> >> Hmm, how did "@rpath" get in there? I don't see it anywhere in my build
> >> and source dirs. Looks like something that should have been substituted
> >> (by perl?) with the appropriate path.
> >>
> >> Is your library (...anaconda3/lib) correctly installed? I have, for the
> >> system libcurl:
> >>
> >> pd$ ls -l /usr/lib/*curl*
> >> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib ->
> >> libcurl.4.dylib
> >> -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib
> >> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib ->
> >> libcurl.4.dylib
> >>
> >> -pd
> >>
> >>
> >>> On 25 Feb 2019, at 01:28 , robin hankin wrote:
> >>>
> >>> thanks for this Peter, my config.log file looks like this:
> >>>
> >>> configure:42615: result: yes
> >>> configure:42629: checking if libcurl is version 7 and >= 7.22.0
> >>> configure:42658: gcc -o conftest -g -O2
> >>> -I/Users/rhankin/anaconda3/include -I/usr/local/include
> >>> -I/usr/local/include -L/usr/local/lib conftest.c
> >>> -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto
> >>> -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\
> >>> /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv
> >>> >&5
> >>> configure:42658: $? = 0
> >>> configure:42658: ./conftest
> >>> dyld: Library not loaded: @rpath/libcurl.4.dylib
> >>> Referenced from: /Users/rhankin/Downloads/R-devel/./conftest
> >>> Reason: image not found
> >>> ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext
> >>> configure:42658: $? = 134
> >>> configure: program exited with status 134
> >>> configure: failed program was:
> >>> | /* confdefs.h */
> >>> | #define PACKAGE_NAME "R"
> >>> | #define PACKAGE_TARNAME "R"
> >>>
> >>>
> >>>
> >>> Best wishes
> >>>
> >>>
> >>> Robin
> >>>
> >>>
> >>> hankin.ro...@gmail.com
> >>>
> >>>
> >>>
> >>> hankin.ro...@gmail.com
> >>>
> >>>
> >>>
> >>>
> >>> On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote:
>
> It doesn't usually happen on 10.13.6... Best guess is that somehow you
> are picking up an older library (e.g. in /usr/local/lib) even if you are
> using curl-config from a newer version.
>
> The detective work needed could take off from config.log, region around
> this:
>
> configure:39937: checking if libcurl is version 7 and >= 7.22.0
> configure:39966: gcc -arch x86_64 -o conftest -g -O2
> -I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma
> -lbz2 -lz -licucore -lm -liconv >&5
> configure:39966: $? = 0
> configure:39966: ./conftest
> configure:39966: $? = 0
> configure:39976: result: yes
>
> That's for a succesful build, a failed one will usually give more info
> including the failing program code.
>
> -pd
>
> > On 24 Feb 2019, at 22:45 , robin hankin wrote:
> >
> > Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152.
> >
> > ./configure
> > [snip]
> >
> > checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config
> > checking libcurl version ... 7.63.0
> > checking curl/curl.h usability... yes
> > checking curl/curl.h presence... yes
> > checking for curl/curl.h... yes
> > checking if libcurl is version 7 and >= 7.22.0... no
> > configure: error: libcurl >= 7.22.0 library and headers are required
> > with support for https
> >
> > if we
Re: [R-SIG-Mac] libcurl
Anaconda adds code to the end of your ,.profile that can really play havoc with
paths in other programs/settings - and off I remember correctly it puts the
changes at the front of your $PATH.. I moved that code in .profile to a
separate file. When I want anaconda, I just source the file. Makes problems
such as that described much less likely. If you are using iTerm2 or the like,
then you can easily have a tab with the Anaconda paths and the rest of the
tabs the more "usual" paths.
HTH,
-Roy
> On Feb 27, 2019, at 5:32 PM, Simon Urbanek
> wrote:
>
> That's anaconda - they don't include paths which is why it breaks everything
> until you insert a manual override via DYLD_LIBRARY_PATH. See Robin's e-mail
> he is NOT using the system curl, but rather a custom version from anaconda
> ("/Users/rhankin/anaconda3/lib").
>
> Cheers,
> Simon
>
>
>
>> On Feb 25, 2019, at 04:28, peter dalgaard wrote:
>>
>> Hmm, how did "@rpath" get in there? I don't see it anywhere in my build and
>> source dirs. Looks like something that should have been substituted (by
>> perl?) with the appropriate path.
>>
>> Is your library (...anaconda3/lib) correctly installed? I have, for the
>> system libcurl:
>>
>> pd$ ls -l /usr/lib/*curl*
>> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib ->
>> libcurl.4.dylib
>> -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib
>> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib ->
>> libcurl.4.dylib
>>
>> -pd
>>
>>
>>> On 25 Feb 2019, at 01:28 , robin hankin wrote:
>>>
>>> thanks for this Peter, my config.log file looks like this:
>>>
>>> configure:42615: result: yes
>>> configure:42629: checking if libcurl is version 7 and >= 7.22.0
>>> configure:42658: gcc -o conftest -g -O2
>>> -I/Users/rhankin/anaconda3/include -I/usr/local/include
>>> -I/usr/local/include -L/usr/local/lib conftest.c
>>> -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto
>>> -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\
>>> /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5
>>> configure:42658: $? = 0
>>> configure:42658: ./conftest
>>> dyld: Library not loaded: @rpath/libcurl.4.dylib
>>> Referenced from: /Users/rhankin/Downloads/R-devel/./conftest
>>> Reason: image not found
>>> ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext
>>> configure:42658: $? = 134
>>> configure: program exited with status 134
>>> configure: failed program was:
>>> | /* confdefs.h */
>>> | #define PACKAGE_NAME "R"
>>> | #define PACKAGE_TARNAME "R"
>>>
>>>
>>>
>>> Best wishes
>>>
>>>
>>> Robin
>>>
>>>
>>> hankin.ro...@gmail.com
>>>
>>>
>>>
>>> hankin.ro...@gmail.com
>>>
>>>
>>>
>>>
>>> On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote:
It doesn't usually happen on 10.13.6... Best guess is that somehow you are
picking up an older library (e.g. in /usr/local/lib) even if you are using
curl-config from a newer version.
The detective work needed could take off from config.log, region around
this:
configure:39937: checking if libcurl is version 7 and >= 7.22.0
configure:39966: gcc -arch x86_64 -o conftest -g -O2
-I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma
-lbz2 -lz -licucore -lm -liconv >&5
configure:39966: $? = 0
configure:39966: ./conftest
configure:39966: $? = 0
configure:39976: result: yes
That's for a succesful build, a failed one will usually give more info
including the failing program code.
-pd
> On 24 Feb 2019, at 22:45 , robin hankin wrote:
>
> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152.
>
> ./configure
> [snip]
>
> checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config
> checking libcurl version ... 7.63.0
> checking curl/curl.h usability... yes
> checking curl/curl.h presence... yes
> checking for curl/curl.h... yes
> checking if libcurl is version 7 and >= 7.22.0... no
> configure: error: libcurl >= 7.22.0 library and headers are required
> with support for https
>
> if we have libcurl 7.63, as it says in the output, why the error? How
> to proceed?
>
> hankin.ro...@gmail.com
>
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk Priv: pda...@gmail.com
>>
>> --
>> Peter Dalgaard, Professor,
>> Center for Statistics, Copenhagen Business School
>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
>>
Re: [R-SIG-Mac] libcurl
That's anaconda - they don't include paths which is why it breaks everything
until you insert a manual override via DYLD_LIBRARY_PATH. See Robin's e-mail he
is NOT using the system curl, but rather a custom version from anaconda
("/Users/rhankin/anaconda3/lib").
Cheers,
Simon
> On Feb 25, 2019, at 04:28, peter dalgaard wrote:
>
> Hmm, how did "@rpath" get in there? I don't see it anywhere in my build and
> source dirs. Looks like something that should have been substituted (by
> perl?) with the appropriate path.
>
> Is your library (...anaconda3/lib) correctly installed? I have, for the
> system libcurl:
>
> pd$ ls -l /usr/lib/*curl*
> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib ->
> libcurl.4.dylib
> -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib
> lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib ->
> libcurl.4.dylib
>
> -pd
>
>
>> On 25 Feb 2019, at 01:28 , robin hankin wrote:
>>
>> thanks for this Peter, my config.log file looks like this:
>>
>> configure:42615: result: yes
>> configure:42629: checking if libcurl is version 7 and >= 7.22.0
>> configure:42658: gcc -o conftest -g -O2
>> -I/Users/rhankin/anaconda3/include -I/usr/local/include
>> -I/usr/local/include -L/usr/local/lib conftest.c
>> -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto
>> -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\
>> /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5
>> configure:42658: $? = 0
>> configure:42658: ./conftest
>> dyld: Library not loaded: @rpath/libcurl.4.dylib
>> Referenced from: /Users/rhankin/Downloads/R-devel/./conftest
>> Reason: image not found
>> ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext
>> configure:42658: $? = 134
>> configure: program exited with status 134
>> configure: failed program was:
>> | /* confdefs.h */
>> | #define PACKAGE_NAME "R"
>> | #define PACKAGE_TARNAME "R"
>>
>>
>>
>> Best wishes
>>
>>
>> Robin
>>
>>
>> hankin.ro...@gmail.com
>>
>>
>>
>> hankin.ro...@gmail.com
>>
>>
>>
>>
>> On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote:
>>>
>>> It doesn't usually happen on 10.13.6... Best guess is that somehow you are
>>> picking up an older library (e.g. in /usr/local/lib) even if you are using
>>> curl-config from a newer version.
>>>
>>> The detective work needed could take off from config.log, region around
>>> this:
>>>
>>> configure:39937: checking if libcurl is version 7 and >= 7.22.0
>>> configure:39966: gcc -arch x86_64 -o conftest -g -O2 -I/usr/local/include
>>> -L/usr/local/lib conftest.c -lcurl -lpcre -llzma -lbz2 -lz -licucore -lm
>>> -liconv >&5
>>> configure:39966: $? = 0
>>> configure:39966: ./conftest
>>> configure:39966: $? = 0
>>> configure:39976: result: yes
>>>
>>> That's for a succesful build, a failed one will usually give more info
>>> including the failing program code.
>>>
>>> -pd
>>>
On 24 Feb 2019, at 22:45 , robin hankin wrote:
Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152.
./configure
[snip]
checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config
checking libcurl version ... 7.63.0
checking curl/curl.h usability... yes
checking curl/curl.h presence... yes
checking for curl/curl.h... yes
checking if libcurl is version 7 and >= 7.22.0... no
configure: error: libcurl >= 7.22.0 library and headers are required
with support for https
if we have libcurl 7.63, as it says in the output, why the error? How
to proceed?
hankin.ro...@gmail.com
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>>>
>>> --
>>> Peter Dalgaard, Professor,
>>> Center for Statistics, Copenhagen Business School
>>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
>>> Phone: (+45)38153501
>>> Office: A 4.23
>>> Email: pd@cbs.dk Priv: pda...@gmail.com
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>
> --
> Peter Dalgaard, Professor,
> Center for Statistics, Copenhagen Business School
> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
> Phone: (+45)38153501
> Office: A 4.23
> Email: pd@cbs.dk Priv: pda...@gmail.com
>
> ___
> R-SIG-Mac mailing list
> R-SIG-Mac@r-project.org
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
___
R-SIG-Mac mailing list
R-SIG-Mac@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
If your goal is to interoperate with Python (esp. when using numpy and friends) then Anaconda is actually a good option... just learn how activate a conda environment before doing anything within that ecosystem and remember that each conda environment you create will be independent of all others. [1] Sadly, it is just a PITA if you are not looking for those interoperability benefits and fail to get on the conda tool bandwagon, so don't take this as advocating for Anaconda in general. FWIW I run both the standard distribution of R and an Anaconda distribution on the same machine, and only use the Anaconda version when I have to... but I have avoided installing R (or any custom Python libraries) into the default Anaconda environment, which may be a key point that makes this work. [1] https://samrelton.wordpress.com/2015/07/02/rconda/amp/ On February 25, 2019 5:28:58 PM PST, robin hankin wrote: >Simon, thanks for this. Can we add your comment to the mac os x FAQ >please?What is the recommended way to install libcurl? > >My feeling is that I have somehow messed up my system so badly that >reimaging is the only way forward. > >hankin.ro...@gmail.com > > > >hankin.ro...@gmail.com > > > > >On Tue, Feb 26, 2019 at 12:32 PM Simon Urbanek > wrote: >> >> You're apparently using anaconda - it means you have to activate it >first because it doesn't include paths in its binaries so ti won't work >without explicit path override. Also note that anaconda is by design >incompatible with the system libraries, so you'll have to make sure >everything you use comes from anacoda or else it won't work. I'd very >strongly suggest not using anaconda when compiling - it pretty much >only works if you use their binaries but nothing else will. >> >> Cheers, >> Simon >> >> >> > On Feb 24, 2019, at 7:28 PM, robin hankin >wrote: >> > >> > thanks for this Peter, my config.log file looks like this: >> > >> > configure:42615: result: yes >> > configure:42629: checking if libcurl is version 7 and >= 7.22.0 >> > configure:42658: gcc -o conftest -g -O2 >> > -I/Users/rhankin/anaconda3/include -I/usr/local/include >> > -I/usr/local/include -L/usr/local/lib conftest.c >> > -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto >> > -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ >> > /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm >-liconv >&5 >> > configure:42658: $? = 0 >> > configure:42658: ./conftest >> > dyld: Library not loaded: @rpath/libcurl.4.dylib >> > Referenced from: /Users/rhankin/Downloads/R-devel/./conftest >> > Reason: image not found >> > ./configure: line 2254: 73408 Abort trap: 6 >./conftest$ac_exeext >> > configure:42658: $? = 134 >> > configure: program exited with status 134 >> > configure: failed program was: >> > | /* confdefs.h */ >> > | #define PACKAGE_NAME "R" >> > | #define PACKAGE_TARNAME "R" >> > >> > >> > >> > Best wishes >> > >> > >> > Robin >> > >> > >> > hankin.ro...@gmail.com >> > >> > >> > >> > hankin.ro...@gmail.com >> > >> > >> > >> > >> > On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard >wrote: >> >> >> >> It doesn't usually happen on 10.13.6... Best guess is that somehow >you are picking up an older library (e.g. in /usr/local/lib) even if >you are using curl-config from a newer version. >> >> >> >> The detective work needed could take off from config.log, region >around this: >> >> >> >> configure:39937: checking if libcurl is version 7 and >= 7.22.0 >> >> configure:39966: gcc -arch x86_64 -o conftest -g -O2 >-I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma >-lbz2 -lz -licucore -lm -liconv >&5 >> >> configure:39966: $? = 0 >> >> configure:39966: ./conftest >> >> configure:39966: $? = 0 >> >> configure:39976: result: yes >> >> >> >> That's for a succesful build, a failed one will usually give more >info including the failing program code. >> >> >> >> -pd >> >> >> >>> On 24 Feb 2019, at 22:45 , robin hankin >wrote: >> >>> >> >>> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. >> >>> >> >>> ./configure >> >>> [snip] >> >>> >> >>> checking for curl-config... >/Users/rhankin/anaconda3/bin/curl-config >> >>> checking libcurl version ... 7.63.0 >> >>> checking curl/curl.h usability... yes >> >>> checking curl/curl.h presence... yes >> >>> checking for curl/curl.h... yes >> >>> checking if libcurl is version 7 and >= 7.22.0... no >> >>> configure: error: libcurl >= 7.22.0 library and headers are >required >> >>> with support for https >> >>> >> >>> if we have libcurl 7.63, as it says in the output, why the error? > How >> >>> to proceed? >> >>> >> >>> hankin.ro...@gmail.com >> >>> >> >>> ___ >> >>> R-SIG-Mac mailing list >> >>> R-SIG-Mac@r-project.org >> >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >> >> >> >> -- >> >> Peter Dalgaard, Professor, >> >> Center for Statistics, Copenhagen Business School >> >> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >> >>
Re: [R-SIG-Mac] libcurl
Simon, thanks for this. Can we add your comment to the mac os x FAQ please?What is the recommended way to install libcurl? My feeling is that I have somehow messed up my system so badly that reimaging is the only way forward. hankin.ro...@gmail.com hankin.ro...@gmail.com On Tue, Feb 26, 2019 at 12:32 PM Simon Urbanek wrote: > > You're apparently using anaconda - it means you have to activate it first > because it doesn't include paths in its binaries so ti won't work without > explicit path override. Also note that anaconda is by design incompatible > with the system libraries, so you'll have to make sure everything you use > comes from anacoda or else it won't work. I'd very strongly suggest not using > anaconda when compiling - it pretty much only works if you use their binaries > but nothing else will. > > Cheers, > Simon > > > > On Feb 24, 2019, at 7:28 PM, robin hankin wrote: > > > > thanks for this Peter, my config.log file looks like this: > > > > configure:42615: result: yes > > configure:42629: checking if libcurl is version 7 and >= 7.22.0 > > configure:42658: gcc -o conftest -g -O2 > > -I/Users/rhankin/anaconda3/include -I/usr/local/include > > -I/usr/local/include -L/usr/local/lib conftest.c > > -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto > > -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ > > /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5 > > configure:42658: $? = 0 > > configure:42658: ./conftest > > dyld: Library not loaded: @rpath/libcurl.4.dylib > > Referenced from: /Users/rhankin/Downloads/R-devel/./conftest > > Reason: image not found > > ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext > > configure:42658: $? = 134 > > configure: program exited with status 134 > > configure: failed program was: > > | /* confdefs.h */ > > | #define PACKAGE_NAME "R" > > | #define PACKAGE_TARNAME "R" > > > > > > > > Best wishes > > > > > > Robin > > > > > > hankin.ro...@gmail.com > > > > > > > > hankin.ro...@gmail.com > > > > > > > > > > On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote: > >> > >> It doesn't usually happen on 10.13.6... Best guess is that somehow you are > >> picking up an older library (e.g. in /usr/local/lib) even if you are using > >> curl-config from a newer version. > >> > >> The detective work needed could take off from config.log, region around > >> this: > >> > >> configure:39937: checking if libcurl is version 7 and >= 7.22.0 > >> configure:39966: gcc -arch x86_64 -o conftest -g -O2 > >> -I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma > >> -lbz2 -lz -licucore -lm -liconv >&5 > >> configure:39966: $? = 0 > >> configure:39966: ./conftest > >> configure:39966: $? = 0 > >> configure:39976: result: yes > >> > >> That's for a succesful build, a failed one will usually give more info > >> including the failing program code. > >> > >> -pd > >> > >>> On 24 Feb 2019, at 22:45 , robin hankin wrote: > >>> > >>> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. > >>> > >>> ./configure > >>> [snip] > >>> > >>> checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config > >>> checking libcurl version ... 7.63.0 > >>> checking curl/curl.h usability... yes > >>> checking curl/curl.h presence... yes > >>> checking for curl/curl.h... yes > >>> checking if libcurl is version 7 and >= 7.22.0... no > >>> configure: error: libcurl >= 7.22.0 library and headers are required > >>> with support for https > >>> > >>> if we have libcurl 7.63, as it says in the output, why the error? How > >>> to proceed? > >>> > >>> hankin.ro...@gmail.com > >>> > >>> ___ > >>> R-SIG-Mac mailing list > >>> R-SIG-Mac@r-project.org > >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > >> > >> -- > >> Peter Dalgaard, Professor, > >> Center for Statistics, Copenhagen Business School > >> Solbjerg Plads 3, 2000 Frederiksberg, Denmark > >> Phone: (+45)38153501 > >> Office: A 4.23 > >> Email: pd@cbs.dk Priv: pda...@gmail.com > >> > >> > >> > >> > >> > >> > >> > >> > >> > > > > ___ > > R-SIG-Mac mailing list > > R-SIG-Mac@r-project.org > > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
You're apparently using anaconda - it means you have to activate it first because it doesn't include paths in its binaries so ti won't work without explicit path override. Also note that anaconda is by design incompatible with the system libraries, so you'll have to make sure everything you use comes from anacoda or else it won't work. I'd very strongly suggest not using anaconda when compiling - it pretty much only works if you use their binaries but nothing else will. Cheers, Simon > On Feb 24, 2019, at 7:28 PM, robin hankin wrote: > > thanks for this Peter, my config.log file looks like this: > > configure:42615: result: yes > configure:42629: checking if libcurl is version 7 and >= 7.22.0 > configure:42658: gcc -o conftest -g -O2 > -I/Users/rhankin/anaconda3/include -I/usr/local/include > -I/usr/local/include -L/usr/local/lib conftest.c > -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto > -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ > /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5 > configure:42658: $? = 0 > configure:42658: ./conftest > dyld: Library not loaded: @rpath/libcurl.4.dylib > Referenced from: /Users/rhankin/Downloads/R-devel/./conftest > Reason: image not found > ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext > configure:42658: $? = 134 > configure: program exited with status 134 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "R" > | #define PACKAGE_TARNAME "R" > > > > Best wishes > > > Robin > > > hankin.ro...@gmail.com > > > > hankin.ro...@gmail.com > > > > > On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote: >> >> It doesn't usually happen on 10.13.6... Best guess is that somehow you are >> picking up an older library (e.g. in /usr/local/lib) even if you are using >> curl-config from a newer version. >> >> The detective work needed could take off from config.log, region around this: >> >> configure:39937: checking if libcurl is version 7 and >= 7.22.0 >> configure:39966: gcc -arch x86_64 -o conftest -g -O2 -I/usr/local/include >> -L/usr/local/lib conftest.c -lcurl -lpcre -llzma -lbz2 -lz -licucore -lm >> -liconv >&5 >> configure:39966: $? = 0 >> configure:39966: ./conftest >> configure:39966: $? = 0 >> configure:39976: result: yes >> >> That's for a succesful build, a failed one will usually give more info >> including the failing program code. >> >> -pd >> >>> On 24 Feb 2019, at 22:45 , robin hankin wrote: >>> >>> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. >>> >>> ./configure >>> [snip] >>> >>> checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config >>> checking libcurl version ... 7.63.0 >>> checking curl/curl.h usability... yes >>> checking curl/curl.h presence... yes >>> checking for curl/curl.h... yes >>> checking if libcurl is version 7 and >= 7.22.0... no >>> configure: error: libcurl >= 7.22.0 library and headers are required >>> with support for https >>> >>> if we have libcurl 7.63, as it says in the output, why the error? How >>> to proceed? >>> >>> hankin.ro...@gmail.com >>> >>> ___ >>> R-SIG-Mac mailing list >>> R-SIG-Mac@r-project.org >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >> >> -- >> Peter Dalgaard, Professor, >> Center for Statistics, Copenhagen Business School >> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >> Phone: (+45)38153501 >> Office: A 4.23 >> Email: pd@cbs.dk Priv: pda...@gmail.com >> >> >> >> >> >> >> >> >> > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
thanks Peter, my results are: rstudio % ls -l /usr/lib/*curl* lrwxr-xr-x 1 root wheel 15 4 Dec 2017 /usr/lib/libcurl.3.dylib -> libcurl.4.dylib -rwxr-xr-x 1 root wheel 854416 4 Jul 2018 /usr/lib/libcurl.4.dylib lrwxr-xr-x 1 root wheel 15 4 Dec 2017 /usr/lib/libcurl.dylib -> libcurl.4.dylib rstudio % not quite the same version of libcurl4.dylib but otherwise the same hankin.ro...@gmail.com hankin.ro...@gmail.com On Mon, Feb 25, 2019 at 10:28 PM peter dalgaard wrote: > > Hmm, how did "@rpath" get in there? I don't see it anywhere in my build and > source dirs. Looks like something that should have been substituted (by > perl?) with the appropriate path. > > Is your library (...anaconda3/lib) correctly installed? I have, for the > system libcurl: > > pd$ ls -l /usr/lib/*curl* > lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib -> > libcurl.4.dylib > -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib > lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib -> > libcurl.4.dylib > > -pd > > > > On 25 Feb 2019, at 01:28 , robin hankin wrote: > > > > thanks for this Peter, my config.log file looks like this: > > > > configure:42615: result: yes > > configure:42629: checking if libcurl is version 7 and >= 7.22.0 > > configure:42658: gcc -o conftest -g -O2 > > -I/Users/rhankin/anaconda3/include -I/usr/local/include > > -I/usr/local/include -L/usr/local/lib conftest.c > > -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto > > -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ > > /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5 > > configure:42658: $? = 0 > > configure:42658: ./conftest > > dyld: Library not loaded: @rpath/libcurl.4.dylib > > Referenced from: /Users/rhankin/Downloads/R-devel/./conftest > > Reason: image not found > > ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext > > configure:42658: $? = 134 > > configure: program exited with status 134 > > configure: failed program was: > > | /* confdefs.h */ > > | #define PACKAGE_NAME "R" > > | #define PACKAGE_TARNAME "R" > > > > > > > > Best wishes > > > > > > Robin > > > > > > hankin.ro...@gmail.com > > > > > > > > hankin.ro...@gmail.com > > > > > > > > > > On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote: > >> > >> It doesn't usually happen on 10.13.6... Best guess is that somehow you are > >> picking up an older library (e.g. in /usr/local/lib) even if you are using > >> curl-config from a newer version. > >> > >> The detective work needed could take off from config.log, region around > >> this: > >> > >> configure:39937: checking if libcurl is version 7 and >= 7.22.0 > >> configure:39966: gcc -arch x86_64 -o conftest -g -O2 > >> -I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma > >> -lbz2 -lz -licucore -lm -liconv >&5 > >> configure:39966: $? = 0 > >> configure:39966: ./conftest > >> configure:39966: $? = 0 > >> configure:39976: result: yes > >> > >> That's for a succesful build, a failed one will usually give more info > >> including the failing program code. > >> > >> -pd > >> > >>> On 24 Feb 2019, at 22:45 , robin hankin wrote: > >>> > >>> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. > >>> > >>> ./configure > >>> [snip] > >>> > >>> checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config > >>> checking libcurl version ... 7.63.0 > >>> checking curl/curl.h usability... yes > >>> checking curl/curl.h presence... yes > >>> checking for curl/curl.h... yes > >>> checking if libcurl is version 7 and >= 7.22.0... no > >>> configure: error: libcurl >= 7.22.0 library and headers are required > >>> with support for https > >>> > >>> if we have libcurl 7.63, as it says in the output, why the error? How > >>> to proceed? > >>> > >>> hankin.ro...@gmail.com > >>> > >>> ___ > >>> R-SIG-Mac mailing list > >>> R-SIG-Mac@r-project.org > >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > >> > >> -- > >> Peter Dalgaard, Professor, > >> Center for Statistics, Copenhagen Business School > >> Solbjerg Plads 3, 2000 Frederiksberg, Denmark > >> Phone: (+45)38153501 > >> Office: A 4.23 > >> Email: pd@cbs.dk Priv: pda...@gmail.com > >> > >> > >> > >> > >> > >> > >> > >> > >> > > -- > Peter Dalgaard, Professor, > Center for Statistics, Copenhagen Business School > Solbjerg Plads 3, 2000 Frederiksberg, Denmark > Phone: (+45)38153501 > Office: A 4.23 > Email: pd@cbs.dk Priv: pda...@gmail.com > > > > > > > > > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
Hmm, how did "@rpath" get in there? I don't see it anywhere in my build and source dirs. Looks like something that should have been substituted (by perl?) with the appropriate path. Is your library (...anaconda3/lib) correctly installed? I have, for the system libcurl: pd$ ls -l /usr/lib/*curl* lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.3.dylib -> libcurl.4.dylib -rwxr-xr-x 1 root wheel 854208 Nov 30 08:37 /usr/lib/libcurl.4.dylib lrwxr-xr-x 1 root wheel 15 Nov 14 14:36 /usr/lib/libcurl.dylib -> libcurl.4.dylib -pd > On 25 Feb 2019, at 01:28 , robin hankin wrote: > > thanks for this Peter, my config.log file looks like this: > > configure:42615: result: yes > configure:42629: checking if libcurl is version 7 and >= 7.22.0 > configure:42658: gcc -o conftest -g -O2 > -I/Users/rhankin/anaconda3/include -I/usr/local/include > -I/usr/local/include -L/usr/local/lib conftest.c > -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto > -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ > /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5 > configure:42658: $? = 0 > configure:42658: ./conftest > dyld: Library not loaded: @rpath/libcurl.4.dylib > Referenced from: /Users/rhankin/Downloads/R-devel/./conftest > Reason: image not found > ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext > configure:42658: $? = 134 > configure: program exited with status 134 > configure: failed program was: > | /* confdefs.h */ > | #define PACKAGE_NAME "R" > | #define PACKAGE_TARNAME "R" > > > > Best wishes > > > Robin > > > hankin.ro...@gmail.com > > > > hankin.ro...@gmail.com > > > > > On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote: >> >> It doesn't usually happen on 10.13.6... Best guess is that somehow you are >> picking up an older library (e.g. in /usr/local/lib) even if you are using >> curl-config from a newer version. >> >> The detective work needed could take off from config.log, region around this: >> >> configure:39937: checking if libcurl is version 7 and >= 7.22.0 >> configure:39966: gcc -arch x86_64 -o conftest -g -O2 -I/usr/local/include >> -L/usr/local/lib conftest.c -lcurl -lpcre -llzma -lbz2 -lz -licucore -lm >> -liconv >&5 >> configure:39966: $? = 0 >> configure:39966: ./conftest >> configure:39966: $? = 0 >> configure:39976: result: yes >> >> That's for a succesful build, a failed one will usually give more info >> including the failing program code. >> >> -pd >> >>> On 24 Feb 2019, at 22:45 , robin hankin wrote: >>> >>> Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. >>> >>> ./configure >>> [snip] >>> >>> checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config >>> checking libcurl version ... 7.63.0 >>> checking curl/curl.h usability... yes >>> checking curl/curl.h presence... yes >>> checking for curl/curl.h... yes >>> checking if libcurl is version 7 and >= 7.22.0... no >>> configure: error: libcurl >= 7.22.0 library and headers are required >>> with support for https >>> >>> if we have libcurl 7.63, as it says in the output, why the error? How >>> to proceed? >>> >>> hankin.ro...@gmail.com >>> >>> ___ >>> R-SIG-Mac mailing list >>> R-SIG-Mac@r-project.org >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >> >> -- >> Peter Dalgaard, Professor, >> Center for Statistics, Copenhagen Business School >> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >> Phone: (+45)38153501 >> Office: A 4.23 >> Email: pd@cbs.dk Priv: pda...@gmail.com >> >> >> >> >> >> >> >> >> -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Office: A 4.23 Email: pd@cbs.dk Priv: pda...@gmail.com ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
thanks for this Peter, my config.log file looks like this: configure:42615: result: yes configure:42629: checking if libcurl is version 7 and >= 7.22.0 configure:42658: gcc -o conftest -g -O2 -I/Users/rhankin/anaconda3/include -I/usr/local/include -I/usr/local/include -L/usr/local/lib conftest.c -L/Users/rhankin/anaconda3/lib -lcurl -lssh2 -lssh2 -lssl -lcrypto -lssl -lcrypto -lgssapi_krb5 -lresolv -lz -L/usr\ /local/lib -lpcre2-8 -lpcre -llzma -lbz2 -lz -licucore -ldl -lm -liconv >&5 configure:42658: $? = 0 configure:42658: ./conftest dyld: Library not loaded: @rpath/libcurl.4.dylib Referenced from: /Users/rhankin/Downloads/R-devel/./conftest Reason: image not found ./configure: line 2254: 73408 Abort trap: 6 ./conftest$ac_exeext configure:42658: $? = 134 configure: program exited with status 134 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "R" | #define PACKAGE_TARNAME "R" Best wishes Robin hankin.ro...@gmail.com hankin.ro...@gmail.com On Mon, Feb 25, 2019 at 11:41 AM peter dalgaard wrote: > > It doesn't usually happen on 10.13.6... Best guess is that somehow you are > picking up an older library (e.g. in /usr/local/lib) even if you are using > curl-config from a newer version. > > The detective work needed could take off from config.log, region around this: > > configure:39937: checking if libcurl is version 7 and >= 7.22.0 > configure:39966: gcc -arch x86_64 -o conftest -g -O2 -I/usr/local/include > -L/usr/local/lib conftest.c -lcurl -lpcre -llzma -lbz2 -lz -licucore -lm > -liconv >&5 > configure:39966: $? = 0 > configure:39966: ./conftest > configure:39966: $? = 0 > configure:39976: result: yes > > That's for a succesful build, a failed one will usually give more info > including the failing program code. > > -pd > > > On 24 Feb 2019, at 22:45 , robin hankin wrote: > > > > Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. > > > > ./configure > > [snip] > > > > checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config > > checking libcurl version ... 7.63.0 > > checking curl/curl.h usability... yes > > checking curl/curl.h presence... yes > > checking for curl/curl.h... yes > > checking if libcurl is version 7 and >= 7.22.0... no > > configure: error: libcurl >= 7.22.0 library and headers are required > > with support for https > > > > if we have libcurl 7.63, as it says in the output, why the error? How > > to proceed? > > > > hankin.ro...@gmail.com > > > > ___ > > R-SIG-Mac mailing list > > R-SIG-Mac@r-project.org > > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > -- > Peter Dalgaard, Professor, > Center for Statistics, Copenhagen Business School > Solbjerg Plads 3, 2000 Frederiksberg, Denmark > Phone: (+45)38153501 > Office: A 4.23 > Email: pd@cbs.dk Priv: pda...@gmail.com > > > > > > > > > ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
Re: [R-SIG-Mac] libcurl
It doesn't usually happen on 10.13.6... Best guess is that somehow you are picking up an older library (e.g. in /usr/local/lib) even if you are using curl-config from a newer version. The detective work needed could take off from config.log, region around this: configure:39937: checking if libcurl is version 7 and >= 7.22.0 configure:39966: gcc -arch x86_64 -o conftest -g -O2 -I/usr/local/include -L/usr/local/lib conftest.c -lcurl -lpcre -llzma -lbz2 -lz -licucore -lm -liconv >&5 configure:39966: $? = 0 configure:39966: ./conftest configure:39966: $? = 0 configure:39976: result: yes That's for a succesful build, a failed one will usually give more info including the failing program code. -pd > On 24 Feb 2019, at 22:45 , robin hankin wrote: > > Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. > > ./configure > [snip] > > checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config > checking libcurl version ... 7.63.0 > checking curl/curl.h usability... yes > checking curl/curl.h presence... yes > checking for curl/curl.h... yes > checking if libcurl is version 7 and >= 7.22.0... no > configure: error: libcurl >= 7.22.0 library and headers are required > with support for https > > if we have libcurl 7.63, as it says in the output, why the error? How > to proceed? > > hankin.ro...@gmail.com > > ___ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Office: A 4.23 Email: pd@cbs.dk Priv: pda...@gmail.com ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
[R-SIG-Mac] libcurl
Hi, macos 10.13.6, trying to compile 3.6.0, revision 76152. ./configure [snip] checking for curl-config... /Users/rhankin/anaconda3/bin/curl-config checking libcurl version ... 7.63.0 checking curl/curl.h usability... yes checking curl/curl.h presence... yes checking for curl/curl.h... yes checking if libcurl is version 7 and >= 7.22.0... no configure: error: libcurl >= 7.22.0 library and headers are required with support for https if we have libcurl 7.63, as it says in the output, why the error? How to proceed? hankin.ro...@gmail.com ___ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
