Re: [Bioc-devel] Build errors from recent breaking ggplot2 changes

2024-02-27 Thread Kern, Lori via Bioc-devel
We often don't like having to do a manual uninstall / reinstall of a package because that will not fix the issue for any typical user on their local system. It would be best to have complexupset bump there version so that everyone (universally) would get a fresh install. Hopefully they would

Re: [Bioc-devel] Build errors from recent breaking ggplot2 changes

2024-02-27 Thread Vincent Carey
thanks for the report, we will discuss this today. it should be possible to address this soon. On Tue, Feb 27, 2024 at 6:02 AM Stevie Pederson < stephen.pederson...@gmail.com> wrote: > Hi, > > I have the package ComplexUpset as a dependency for some packages and the > recent changes to ggplot2

Re: [Bioc-devel] Question about cstack usage error

2024-02-27 Thread Vincent Carey
can you build a reprex for gplots? we are stretched very thin right now and i am sorry to say i don't see this as actionable in our group. On Tue, Feb 27, 2024 at 2:36 AM Johannes Griss < johannes.gr...@meduniwien.ac.at> wrote: > Hi, > > We've been encountering a cstack related error on the

[Bioc-devel] Build errors from recent breaking ggplot2 changes

2024-02-27 Thread Stevie Pederson
Hi, I have the package ComplexUpset as a dependency for some packages and the recent changes to ggplot2 v3.5.0 have thrown a spanner in the works. ComplexUpset calls `theme_minimal()` internally, but it appears that after updating to ggplot2 v3.5.0 locally this specific call is still returning