Yes, I've added the line of code you suggested to the workflows and it
solves the problems for Windows, thank you very much! Since it appears
to be a common problem for macOS we will proceed with submission then,
thank you again (Sorry for the reply all)
Il 30/07/2020 11:47, Henrik Bengtsson
(I assume you just forgot to 'Reply All' so I've added bioc-devel back
to the cc:)
> Unfortunately what I'm mentioning only happens in Github actions, which
> are the standard ones (we used usethis::use_github_action_check_standard),
I'd say that that 'usethis' setup did not anticipate package
>From a very quick look at this, I think you also need to explicitly
install the package itself for it to be available in external R
session (contrary to when using forked processing as on Linux and
macOS). Something like this:
- name: Install dependencies
run: |
Hi bioconductor team,
we are currently developing a package for future submission on
bioconductor which you can find here
https://github.com/calabrialab/ISAnalytics.
We use Github actions to keep track of R cmd checks at every commit, and
this time, surprisingly for us, we had a failure on
