It's a bit late, but I'll point out that the use of R-devel dates back 20y
to the inception of the Bioconductor project. So this is the way it has
always been. Of course, this is an argument of conservatism which is always
dangerous, But at least it illustrates that this is not a small change to
Dear Henrik,
thank you very much for pointing me to the rig project. It works fine and I
have two independent R versions on my machine at the moment.
Thank you,
Anatoly
On Tue, Apr 9, 2024 at 4:19 AM Henrik Bengtsson
wrote:
> > ... I'm on Mac OS 12.5.
>
> I've heard good things about 'rig'
try installing on 2.0 even though the
> combination has never been tested? Maybe I worry too much about such testing
> since CRAN seems OK anyways, as far as we know?
> ________
> From: Bioc-devel on behalf of Anatoly
> Sorokin
> Sent: Thursday, Ap
> ... I'm on Mac OS 12.5.
I've heard good things about 'rig' (The R Installation Manager;
https://github.com/r-lib/rig). It can install multiple R versions in
parallel on macOS, Windows, and Linux, without the different versions
conflicting with each other. I recommend trying it out, because
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behalf of Vincent Carey
Sent: Friday, April 5, 2024 6:51 AM
To: Anatoly Sorokin
Cc: bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Important Bioconductor Release Deadlines
On Fri, Apr
in communicating the limitation you've encountered and
hope it can be resolved without too much pain. If there are changes we can make
within the basic framework of R-bioc symbiosis that I've tried to
sketch, let's try
to articulate them.
Best wishes
Vince Carey
>
> Cheers,
> Anatoly
>
&
stable version
of the platform. I did not sign up as an R beta tester.
Cheers,
Anatoly
--
> *From:* Bioc-devel on behalf of
> Anatoly Sorokin
> *Sent:* Thursday, April 4, 2024 10:28:47 PM
> *To:* Kern, Lori
> *Cc:* bioc-devel@r-project.org
> *Subject:* Re:
l@r-project.org
Subject: Re: [Bioc-devel] Important Bioconductor Release Deadlines
Hi all,
I'm sorry for the complaint, but do you really think it is wise to make the
new release dependent on the R version which has not released yet?
I have a lot of R-related projects going on apart from maintain
Hi Henrik,
thank you for the prompt reply. I'm on Mac OS 12.5.
And regarding the linking version of Bioconductor and R my major complaint
is the timing, if R 4.4 hasn't been released yet, why not postpone this
dependency to the October release of Bioconductor?
And it is also true that we have a
Hello,
these days, it's quite straight forward to have multiple versions of R
installed in parallel without them conflicting with each other. I know
it works out of the box on MS Windows (just install all versions you'd
like), and I know there are various tools to achieve the same on
macOS. I'm
Hi all,
I'm sorry for the complaint, but do you really think it is wise to make the
new release dependent on the R version which has not released yet?
I have a lot of R-related projects going on apart from maintaining the
Bioconductor package and I'm not comfortable installing the unreleased
Import update: The Bioconductor Release will be May 1 following the release of
R 4.4 on April 24.
The Bioconductor 3.18 branch will be frozen Monday April 15th. After that date,
no changes will be permitted ever on that branch.
The deadline for devel Bioconductor 3.19 for packages to pass R
Reminder:
The final day to submit packages to the contribution tracker to attempt to be
included in the Bioconductor 3.19 release is Friday March 22nd. Submission by
this date does not guarantee inclusion, the package must still undergo an
official review and be accepted by April 17th.
The final day to submit packages to the contribution tracker to attempt to be
included in the Bioconductor 3.18 release is Friday September 29th.
Submission by this date does not guarantee inclusion, the package must still
undergo an official review and be accepted by October 18th.
Please
Please remember, The Bioconductor 3.16 branch will be frozen Monday April
10th. After that date, no changes will be permitted ever on that branch.
The deadline for devel Bioconductor 3.17 for packages to pass R CMD build and R
CMD check is April 21th. While you will still be able to make
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