Coot is not (yet) an official part of brewsci, so the goocanvas update
bonked coot.
This morning I uninstalled my coot and rebuilt it with YoshitakaMo's
coot.rb. The second time it worked (i.e. build and installed just fine).
You can see from the patch
Hi everyone,
The deadline to submit a screening proposal to the LCLS XFEL has been
extended! For delicate crystals and/or for crystals available in lower
quantities, the standard goniometer setup at LCLS-MFX is a useful option
available to all general users applying for beamtime.
See below for
Dear Matt,
Your data past 2.5A is awfully weak, and wont contribute much to any map
you calculate. Each term at the outer resolution will have a very low
weight.
I sometimes cling to the belief that the weak data may help the B factor
refinement, but there isnt much evidence of that. There is a
Is the data anisotropic? This would explain the strange processing
statistics beyond 3.0 Angstrom. If using Dials directly it is worth
looking for abnormalities with the reciprocal lattice viewer.
I've seen similar issues with the completeness being low, when data is
weak in one direction,
Dear Matt,
thank you for asking. I am bit confused how you set up the PAIREF run.
In paired refinement, data are added step by step - going to higher
resolution, i.e. lower d_hkl. So the merged data in the PAIREF input
should not be cut to much. The data statistics look from DIALS quite
Hi all,
I am having a bit of trouble with PAIREF. I am trying to determine the
resolution cutoff of a dataset which has a high Rwork (0.223)/free (0.275)value
for the resolution (2.24A). I have truncated this data further to 2.4A and the
R values get better but the electron density maps do
homebrew heavy-handedly wiped out coocanvas v. 2 when upgrading.
I made a temp fix with a sym link as follows:
ln -s /usr/local/Cellar/goocanvas/3.0.0/lib/libgoocanvas-3.0.9.dylib
/usr/local/lib/libgoocanvas-2.0.9.dylib
your path prefix will be different, but you get the idea.
> On Sep 30,
Hi All,
I am having an issue with installing coot. Here is the outcome when I type
coot in command line. I am using M1 mac pro. Thank you.
Best regards
Tim
CSI363227 ~ % coot
dyld[11265]: Library not loaded:
'/opt/homebrew/opt/goocanvas/lib/libgoocanvas-2.0.9.dylib'
Referenced from:
Dear colleagues,
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in the lab of Thomas Krey, Institute of Biochemistry, University of Luebeck
(Germany). Our group is interested in the study of viruses that constitute a
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Hi all,
Registration is now open for our next Industry Talk. It will take place on
Thursday 20 October 2022 from 2pm UK time. It will be on Zoom and registration
is free but required to get the webinar link. The speakers are Alex R. Jones
and Amy E. Danson from the National Physical Laboratory
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