Re: [ccp4bb] Processing problem

2011-09-29 Thread harry powell
. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] P21/n spacegroup

2011-09-27 Thread Harry Powell
- http://enigmail.mozdev.org/ iD8DBQFOgdLcUxlJ7aRr7hoRAo5MAJ4vkVBVrMEpnNKmmiqi3IlUP2D5YACfZaFB GVfWgppK3ekgndBv/cQJhHg= =j2p2 -END PGP SIGNATURE- Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH http://www.iucr.org/resources

Re: [ccp4bb] Mac OSX 10.7 Lion

2011-09-10 Thread harry powell
/Lion_upgrade_notes All the best, Bill On Sep 9, 2011, at 1:28 AM, Phil Evans wrote: Is there any opinion or experience about whether Lion is ready for crystallographic use? Should I upgrade? Phil William G. Scott Contact info: http://chemistry.ucsc.edu/~wgscott/ Harry -- Dr Harry Powell

Re: [ccp4bb] how to estimate the error of unit cell parameters

2011-07-25 Thread harry powell
of crystal? Thank you very much! Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] hkl2map on Mac OSX 10.6

2011-07-15 Thread Harry Powell
, MD 21205 Phone: +1-410-614-4742 Lab: +1-410-614-4894 Fax: +1-410-955-3655 http://web.mac.com/bosch_lab/ Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH http://www.iucr.org/resources/commissions/crystallographic

[ccp4bb] Fwd: [ccp4bb] Beta test versions of Mosflm iMosflm

2011-07-09 Thread harry powell
the URL ftp://ftp.mrc-lmb.cam.ac.uk/pub/pre/ Note that he doesn't have a Windows build... Begin forwarded message: From: Phil Evans p...@mrc-lmb.cam.ac.uk Date: 8 July 2011 17:27:43 BDT To: Harry Powell ha...@mrc-lmb.cam.ac.uk Subject: Re: [ccp4bb] Beta test versions of Mosflm iMosflm I note you

Re: [ccp4bb] Potential Space Group Issue

2011-07-09 Thread harry powell
and Women's Hospital Visiting Research Scholar, Brandeis University -- -- Raji Edayathumangalam Instructor in Neurology, Harvard Medical School Research Associate, Brigham and Women's Hospital Visiting Research Scholar, Brandeis University Harry -- Dr Harry Powell, MRC

Re: [ccp4bb] Crystallographic Computing School - Mieres, Spain

2011-07-08 Thread Harry Powell
/mieres2011 Unfortunately we have no more bursaries! On 2 Mar 2011, at 18:24, harry powell wrote: Dear all The registration website is now live - see http://www.iucr.org/resources/commissions/crystallographic-computing/schools/mieres2011 We had to change venue at a late stage, so

[ccp4bb] Beta test versions of Mosflm iMosflm

2011-07-08 Thread Harry Powell
. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH http://www.iucr.org/resources/commissions/crystallographic-computing/schools/mieres2011

Re: [ccp4bb] Mosflm problem with CBF file

2011-05-24 Thread Harry Powell
, Allan -- Allan Pang PhD Student G35 Joseph Priestley Building Queen Mary University of London London E1 4NS Phone number: 02078828480 Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH http://www.iucr.org/resources

[ccp4bb] Fwd: IUCr 2011 - AUGUST 22 - 30

2011-04-20 Thread Harry Powell
AL SECRETARIAT:GRUPO PACIFICOPaseo General Martínez Campos, 44, 1º28010 Madrid - SPAINTel. (34) 913.836.000 ext. 127Fax. (34) 913.023.926iucr2...@pacificio-meetings.comwww.iucr2011madrid.es Harry--Dr Harry Powell, MRC Laboratory of MolecularBiology, MRC Centre, Hills Road, Cambridge,CB2 0QHhttp://ww

Re: [ccp4bb] XXII IUCr Congress and General Assembly - Madrid (Spain)

2011-04-15 Thread Harry Powell
) Dr. Martin Martinez-Ripoll Research Professor xmar...@iqfr.csic.es Department of Crystallography Structural Biology www.xtal.iqfr.csic.es Telf.: +34 917459550 Consejo Superior de Investigaciones Científicas Spanish National Research Council www.csic.es image003.jpg Harry -- Dr Harry

Re: [ccp4bb] XXII IUCr Congress and General Assembly - Madrid (Spain)

2011-04-15 Thread Harry Powell
28 (no doubt to enable everyone to work until the last minute prior to the royal wedding ...). Can you confirm? With best wishes, Gerard. -- On Fri, Apr 15, 2011 at 11:39:14AM +0100, Harry Powell wrote: Hi folks today is the last day to get your abstract in! On 7

Re: [ccp4bb] xds question: inverse beam, lots of wedges

2011-04-01 Thread Harry Powell
. Cheers, Pat Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] X-Ray films

2011-03-27 Thread harry powell
, Bellport, NY 11713-2803 * * *** *Frances C. Bernstein * *** f...@bernstein-plus-sons.com *** * * *** 1-631-286-1339FAX: 1-631-286-1999 = Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills

Re: [ccp4bb] Crystallographic Computing School - Mieres, Spain

2011-03-02 Thread harry powell
up the road. On 8 Jan 2011, at 11:33, harry powell wrote: Dear all Those of you who attended the CCP4 Study Weekend at Warwick University this week (either in vivo or in silico), and who stayed to the end will remember Roberto Steiner's suggestion that some of the younger members

Re: [ccp4bb] strange density

2011-02-25 Thread Harry Powell
Biochemistry University of California, Los Angeles mi...@chem.ucla.edu Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] strange density

2011-02-25 Thread Harry Powell
Hi folks Whoops, brain not engaged before hitting send. Lewis acid/bases are to do with electron-pair donor/acceptance, Brønsted acid/bases with protons. So my second two paragraphs define things the wrong way round. I need a coffee... On 25 Feb 2011, at 10:49, Harry Powell wrote: Hi

Re: [ccp4bb] Strage image

2011-02-20 Thread harry powell
in the past! On 20 Feb 2011, at 13:46, Vandu Murugan wrote: Dear All, I mounted an aggregate with spikes on surface, that I saw in a well, and got a image attached with this. It has concentric rings.. What it could be? Any comments on it...? thanks, - Wandu image1.png Harry -- Dr Harry

Re: [ccp4bb] superposing (hkl) indexes on diffraction image

2011-02-13 Thread harry powell
r3 image hg_001.mar1600 xgui on go predict_spots create_image type ppm prediction on binary true filename junk.ppm return exit Thanks to the anonymous user (still wearing shorts, even in February...) who pointed this out! On 8 Dec 2010, at 16:16, Harry Powell wrote: Hi Keitaro

Re: [ccp4bb] iMosflm execution error - solved?

2011-01-31 Thread Harry Powell
Ithaca, NY 14853-1301 = Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

[ccp4bb] Crystallographic Computing School - Mieres, Spain

2011-01-08 Thread harry powell
finalising items such as the registration fee, but I expect to be able to make the website live by the end of January with more comprehensive details. Watch this space... Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH Treasurer British

[ccp4bb] Release of Mosflm 7.0.7 iMosflm 1.0.5

2010-12-22 Thread Harry Powell
communications with iMosflm. Harry, Andrew Owen -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Fwd: [ccp4bb] Wyckoff positions and protein atoms

2010-12-16 Thread Harry Powell
Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] superposing (hkl) indexes on diffraction image

2010-12-08 Thread Harry Powell
very much in advance, K. Yamashita Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] superposing (hkl) indexes on diffraction image

2010-12-08 Thread Harry Powell
* I'm using Mosflm 7.0.6. Since I'd like to automatically make pictures of several frames with prediction boxes, so I'm trying to do that in ipmosflm. Thank you for advice in advance, K. Yamashita 2010/12/8 Harry Powell ha...@mrc-lmb.cam.ac.uk: Hi Keitaro Mosflm has

Re: [ccp4bb] How to use XDS programme to process data collected at Q315r detector

2010-12-08 Thread Harry Powell
and what error I made for using this script. Thank you very much for any suggestion. Best regards, Donghui Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] superposing (hkl) indexes on diffraction image

2010-12-08 Thread Harry Powell
Harry Powell ha...@mrc-lmb.cam.ac.uk: Hi Keitaro You should get the predictions on the images using Mosflm if you supply a matrix spacegroup. Running the create_image part after indexing in iMosflm means that the matrix, symmetry and mosaic spread are all available, so it can be easier

Re: [ccp4bb] Space group and R/Rfree value

2010-12-01 Thread harry powell
with P212121 only to 26/30. Also Phenix points out that the crystal is probably a twin with P212121 but is OK with C2221. I am not a real crystallographer, perhaps this problem is stupid, any help will be appreciated!! Best wishes, Xiaopeng Hu Harry -- Dr Harry Powell, MRC Laboratory

Re: [ccp4bb] Problems with auto-indexing

2010-11-29 Thread Harry Powell
of Molucular Replacement. This confused me a lot. Is what I thought wrong? Or is the very crystal that was indexed a special one? Thanks all chen normal.jpgmore typical-1.jpg Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] unusual diffraction spots

2010-11-25 Thread Harry Powell
be transmitted in or with the message. Diamond Light Source Limited (company no. 4375679). Registered in England and Wales with its registered office at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom Harry -- Dr Harry Powell, MRC

Re: [ccp4bb] bruker smart and mosflm

2010-11-09 Thread Harry Powell
of Lemurs Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] High Rmerge with thin frames

2010-11-06 Thread harry powell
scripts for processing Pilatus data with XDS. On 5 Nov 2010, at 18:33, Martin Hallberg wrote: Hi Harry, On Nov 5, 2010, at 5:45 PM, Harry Powell wrote: I think there may be issues with collecting data too finely with a Pilatus, even in shutterless mode. I don't know where the problems arise

Re: [ccp4bb] High Rmerge with thin frames

2010-11-05 Thread Harry Powell
that for these very weak diffracting plates (submicron) collecting 0.5-1.0 degrees was actually giving at the end better data. A. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Regarding space group P1, P21

2010-10-21 Thread Harry Powell
to hear your suggestions. Kind regards, Mohinder Pal Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] stereo (again - sigh)

2010-10-05 Thread Harry Powell
| http://hms.harvard.edu | Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] iMosflm 1.0.4 - font size

2010-08-17 Thread harry powell
Van Hecke, PhD Biomolecular Architecture Celestijnenlaan 200F 3001 Heverlee (Leuven) Belgium --- Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] imosflm on MAC OSX

2010-07-14 Thread harry powell
...@iqfr.csic.es Department of Crystallography Structural Biology www.xtal.iqfr.csic.es Consejo Superior de Investigaciones Científicas Spanish National Research Council www.csic.es image001.jpg Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] How to make fft-map more physically meaningful?

2010-07-09 Thread Harry Powell
Lunin, 1988, Acta Cryst A). Moreover, these points even contain some information and can be used for example to identify the macromolecular region (since the deepest minima are usually close to the highest maxima). With best regards, Sacha Harry -- Dr Harry Powell, MRC Laboratory

Re: [ccp4bb] imosflm conflict with mosflm (OS X/fink 32-bit)

2010-07-06 Thread Harry Powell
Scholar Laboratory of K. Christopher Garcia Howard Hughes Medical Institute Dept of Molecular and Cellular Physiology 279 Campus Drive, Beckman Center B173 Stanford School of Medicine Stanford, CA 94305 ph: (650)-498-7111 Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre

Re: [ccp4bb] Scaling question

2010-06-09 Thread harry powell
? If so am I right to not worry about contamination from extrapolated peaks when combining high and low resolution datasets from the same crystal? Thanks Simon Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Anisotropic data and an extremely long c axis

2010-06-09 Thread harry powell
work with has a tetragonal sg with a=b= 86.0 and an extremely long c axis of 651 A. Secondary Structure prediction suggest a lot of beta strands. How can I explain the anisotropy (for my own interest and my thesis)? Thank you very much. Marie Harry -- Dr Harry Powell, MRC Laboratory

Re: [ccp4bb] mosflm in script mode

2010-05-28 Thread Harry Powell
: JAbendroth_at_embios.com http://www.emeraldbiostructures.com Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Processing compressed diffraction images?

2010-05-06 Thread Harry Powell
to spend a fortune, particularly if there are ways of making the software more efficient, which after all will benefit everyone. Cheers -- Ian Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

[ccp4bb] X-Ray films

2010-04-15 Thread harry powell
it should be favorite... I'm a little tired, but the only one I can think of at the moment is actually based on results from fibre diffraction - Life Story, with Jeff Goldblum. There must be others, though. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, Hills Road, Cambridge

Re: [ccp4bb] Display x-ray images in windows

2010-03-23 Thread Harry Powell
to display x-ray (.img) data images in windows? Thanks, P. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Release of Mosflm version 7.0.6 and iMosflm 1.0.4

2010-02-03 Thread harry powell
at a Linux command prompt) This problem does not affect any other executables (i.e. Linux 64- bit, Linux built with gfortran, OSX and Windows versions are all fine). Apologies the 120 people who downloaded the broken copies! On 2 Feb 2010, at 16:55, Harry Powell wrote: Hi folks We are pleased

[ccp4bb] Release of Mosflm version 7.0.6 and iMosflm 1.0.4

2010-02-02 Thread Harry Powell
of overloaded reflections in detector refinement * Mac OS X App - drag and drop into your Applications folder and it should run like a normal point-and-click application. Harry and Andrew -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Using own orientation matrix with imosflm.

2009-10-27 Thread Harry Powell
the matrix file under 'Images', but I cannot integrate. Thanks FR - Francis Reyes M.Sc. 215 UCB University of Colorado at Boulder gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D 8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D Harry -- Dr Harry

Re: [ccp4bb] gpp4 version 1.2 released

2009-10-02 Thread harry powell
. The most important new feature is that gpp4 now supports the CCP4 library's FORTRAN API. This means that the programs REFMAC (version 5.6.0031) and MOSFLM (version 7.0.6), Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] I compressed my images by ~ a factor of two, and they load and process in mosflm faster

2009-09-21 Thread Harry Powell
(company no. 4375679). Registered in England and Wales with its registered office at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2

Re: [ccp4bb] Summary for Anisotropic Diffraction In Refinement question

2009-09-16 Thread Harry Powell
to omit steps 2 and 3 for users who do not what their structure factors modified. My thanks to everyone who responded to my original question, and to Dale Tronrud and Michael Sawaya in particular for valuable discussion. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre

Re: [ccp4bb] attachments

2009-09-15 Thread Harry Powell
only send and receive e-mails on the basis that the Company is not liable for any such alteration or any consequences thereof. Astex Therapeutics Ltd., Registered in England at 436 Cambridge Science Park, Cambridge CB4 0QA under number 3751674 Harry -- Dr Harry Powell, MRC Laboratory

Re: [ccp4bb] Distinguishing between P6(5)22 and P6(1)22

2009-09-10 Thread harry powell
of a molecular replacement model? Cheers. Rafael. No is the short answer.. If you have heavy atom data with anomalous scattering you will get better maps in one than the other.. Eleanor Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2

Re: [ccp4bb] citation for MOSFLM

2009-09-01 Thread Harry Powell
kindly mention the same so that I can send it back to the journal which requires the same. I do appreciate your kind help with the same and apologize for this but just couldn't find the information on the web so had to resort to this. Thanks, neeraj Harry -- Dr Harry Powell, MRC

Re: [ccp4bb] citation for MOSFLM

2009-08-31 Thread harry powell
with the same and apologize for this but just couldn't find the information on the web so had to resort to this. Thanks, neeraj Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] mosflm and hkl2000

2009-07-31 Thread Harry Powell
complain and not crash. Thanks, Marius Dr.habil. Marius Schmidt Asst. Professor University of Wisconsin-Milwaukee Department of Physics Room 454 1900 E. Kenwood Blvd. Milwaukee, WI 53211 phone: +1-414-229-4338 email: m-schm...@uwm.edu http://users.physik.tu-muenchen.de/marius/ Harry -- Dr Harry

Re: [ccp4bb] mosflm and hkl2000

2009-07-31 Thread Harry Powell
. On 31 Jul 2009, at 10:15, Harry Powell wrote: Hi Marius We have a little internal project where we want to compare the quality of data reduced with HKL2000 and IMOSFLM (mosflm) to 1.3 A. Unfortunately, imosflm with its standard settings crashes always even at lower resolution whereas HKL2000

Re: [ccp4bb] imosflm STARTDIR

2009-03-19 Thread Harry Powell
, United Kingdom /FONT/DIV -- Scanned by iCritical. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] images

2009-03-18 Thread harry powell
associated with each set of images I suspect it would be hard to reproduce sensible results. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] images

2009-03-16 Thread Harry Powell
* * * === Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Issue on MOSFLM 7.0.4 with image collected on NOIR detector

2009-02-12 Thread harry powell
Department of Chemistry and Biochemistry UCB 215 Boulder, CO 80309 USA tel: + 1 (303) 735-6338 fax: + 1 (303) 492-6194 e-mail: quentin.vic...@colorado.edu screen.tiff Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] imosflm in ccp4 6.1.0 in linux problems

2009-01-07 Thread Harry Powell
where I can download them or what other solutions to get imosflm to run properly? Thanks a lot Paula Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] imosflm in ccp4 6.1.0 in linux problems

2009-01-07 Thread Harry Powell
is this ccp4-others.setup? I don't have it in my working 6.1.0 installation (built from source) Phil On 7 Jan 2009, at 11:50, Harry Powell wrote: Hi folks We have had a good look at this at Mosflm HQ now on Linux. The CCP4 TclTk++ distribution seems to work okay, and there's no need

Re: [ccp4bb] Mac pro

2009-01-06 Thread Harry Powell
how robust this is. -Nat Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

[ccp4bb] Mosflm cover was: CCP4 cover over the Yuletide and Study Weekend periods

2008-12-23 Thread Harry Powell
, Ballard, CC (Charles) wrote: Dear All I am afraid that there will be no cover from the CCP4 droids at Daresbury from 24 December until 2 January, with limited cover until 6 January. Here's wishing you all a Happy New Year Charles CCP4 core team Harry -- Dr Harry Powell, MRC Laboratory

[ccp4bb] information for study weekend attendees...

2008-12-23 Thread harry powell
Hi folks I found some tourist advice for visitors to Nottingham in the New Year... http://news.bbc.co.uk/1/hi/england/nottinghamshire/7798194.stm Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] iMosflm in 6.1 under OS X

2008-12-17 Thread Harry Powell
source $env(IMOSFLM) (file /sw/share/xtal/ccp4-6.1.0/ccp4i/imosflm/imosflm.tcl line 111) Regards, Andrzej Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 0QH

Re: [ccp4bb] Crystallographic computing platform recommendations?

2008-11-18 Thread harry powell
? Thanks in anticipation of your advice. Regards, Anna Gardberg Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] Question re: ice rings in diffraction data

2008-07-15 Thread harry powell
Toxicology Botterell Hall, Rooms 623 and 634 (lab) Queen's University, Kingston, ON, K7L 3N6 Phone: 613-533-2993, 613-533-6293 (lab) E-mail: [EMAIL PROTECTED] Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] program for distribution of distances

2008-06-24 Thread harry powell
, PhD Biomoleculaire Architectuur Celestijnenlaan 200 F B-3001 Heverlee (Leuven) Tel: +32(0)16327477 -- Disclaimer: http://www.kuleuven.be/cwis/email_disclaimer.htm Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road

Re: [ccp4bb] is it Ok to freeze

2008-06-19 Thread harry powell
researcher). Research Student Institute for Biophysical Chemistry Hannover Medical School Germany Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] is it Ok to freeze

2008-06-19 Thread harry powell
? Colin -Original Message- From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of harry powell Sent: 19 June 2008 10:12 To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] is it Ok to freeze Hi If you mean organic small molecules, then the opinion for the last 15 years at least

Re: [ccp4bb] is it Ok to freeze

2008-06-19 Thread harry powell
2008, at 11:05, harry powell wrote: Hi Colin yes, both of those. Plus freezing out multiple conformations so you can model them properly - bear in mind that a small molecule structure at a resolution worse than 1Å would be challenging to get past the normal criteria of referees, so you should

Re: [ccp4bb] is it Ok to freeze

2008-06-19 Thread harry powell
Student Institute for Biophysical Chemistry Hannover Medical School Germany Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] problems about installation of mosflm701

2008-03-27 Thread harry powell
CBFCFLAGS -O -DPROTOTYPE -DIFC # DPS export VERBOSE v export UTILFLAGS -O -DPROTOTYPE -DIFC -c -w export EXTRAFLAGS -I${UTIL} export STDCFLAGS exit Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

[ccp4bb] Missing fonts...

2008-03-05 Thread Harry Powell
is not including all the Courier fonts; since I don't have an FC8 machine handy, could anyone here offer advice about the best way to install these?  Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

[ccp4bb] new versions of Mosflm (7.0.3) and iMosflm (0.6.1)

2008-03-03 Thread Harry Powell
-- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] 3D Glasses - Vuzix HMD by eDimensional

2008-02-04 Thread Harry Powell
) to make sure you have enough light reflected from the horizontal monitor to be about the same as the light transmitted from the vertical one. On 4 Feb 2008, at 12:09, Harry Powell wrote: Hi Just looking at the diagrams, I don't think the glass is half-silvered - it looks like a large

Re: [ccp4bb] 3D Glasses - Vuzix HMD by eDimensional

2008-02-04 Thread Harry Powell
Nutrition Unit, Wellcome Trust/MRC Building, Hills Road, Cambridge, CB2 2XY, UK phone: +44 (0)1223 252830 fax: +44 (0)1223 252835 web: www.mrc-dunn.cam.ac.uk email: [EMAIL PROTECTED] Helping your favorite cause is as easy as instant messaging. You IM, we give. Learn more. Harry -- Dr Harry

[ccp4bb] New versions of Mosflm and iMosflm

2008-01-28 Thread Harry Powell
backwards Harry Luke -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] Calculating volume of Ligands

2008-01-16 Thread harry powell
, Rajan Pillai wrote: Hi All, Can anyone tell me any program that calculates voume of a ligand? Moreover, is there also any program that can calculate the volume of a ligand from its coordinates? Thanks, Rajan. Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre

Re: [ccp4bb] scale data with multiple MTZ files

2008-01-11 Thread harry powell
, NY 13346 tel: (315)-228-7245 ofc: (315)-228-7395 fax: (315)-228-7935 email: [EMAIL PROTECTED] Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road

Re: [ccp4bb] x ray data sets for teaching

2008-01-11 Thread harry powell
Beloit, WI 53511 FAX: 608-363-2052 Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

[ccp4bb] ccp4i integration task

2007-11-27 Thread Harry Powell
received! Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] ccp4i integration task

2007-11-27 Thread Harry Powell
Many thanks to everyone who took the time to reply! It will all be very helpful. On 27 Nov 2007, at 11:59, Harry Powell wrote: Hi folks Can you reply directly to me rather than ccp4bb? I was wondering how many people out there actually use the integration task in ccp4i? We're trying

Re: [ccp4bb] To bathe or not to bathe.

2007-11-24 Thread harry powell
Brookhaven Nat'l Lab. Phones: Upton, NY 11973631 344 3401 (Office) U.S.A. 631 344 2741 (Facsimile) = Harry -- Dr Harry Powell, MRC Laboratory

[ccp4bb]

2007-11-13 Thread harry powell
. Kenwood Blvd. Milwaukee, WI 53211 phone: +1-414-229-4338 email: [EMAIL PROTECTED] http://users.physik.tu-muenchen.de/marius/ Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] pointless (1.2.0) and enantiomorphic SG's

2007-11-09 Thread Harry Powell
Of course, you may need to re-index even if you have the right space group... Offering a selection of space groups compatible with a point group will not require reindexing. Some point groups of course permit reindexing, but one hope you have chosen a consistent set as you combine data sets

Re: [ccp4bb] ipmosflm

2007-09-02 Thread Harry Powell
when I try to run it: $./mosflm_linux_suse_SD mosflm_linux_suse_SD: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory It might not related to the program. However, please advise. Thx. Eric Harry -- Dr Harry Powell, MRC Laboratory

Re: [ccp4bb] diffraction images images/jpeg2000

2007-08-24 Thread Harry Powell
and would therefore affect the background statistics in a non-trivial way. Although the intensity measurements may not be badly affected the error estimates on them could be... Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] diffraction images images/jpeg2000

2007-08-24 Thread Harry Powell
, 2007 at 01:20:29PM +0100, Harry Powell wrote: Hi Lossy compression should be okay, provided that the errors introduced are smaller than those expected for counting statistics (assuming that the pixels are more-or-less independent) - i.e. less than the square-root of the individual pixel intensities

[ccp4bb] Mosflm v 7.0.1 Mac Intel pre-built executable.

2007-08-24 Thread Harry Powell
attempt to run it by being told that /sw/lib//gcc4/lib/libgfortran.1.dylib doesn't exist, it is probably worthwhile downloading this new executable. have a nice weekend! Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] mosflm and APS BM17

2007-08-22 Thread Harry Powell
!PIXEL 0.07934 Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] Release of Mosflm version 7.0.1 iMosflm 0.5.3

2007-08-20 Thread Harry Powell
-lmb.cam.ac.uk/harry/imosflm/downloads/imosflm.tcl NOTE that this is _not_ the file of the same name in the src folder. I've fixed this in the imosflm.zip file so any further downloads will not display this bug. Sorry about this! Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology

[ccp4bb] number of MTZ files input to scaleit

2007-06-26 Thread Harry Powell
okay with 20) but CAD will only let me put 9 datasets in an MTZ file. Do I have to run CAD twice (or more...) to get all my datasets together? Or is there some other way that I've missed? Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] anomalous signal

2007-06-01 Thread Harry Powell
Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH

Re: [ccp4bb] CCP4 GUI

2007-05-11 Thread Harry Powell
is assumed to know better. If an interface (e.g. ccp4i) sets the value to a default, the program really has no way of knowing that it was the interface and not a user who knows their data which has input the value. Just my two ha'porth... Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology

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