Fitmunk works pretty well in the initial stages of model fitting. You will
still need to manually check the results of any automated model fitting program
to see if it makes sense; your brain is still your best tool, in the final
analysis.
Diana
> On Sep 4, 2017, at 1:29 PM, Dominika Borek
Hello Rohit,
did you inspect the structure and map in Coot ; are the outliers really
outliers, are other orientations possible?
In Coot there are several options, e.g.
- under Extensions -> all molecule-> Fit protein, step refine or
optimize Ramachandran
- using the icons on the right side of
You may try Fitmunk for side chains:
http://kniahini.med.virginia.edu/fitmunk/server/
D.
On 2017-09-04 09:36 AM, rohit kumar wrote:
Dear All,
Could anyone help me, how I can fix my sidechain outliers or
clashscore in coot or in CCP4 tools.
Or by using any online severs.
Its urgent
Thank
Dear All,
Could anyone help me, how I can fix my sidechain outliers or clashscore in
coot or in CCP4 tools.
Or by using any online severs.
Its urgent
Thank You in advance
--
WITH REGARDS
Dr. Rohit Kumar Singh
School of Life Sciences,
Jawaharlal Nehru University
New Delhi -110067
