Bug#683226: mpich2: Segfaults if ssh is not available

2012-07-29 Thread Pavan Balaji
-sbuild)root@hartree:/home/mba/build# mpirun /bin/true Segmentation fault The patch is attached. Cheers, Michael -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Bug#660259: mpich2: FTBFS: [sparc] missing files

2012-05-07 Thread Pavan Balaji
On 05/06/2012 08:28 PM, Samuel Thibault wrote: Pavan Balaji, le Sun 06 May 2012 12:14:27 -0500, a écrit : MPICH2 currently does not support native atomic primitives for gcc/sparc. It needs to be built with the emulated atomics, Mmm, really? I just verified it with our OpenPA developer. We

Bug#660259: mpich2: FTBFS: [sparc] missing files

2012-05-07 Thread Pavan Balaji
which doesn't use shared memory at all. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#660259: mpich2: FTBFS: [sparc] missing files

2012-05-06 Thread Pavan Balaji
primitives for gcc/sparc. It needs to be built with the emulated atomics, which means that the application needs to be linked with libopa as well. In general, it is good to use pkg-config to see what all libraries are required and link with all of them. -- Pavan Balaji http://www.mcs.anl.gov

Bug#666140: mpich2: FTBFS: dh_install: libmpich2-3 missing files (usr/lib/libmpich.so.3*), aborting

2012-03-30 Thread Pavan Balaji
this bug to MPICH2 upstream, with the complete configure log and other information requested in the README file? https://trac.mcs.anl.gov/projects/mpich2/newticket -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org

Bug#666071: mpich2: In this version of mpich2, the mpd daemon (and other utilities) are missing.

2012-03-28 Thread Pavan Balaji
-help should give you the usage instructions. Or you can find them here. http://wiki.mcs.anl.gov/mpich2/index.php/Using_the_Hydra_Process_Manager -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2012-01-13 Thread Pavan Balaji
-- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2012-01-12 Thread Pavan Balaji
should not be required in 1.5.x. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2012-01-12 Thread Pavan Balaji
On 01/12/2012 10:27 AM, Pavan Balaji wrote: For the inter-library dependencies, I'd not like to have a Debian-only patch. But you are right, libtool should be able to disable dependencies on platforms it doesn't support. Let me look into this some more. Hmm.. In 1.5.x, it looks like we

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2012-01-11 Thread Pavan Balaji
binutils. Feel free to ignore this, but at some point this will become a release-critical bug. -Adam On Thu, 2011-12-29 at 23:44 -0600, Pavan Balaji wrote: The best method is to use pkg-config to find what libraries need to be linked in. Currently, this list is libmpich, libmpl and libopa

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2012-01-11 Thread Pavan Balaji
/Inter_002dlibrary-dependencies.html Note that this is not portable, so there'll need to be a configure option to enable it for platforms that libtool supports it on. Or did you mean something else? Thanks, -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email

Bug#653616: libmpich2-dev: Missing library linkage for libmpich.so on MIPS(el) and S390

2011-12-29 Thread Pavan Balaji
, that it either ignores or manages to find libmpl... But in general, it's best to link to all of the libraries whose symbols you use, I'm pretty sure it's also a requirement of binutils-gold. Thanks, Adam -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#651041: OpenPA atomic primitives

2011-12-26 Thread Pavan Balaji
to ch3:sock (using the configure option --with-device=ch3:sock), which doesn't use shared memory at all and hence doesn't need OPA atomics. 3. You can contribute m68k processor atomics to OPA, so it is natively supported and OPA doesn't have to fall back to locks. -- Pavan -- Pavan Balaji

Bug#576712: libmpich2-dev: Lots of compile warnings

2011-01-07 Thread Pavan Balaji
on the compiler (g++, I assume; which version), and the exact configure flags used? https://trac.mcs.anl.gov/projects/mpich2/newticket -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe

Bug#555714: mpich2: Please add support for blcr

2010-11-11 Thread Pavan Balaji
On 10/24/2010 11:55 AM, Pavan Balaji wrote: On 10/24/2010 11:42 AM, Lucas Nussbaum wrote: On 23/10/10 at 12:51 -0500, Pavan Balaji wrote: On 10/23/2010 12:40 PM, Lucas Nussbaum wrote: On 11/11/09 at 10:15 -0600, Pavan Balaji wrote: We had a short discussion on this within the MPICH group

Bug#555714: mpich2: Please add support for blcr

2010-10-24 Thread Pavan Balaji
On 10/24/2010 11:42 AM, Lucas Nussbaum wrote: On 23/10/10 at 12:51 -0500, Pavan Balaji wrote: On 10/23/2010 12:40 PM, Lucas Nussbaum wrote: On 11/11/09 at 10:15 -0600, Pavan Balaji wrote: We had a short discussion on this within the MPICH group. We believe that we will be able to modify

Bug#555714: mpich2: Please add support for blcr

2010-10-23 Thread Pavan Balaji
On 10/23/2010 12:40 PM, Lucas Nussbaum wrote: On 11/11/09 at 10:15 -0600, Pavan Balaji wrote: We had a short discussion on this within the MPICH group. We believe that we will be able to modify the code such that enabling it at configure time should not add any additional performance overhead

Bug#577638: mpich2: conflict over the mpd binary

2010-04-13 Thread Pavan Balaji
for people who want to configure with mpd using --with-pm=mpd). The timeline for releasing 1.3 is late summer unfortunately (1.3a1 is already out). -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject

Bug#573187: transition: mpi-defaults

2010-04-09 Thread Pavan Balaji
Manuel Prinz wrote: Am Donnerstag, den 08.04.2010, 18:22 -0500 schrieb Pavan Balaji: We were having a discussion about a common ABI in the context of MPI-3. But that working group fizzled out. I'll check on what exactly happened with it in the next meeting (in May). Even if the MPI standard

Bug#573187: transition: mpi-defaults

2010-04-08 Thread Pavan Balaji
ABI compatibility, I'll talk to the Open MPI folks to see if MPICH2 and Open MPI do whatever the ABI working group was proposing outside of the standard, which might be sufficient for you guys. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs

Bug#573187: transition: mpi-defaults

2010-04-07 Thread Pavan Balaji
Lucas Nussbaum wrote: On 06/04/10 at 21:01 -0500, Pavan Balaji wrote: By default, mpi.h should installed in $prefix/include, which seems to be what you need (prefix = /usr/lib/mpich2). So, unless you give an --includedir option to configure, this should work the way you expect it to. Maybe I'm

Bug#573187: transition: mpi-defaults

2010-04-06 Thread Pavan Balaji
-- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#573187: transition: mpi-defaults

2010-04-06 Thread Pavan Balaji
, this should work the way you expect it to. Maybe I'm not understanding the problem correctly here? -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Bug#558960: libmpich2-dev: mpicc.mpich2 unconditionally sets RPATH in compiled binaries

2010-02-24 Thread Pavan Balaji
are using? -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#558960: libmpich2-dev: mpicc.mpich2 unconditionally sets RPATH in compiled binaries

2010-02-24 Thread Pavan Balaji
On 02/24/2010 08:01 AM, Pavan Balaji wrote: Hi Lucas, On 02/24/2010 05:10 AM, Lucas Nussbaum wrote: % mpicc.mpich2 -show cc -g -O2 -g -Wall -O2 -I/usr/include/mpich2 -L/usr/lib -L/usr/lib -Wl,-rpath,/usr/lib -lmpich -lopa -lpthread -lrt

Bug#552429: [Pkg-openmpi-maintainers] Bug#552429: MPI: fix alternatives mess with runtime environment

2009-11-11 Thread Pavan Balaji
implementation. For example, Open MPI uses our MPI I/O library, so they have the same problem too. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas

Bug#555714: mpich2: Please add support for blcr

2009-11-11 Thread Pavan Balaji
to a compile-time option. This will still hurt performance a little, but might be a lot more manageable. Let me check with the developer who is adding this support and see what he thinks. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ

Bug#555714: mpich2: Please add support for blcr

2009-11-11 Thread Pavan Balaji
We had a short discussion on this within the MPICH group. We believe that we will be able to modify the code such that enabling it at configure time should not add any additional performance overhead for applications that don't need this support. So starting mpich2-1.3, you should be

Bug#551752: mpich2-doc: conflict with lam4-dev

2009-10-20 Thread Pavan Balaji
implementations including MPICH2, LAM, OpenMPI, MVAPICH, what-have-you. -- Pavan -- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#420638: [Pkg-scicomp-devel] MPICH2 in Debian

2009-06-17 Thread Pavan Balaji
-- Pavan Balaji http://www.mcs.anl.gov/~balaji -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org

Bug#420638: [Pkg-scicomp-devel] MPICH2 in Debian

2009-06-16 Thread Pavan Balaji
, Lucas Nussbaum wrote: On 15/06/09 at 16:32 -0500, Pavan Balaji wrote: Hello, I'm one of the developers of MPICH at Argonne National Laboratory. As some of you might be aware, our current focus is mainly on the second generation of MPICH, i.e., MPICH2. I noticed that currently Debian only