; urgency=medium
+
+ * Non-maintainer upload.
+ * Solving FTBFS against jgit/6.7.0 (Closes: #1071082)
+ * Allowing source package to be built twice in a row (Closes: #1048703)
+
+ -- Pierre Gruet Wed, 22 May 2024 21:50:25 +0200
+
plm (2.9.2-1) unstable; urgency=medium
* New upstream release
Source: plm
Version: 2.9.2-1
Followup-For: Bug #1048703
Control: tags -1 patch
Dear Maintainer,
The enclosed patch will allow you to solve this bug.
Cheers,
--
Pierre
diff -Nru plm-2.9.2/debian/rules plm-2.9.2/debian/rules
--- plm-2.9.2/debian/rules 2020-10-11 21:54:58.0 +0200
is now removed.
+Author: Pierre Gruet
+Forwarded: no
+Last-Update: 2024-05-03
+
+--- a/src/plm/core/model/tracking/GitUtils.java
b/src/plm/core/model/tracking/GitUtils.java
+@@ -126,7 +126,7 @@
+
+ public void mergeRemoteIntoLocalBranch(String userBranchHash) throws
Exc
Package: wnpp
Severity: wishlist
Owner: Debian-Java team
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-j...@lists.debian.org
* Package name: libeddsa-java
Version : 0.3.0
Upstream Contact: str4d
* URL : https://github.com/str4d/ed25519-java
* License :
Package: liblapackpp-dev
Version: 2023.11.05-1
Severity: normal
Dear Maintainer,
liblapackpp-dev lacks a dependency on libblaspp-dev.
The latter is needed as
/usr/lib//cmake/lapackpp/lapackConfig.cmake
has a ``find_dependency(blaspp)'' command.
Cheers,
--
Pierre
-- System Information:
Source: openturns
Version: 1.21.1-4
Severity: serious
Tags: ftbfs fixed-in-experimental pending
Hi,
Since latest swig upstream version was uploaded to unstable, openturns FTBFS on
all architectures. This can be fixed by applying
Package: libgrpc-java
Version: 1.41.3+ds-2
Severity: normal
Dear Maintainer,
libgrpc-java should (at least) depend on libanimal-sniffer-java and
libperfmark-java, as its pom files declare a dependency on their artifacts.
Perhaps a general review of the dependencies would be useful.
Best,
--
Source: guava-libraries
Version: 32.0.1-1
Severity: important
Dear Maintainer,
When one tries to use the com.google.guava:guava-testlib:debian artifact in a
Maven pom.xml file, during the build one gets the error
[ERROR] Failed to execute goal on project myProject: Could not resolve
Hello,
Le 04/02/2024 à 03:59, Otto Kekäläinen a écrit :
Thanks for maintaining this package in Debian, it is very useful!
Could you please update it to latest version 7.2 so both Trixie and
also Ubuntu 24.04 will ship with a fresh version?
Thanks
I will be having a look shortly!
Best,
--
Source: persalys
Version: 15.0+ds-3
Severity: important
Tags: ftbfs
Hi,
persalys FTBFS against openturns/1.22-1 which is in experimental, waiting for a
transition. I am almost sure updating persalys to newest upstream version will
solve this. I will care for it soon.
--
Pierre
Control: tags -1 fixed-in-experimental
Control: fixed -1 1.22-1
Hi,
The issue is fixed in version 1.22-1 in experimental. It will have to
wait there a little bit as there are a lot of transitions of
dependencies going on due to the 64 bit time_t transition.
Best,
--
Pierre
Control: tags -1 confirmed
Hi,
On Sat, 27 Jan 2024 09:36:09 +0200 Graham Inggs wrote:
> Source: openturns
> Version: 1.21.1-4
> Severity: important
> Tags: ftbfs patch
> User: debian-pyt...@lists.debian.org
> Usertags: python3.12
>
> Hi Maintainer
>
> openturns FTBFS with Python 3.12 as the
Dear Release Team,
I think this bug can be closed now, as the transition has been done.
I am not doing it myself in case I might have missed something...
Best,
--
Pierre
OpenPGP_signature.asc
Description: OpenPGP digital signature
Hi,
Le 28/12/2023 à 20:47, Jonathan McDowell a écrit :
On Thu, Dec 28, 2023 at 02:07:25PM +0100, Pierre Gruet wrote:
I feel some contributors are missing from the page [0]. For instance, I (Pierre
Gruet ) have never been on it although I have contributed on a regular
basis since 2020.
I have
Package: nm.debian.org
Severity: normal
X-Debbugs-Cc: raf...@debian.org
Hi,
I feel some contributors are missing from the page [0]. For instance, I (Pierre
Gruet ) have never been on it although I have contributed on a regular
basis since 2020.
I have no idea of the number of missing people.
I
.igv.feature
and interface htsjdk.tribble.NamedFeature in htsjdk.tribble match
There is some ambiguity to be removed, which is solved by the enclosed patch.
Best,
--
Pierre
Description: solving an ambiguity in the tests due to a new class in
htsjdk/4.0.2+dfsg
Author: Pierre Gruet
Forwarded: no
Control: tags -1 confirmed
Hello Vladimir,
On Thu, 23 Nov 2023 11:32:20 +1300 Vladimir Petko
wrote:
> Dear Maintainers,
>
> Would it be possible to consider a merge request[1] that addresses this
> issue?
I am grateful you submitted this merge request, I will look at it shortly!
>
> Best
Control: severity -1 wishlist
Control: tags -1 wontfix
Hi,
I am afraid I am missing the point here: it does not hurt anyone if the
metapackages are not installable because their dependencies are not.
Additionally scilab-test is huge and it makes no sense to make it
Architecture: any and
Hi again,
Just for the sake of clarity: below I suggested a path to removal but I
want to make it clear I don't intend to undertake such action,
disrespecting the maintainer. Debian processes have to be respected.
Best,
--
Pierre
Le 10/11/2023 à 10:05, Pierre Gruet a écrit :
Hi Salvatore
Hi Salvatore,
I am doing some QA overseeeing, I am not the maintainer of i2p. I NMUed
it one year and a half ago, nothing has happened since then.
On Sun, 06 Aug 2023 21:26:51 +0200 Salvatore Bonaccorso
wrote:
> Source: i2p
> Version: 0.9.48-1.1
> Tags: security upstream
> Justification:
Control: severity -1 important
Hi,
Thanks Andrius for the advice given here.
On Wed, 8 Nov 2023 09:44:58 +0200 Andrius Merkys wrote:
> Hello,
>
> On Thu, 02 Nov 2023 18:10:19 +0100 Pierre Gruet wrote:
> > Recently catch2/3.4.0-1 was uploaded to Debian, great. Yet the
binary
Source: catch2
Version: 3.4.0-1
Severity: serious
Dear Maintainer,
Recently catch2/3.4.0-1 was uploaded to Debian, great. Yet the binary packages
do not follow the layout for libraries that is described in Policy Section 8.
For instance I think we should provide a shared library and if there are
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: opentu...@packages.debian.org
Control: affects -1 + src:openturns
Dear Release Team,
I would like to request a transition slot for openturns. It has been accepted
to
Source: colmap
Version: 3.8-1
Followup-For: Bug #1054556
Control: severity -1 serious
Hi,
ceres-solver/2.2.0+dfsg-3 has reached unstable, thus I am raising the severity
of this bug to RC.
Best,
--
Pierre
Source: openturns
Followup-For: Bug #1054555
Control: tags -1 fixed-in-experimental
Hello,
Now the version 1.21.1-2 of the package, currently in experimental, builds
successfully against ceres-solver/2.2.0+dfsg-2.
Cheers,
--
Pierre
Source: persalys
Version: 13.1.1+ds-1
Severity: important
Dear Maintainer (whom I am),
openturns will soon undergo a library transition and currently persalys FTBFS
against the version of openturns in experimental. Upgrading persalys to its new
upstream version solves the issue.
Best,
--
Control: tags -1 pending
Hi Emmanuel,
Le 29/09/2023 à 02:04, Emmanuel Bourg a écrit :
On Wed, 27 Sep 2023 11:03:16 +1300 Vladimir Petko
wrote:
classes:
[mkdir] Created dir: /<>/build/classes
[javac] Compiling 1117 source files to /<>/build/classes
[javac] warning: [options]
Package: ftp.debian.org
Severity: normal
User: ftp.debian@packages.debian.org
Usertags: remove
X-Debbugs-Cc: biojava5-l...@packages.debian.org
Control: affects -1 + src:biojava5-live
Hello,
On behalf of Debian-med team, I am asking you to please remove biojava5-live
from unstable.
Package: wnpp
Severity: wishlist
Owner: Debian Java Maintainers
X-Debbugs-Cc: debian-de...@lists.debian.org
* Package name: libfailsafe-java
Version : 3.3.2
Upstream Contact: Jonathan Halterman
* URL : Jonathan Halterman
* License : Apache-2.0
Programming
+deb11u2) bullseye; urgency=medium
+
+ * Team upload.
+ * Fixing CVE-2022-44729 and CVE-2022-44730
+
+ -- Pierre Gruet Fri, 25 Aug 2023 11:07:07 +0200
+
batik (1.12-4+deb11u1) bullseye-security; urgency=high
* Team upload.
diff -Nru batik-1.12/debian/patches/CVE-2022-447xx.patch
batik-1.12
+1,9 @@
+batik (1.16+dfsg-1+deb12u1) bookworm; urgency=medium
+
+ * Fixing CVE-2022-44729 and CVE-2022-44730
+
+ -- Pierre Gruet Thu, 24 Aug 2023 21:28:00 +0200
+
batik (1.16+dfsg-1) unstable; urgency=medium
* New upstream version 1.16+dfsg, fixing security issues:
diff -Nru batik-1.16+dfsg
Hi Andreas,
Le 24/08/2023 à 11:21, Andreas Tille a écrit :
Hi Pierre,
I just noticed that snpeff upstream has tagged a new release. I've
injected the new tarball into Salsa Git but did not yet worked on the
quilt patches that need to be adapted. If you throw an ENOTIME error
I could see how
Package: wnpp
Severity: wishlist
Owner: Debian Java Maintainers
X-Debbugs-Cc: debian-de...@lists.debian.org
* Package name: libconcurrentunit-java
Version : 0.4.6
Upstream Contact: Jonathan Halterman
* URL : https://github.com/jhalterman/concurrentunit
* License
Package: wnpp
Severity: normal
X-Debbugs-Cc: dice...@packages.debian.org
Control: affects -1 + src:dicelab
I intend to orphan the dicelab package because of a lack of interest and
apparently a poor number of users. Upstream seems to be inactive as the orig
website has been unreachable for many
Control: tags -1 pending confirmed
Hi,
On Sun, 30 Jul 2023 20:27:51 +0200 Lucas Nussbaum wrote:
> Source: ceres-solver
> Version: 2.1.0+really2.1.0+dfsg-1
> Severity: important
> Tags: ftbfs
> User: python-modules-t...@lists.alioth.debian.org
> Usertags: sphinx7.1
>
> Hi,
>
> ceres-solver
On Tue, 1 Aug 2023 23:21:52 +0200 Samuel Thibault
wrote:
> Package: coinor-libcbc3.1
> Version: 2.10.10+really2.10.10+ds1-2
> Severity: serious
> Justification: Fails to install
>
> Hello,
>
> While upgrading testing today:
>
> Preparing to unpack
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: coinor-...@packages.debian.org
Control: affects -1 + src:coinor-cbc
Dear Release Team,
I would like to ask for a transition slot for coinor-cbc. The package has
undergone
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: pa...@packages.debian.org
Control: affects -1 + src:pagmo
Dear Release Team,
I would like to ask for a transition slot for pagmo. libpagmo9 has been
accepted in
Hello Julien,
I am writing to you in addition to the sole bug report as you are the
uploader of coinor-cbc.
Because we saw an ABI breakage between versions 2.10.8 and 2.10.10 which
affects rdeps, I propose to:
- Revert the version in unstable to 2.10.8, with upstream version number
being
Control: severity -1 serious
Control: retitle -1 Package has to go through a proper transition process
Hi,
After the discussions in
https://lists.debian.org/debian-mentors/2023/07/msg00057.html
it appears the package should have undergone a transition process
and a SONAME bump between
Source: coinor-cbc
Version: 2.10.10+ds1-1
Severity: important
X-Debbugs-Cc: schuel...@phimeca.com
Dear Maintainer,
Starting from version 2.10.10+ds1-1 (2.10.8+ds1-1 was OK), one of the
build-time tests of openturns started to fail: t_Bonmin_std. Running it with
gdb I get:
Control: affects -1 src:libjogl2-java src:beast2-mcmc
Control: severity -1 serious
Hi,
I am restoring the severity of this FTBFS bug, which has concrete
consequences on several packages.
Cheers,
--
Pierre
OpenPGP_signature
Description: OpenPGP digital signature
Hello again,
Le 29/06/2023 à 21:22, László Böszörményi (GCS) a écrit :
On Thu, Jun 29, 2023 at 9:15 PM Pierre Gruet wrote:
Le 29/06/2023 à 18:41, László Böszörményi (GCS) a écrit :
Do you have your proposed package somewhere? I would also like to
check it with the updated protobuf package
Hi Laszlo,
Thanks for looking at my proposal, I am glad you consider it fit!
Le 29/06/2023 à 18:41, László Böszörményi (GCS) a écrit :
Hi Pierre,
On Wed, Jun 28, 2023 at 4:39 PM Pierre Gruet wrote:
- removing j2objc from the pom.xml so that rdeps don't look for this
Debian-unpackaged
Control: retitle -1 please rewrite the Java packaging to build rdeps
Control: affects -1 src:genomicsdb
Hello,
This is a summary email for this bug thread as I tested locally some
changes to the packaging, so that rdeps relying on the
/usr/share/java/protobuf-util.jar can build and run.
Hello again,
Sorry, it seems I sent the bug report too early. There should be another
change in java/util.pom.xml : the junit artifact misses the "test"
scope. Precisely, we should change the junit stanza to
junit
junit
test
Else, junit would be needed during the build of
Package: libprotobuf-java
Version: 3.21.12-3
Severity: important
Tags: patch
Dear Maintainer,
I am in the progress of updating one of my packages, genomicsdb. While doing
so, I stumbled upon an issue in the file
Hi Salvatore,
Le 15/06/2023 à 07:21, Salvatore Bonaccorso a écrit :
Hi Pierre,
On Wed, Jun 14, 2023 at 12:01:18AM +0200, Pierre Gruet wrote:
[...]
diff -Nru xerial-sqlite-jdbc-3.40.1.0+dfsg/debian/changelog
xerial-sqlite-jdbc-3.40.1.0+dfsg/debian/changelog
--- xerial-sqlite-jdbc-3.40.1.0
-2023-32697 in Bookworm)
+
+ -- Pierre Gruet Tue, 13 Jun 2023 23:19:59 +0200
+
xerial-sqlite-jdbc (3.40.1.0+dfsg-1) unstable; urgency=medium
* New upstream version 3.40.1.0+dfsg
diff -Nru xerial-sqlite-jdbc-3.40.1.0+dfsg/debian/patches/CVE-2023-32697.patch
xerial-sqlite-jdbc-3.40.1.0+dfsg
Control: block -1 by 1037212
Hello,
Le 07/06/2023 à 20:34, Dima Kogan a écrit :
Hi. I'll gladly accept help on this. If you can do this yourself, that
would be great!
Thanks
Thanks for your quick answer; fine then, I will do so :)
I could build it in a Bullseye chroot by having also
Source: picojson
Severity: wishlist
Dear Maintainer,
I would be interested in having picojson backported to Bullseye, for myself but
also for people working with me.
If you want, I would be pleased to do it for you (I am a DD).
Best,
--
Pierre
Source: valijson
Severity: wishlist
Dear Maintainer,
I would be interested in having a backport of valijson in Bullseye, not only
for me but also for other users I know.
I would happily do it myself if you wish (I am a DD).
Best wishes,
--
Pierre
Control: forwarded -1 https://gitlab.com/scilab/scilab/-/issues/13151
Control: tags -1 - moreinfo
Hi Sébastien,
Le 28/05/2023 à 17:46, Sébastien Villemot a écrit :
Hi Pierre,
[...]
The Debian package src:slicot contains a pre-release of version 5.0 of
Slicot, which was the last version
Package: libboost1.81-all-dev
Version: 1.81.0-5
Severity: normal
Dear Maintainer,
The version of libboost1.81-all-dev currently in unstable and testing does not
depend on one of the -dev packages, namely libboost-json1.81-dev, although it
should.
Best regards,
--
Pierre
Control: affects -1 - src:scilab
Hi Julien,
On Thu, 30 Apr 2020 09:41:03 +0200 Julien Puydt
wrote:
> Hi,
>
> can I know how it affects scilab?
It does not affect scilab, at least not anymore! This can be seen in the
version of scilab currently in experimental: 6.1.1+dfsg2-7~exp0.
The
Package: libjeuclid-core-java
Version: 3.1.9-5
Severity: normal
Dear Maintainer,
While running scilab, I met an issue with MathML labels for axes, that were not
showing up. After digging into this, I saw this was a bug in
libjeuclid-core-java and I built the following minimal non-working
:13.0 +0100
+++ jmol-14.32.83+dfsg/debian/changelog 2023-05-04 14:24:33.0 +0200
@@ -1,3 +1,10 @@
+jmol (14.32.83+dfsg-2) unstable; urgency=medium
+
+ * Removing symlink to non-existing /usr/share/java/JSpecView.jar
+(Closes: #1035484)
+
+ -- Pierre Gruet Thu, 04 May 2023 14:24:33
Control: tags -1 - moreinfo
Hi Paul,
Le 27/04/2023 à 11:38, Paul Gevers a écrit :
Control: tags -1 moreinfo
Hi Pierre,
On Sun, 23 Apr 2023 17:27:30 +0200 Pierre Gruet wrote:
This unblock would lead to new upstream versions (with some packaging
work more
complex than just refreshing patches
Source: gluegen2
Version: 2.3.2-9
Severity: serious
Tags: fixed-in-experimental
Dear Maintainer,
Non-free header files are present in the source of gluegen2, see for instance
in make/stub_includes/jni/jni.h:
* Copyright 2006 Sun Microsystems, Inc. All rights reserved.
* SUN
Package: nm.debian.org
Severity: normal
Hello,
When an application manager puts an application on hold, the number of
processes on hold on
https://nm.debian.org/public/managers/
increases by one unit for this AM, fine.
Now, if this process is closed, I trust the "on hold" counter for the AM
Control: reassign -1 libjogl2-java
Control: merge 1006532 -1
Hello,
This is a bug in libjogl2-java, which is fixed in
libjogl2-java/2.4.0+dfsg-1~exp1 currently in experimental.
Cheers,
--
Pierre
OpenPGP_signature
Description: OpenPGP digital signature
Control: tags -1 fixed-in-experimental
Control: fixed -1 2.4.0+dfsg-1~exp1
Hello,
This bug should not show up anymore with the version 2.4.0+dfsg-1~exp1
currently in experimental. As we are in the freeze process for Bookworm,
one should wait the release happens as scilab also needs to be
Control: affects -1 + scilab
Hi,
Such error message also shows up in the debug logs when one tries to
plot something using scilab.
I did a quick-and-dirty try and I think version 2.4.0 of jogl2 fixes
this. Anyway, I will tweak it in experimental shortly to figure it out.
Best,
--
Pierre
upstream metadata fields: Repository-Browse.
+ * Fix day-of-week for changelog entry 5.0.3-1.
+
+ -- Pierre Gruet Sat, 11 Mar 2023 16:23:07 +0100
+
scilab (6.1.1+dfsg2-4) unstable; urgency=medium
* Add patch to disambiguate pause (Closes: #1017283).
@@ -1348,7 +1370,7 @@
* Package moved
Hi tony,
On Sun, 12 Feb 2023 10:15:35 -0800 tony mancill wrote:
>
> Okay, first the good news. There are upstream tags for 2.4.0. I have
> started working on adapting the sequence of debian/patches against the
> new release.
>
> But in addition to not yet being done with that, it didn't seem
Hi min sun,
Le 20/02/2023 à 04:23, min sun a écrit :
Hi, Pierre Gruet:
Thanks for your kind advice.
And thanks for your work on this package!
I have just uploaded as is to experimental. I will try to remember
uploading it to unstable after the release of Bookworm, but please drop
Hello min sun,
Le 13/02/2023 à 10:27, min sun a écrit :
Hi, Hilmar Preuße, and tony:
Thanks for you guide!
I will keep the distribution tag "UNRELEASED" as it is for the sponsor.
which I also support. Some teams have put such practice in their
policies, like in
Control: reassign -1 biojava6-live
Hello,
This is a bug in biojava6-live which makes its biojava-structure
artifact require unneeded log4j jars.
Best,
--
Pierre
OpenPGP_signature
Description: OpenPGP digital signature
Control: reassign -1 biojava6-live
Hello,
This is a bug in biojava6-live which makes its biojava-structure
artifact require unneeded log4j jars.
Best,
--
Pierre
OpenPGP_signature
Description: OpenPGP digital signature
Control: tags -1 moreinfo
Hi,
On Thu, 19 Jan 2023 07:44:05 + min sun wrote:
>
> Package: sponsorship-requests
> Severity: normal
>
> Dear mentors,
>
> I am looking for a sponsor for my package "libcommons-validator-java":
>
> * Package name : libcommons-validator-java
> Version : 1:1.7-1
>
Package: wnpp
Severity: wishlist
Owner: Pierre Gruet
User: debian-scie...@lists.debian.org
Usertags: field..geography
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-scie...@lists.debian.org
* Package name: glgrib
Version : 1.0.0
Upstream Contact: Philippe Marguinaud
* URL
Hi again tony,
Le 22/12/2022 à 16:16, tony mancill a écrit :
Hi Pierre,
On Thu, Dec 22, 2022 at 07:31:30AM +0100, Pierre Gruet wrote:
Hi tony,
Le 21/12/2022 à 22:58, tony mancill a écrit :
On Tue, Dec 20, 2022 at 11:45:54PM +0100, Pierre Gruet wrote:
Control: retitle -1 Please make
Hi tony,
Le 21/12/2022 à 22:58, tony mancill a écrit :
On Tue, Dec 20, 2022 at 11:45:54PM +0100, Pierre Gruet wrote:
Control: retitle -1 Please make liblog4j2-java depend on junit5
Hello,
In version 2.19.0-1 of liblog4j2-java, the file
/usr/share/maven-repo/org/apache/logging/log4j
Control: retitle -1 Please make liblog4j2-java depend on junit5
Hello,
In version 2.19.0-1 of liblog4j2-java, the file
/usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom
declares the junit-bom artifact as a dependency. It is shipped in junit5.
If this
Control: tags -1 help
Hello,
I tried to investigate further, I feel a window should appear and the
action of the user is expected, yet I don't see anything except the
initial "Initializing BEAUti..." GUI.
My knowledge of jdb did not allow me to understand further what is going on.
Cheers,
Control: reassign -1 libhmsbeagle 3.1.2+dfsg-12
Control: affects -1 beast-mcmc beast2-mcmc
Control: tags -1 pending
Hi,
Thanks to Remco Bouckaert, the author of beast2, I could find the issue
is in libhmsbeagle. Passing --without-opencl to the configure step of
libhmsbeagle allows one to
Control: forcemerge 1025838 -1
Hello,
This is the same as #1025838, which version 1.11.9+dfsg-3 properly closes.
Best,
--
Pierre
OpenPGP_signature
Description: OpenPGP digital signature
Control: forwarded -1 https://github.com/CompEvol/beast2/issues/1069
Hi,
Le 12/12/2022 à 17:08, Andreas Tille a écrit :
Hi Andrius,
Am Mon, Dec 12, 2022 at 04:06:40PM +0200 schrieb Andrius Merkys:
When launched on a system without OpenCL, beast-mcmc executable dies:
$ beast-mcmc -help
Source: python3-nibabel
Version: 4.0.2-1
Severity: serious
Hi,
It seems the module nibabel.trackvis is not shipped anymore with nibabel 4.0.2,
which breaks the autopkgtest of nipype. See for instance
https://ci.debian.net/packages/n/nipype/testing/amd64/
Cheers,
--
Pierre
Package: beast2-mcmc
Version: 2.7.2+dfsg-1
Severity: important
Hi,
When launching
$ beauti2
I get the exception message discussed in bug #1025829, then a window from the
beast package manager, then the program terminates.
In the console I have
Graphics Device initialization failed for : es2,
Package: beast2-mcmc
Version: 2.7.2+dfsg-1
Severity: normal
Hi,
When launching
$ beast2-mcmc
I get an exception message
java.lang.NullPointerException: Cannot invoke "java.io.InputStream.close()"
because "" is null
at beast.pkgmgmt.launcher.BeastLauncher.copyFileUsingStream(Unknown
Control: retitle -1 ITP: coinor-bonmin -- mixed-integer nonlinear optimization
solver
Control: owner -1 !
Hi,
I am willing to package bonmin as it is a (optional) dependency of openturns,
which I maintain.
Cheers,
--
Pierre
OpenPGP_signature
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, persalys, which also builds well.
The autogenerated ben file is fine.
So I am ready to proceed when you tell me.
Cheers,
--
Pierre Gruet
Package: lintian
Version: 2.115.3
Severity: normal
Dear Maintainer,
Recently, java-common was updated in unstable and then in testing, it changes
the default JDK in Debian from OpenJDK11 to OpenJDK17. Thus I think the line 21
in data/java/constants should be changed from
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
Dear Release team,
There is a need for a transition of hmat-oss after a change in the ABI. The new
package has been uploaded to experimental and can build on all architectures,
either
Source: ciftools-java
Version: 4.0.3-1
Control: tags -1 pending
After discussing with upstream on the issue the present bug was reported to, it
appears the issue is innocuous and I am going to upload the package with the
fix they suggested.
Cheers,
--
Pierre
Source: ciftools-java
Version: 4.0.3-1
Followup-For: Bug #1012093
X-Debbugs-Cc: mer...@debian.org
Control: forwarded -1 https://github.com/rcsb/ciftools-java/issues/12
Hello,
I investigated the test failure a bit and saw tiny differences between a
generated gzip file and a reference one. This
Package: libreflectasm-java
Version: 1.11.9+dfsg-1
Control: forwarded -1 https://github.com/EsotericSoftware/reflectasm/issues/89
Hello,
I tried to dig a bit and found some changes in class loaders in the tests, I
tried to summarize my findings in the Github issue I created [0].
Best,
--
Package: gradle
Version: 4.4.1-16
Severity: minor
Hello,
/usr/bin/gradle invokes a gradle build with, among others,
--illegal-access=permit
Support for --illegal-access has been removed in OpenJDK17.
There is a warning message about it in the build logs of Debian packages every
time gradle
Hi Andreas,
Le 26/10/2022 à 11:24, Andreas Tille a écrit :
Hi Pierre,
Am Wed, Oct 26, 2022 at 10:41:51AM +0200 schrieb Pierre Gruet:
[1] https://salsa.debian.org/med-team/gdcm/-/jobs/3427720
This is really just a missing include dir, as the problematic header is in
/usr/lib/jvm/default-java
Hi,
Le 26/10/2022 à 10:35, Andreas Tille a écrit :
Hi Mathieu,
Am Wed, Oct 26, 2022 at 08:10:42AM +0200 schrieb Mathieu Malaterre:
On Wed, Oct 26, 2022 at 7:53 AM Andreas Tille wrote:
Hi,
in the bug log there is some discussion to drop C# and Java VTK
bindings. This would mean to drop
Package: wnpp
Severity: wishlist
Owner: Debian-med team
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-...@lists.debian.org
* Package name: libmjson-java
Version : 1.4.0
Upstream Author : Miami-Dade County
* URL : https://bolerio.github.io/mjson/
* License
Package: wnpp
Severity: wishlist
Owner: Debian-med team
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-...@lists.debian.org
* Package name: biojava6-live
Version : 6.0.5
Upstream Author : BioJava Developers
* URL : https://biojava.org
* License :
Package: lintian-brush
Version: 0.132
Severity: normal
Dear Maintainer,
In the debian/rules file of the source package jmol, I have a rule called
execute_before_mh_install
and lintian-brush reports a typo-in-debhelper-override-target and changes it to
execute_before_dh_install
although
Package: libplexus-interactivity-api-java
Version: 1.1-1
Severity: normal
Hello,
Currently no version information is provided in the shipped POMs for plexus-*,
this is because this information is missing in all POMs in the source although
the child POMs both declare a dependency on two plexus-
Package: groovy
Version: 2.4.21-3
Severity: important
Hello,
The version 2.4.21-3 of groovy that was uploaded yesterday wrongly includes
libservlet-api-ava
as a build-dependency. This mispelled package name has been introduced in an
attempt to solve Bug #1020429.
Build dependencies of
Control: tags -1 + confirmed
Hello,
The issue showing up in the tests is the native library cannot be loaded
properly. Some symbols (at least HDfprintf) cannot be found. I can
investigate next week.
Surprisingly, using sbuild and working in the chroot after the failure
of the tests,
Package: ftp.debian.org
Severity: normal
X-Debbugs-Cc: debian-med-packag...@lists.alioth.debian.org
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Hi,
theseus depends on muscle, which is only available on Intel architectures at
the moment, see bug #1006161 which led to the removal of muscle on
Source: patroni
Version: 2.1.4-1
Severity: normal
Control: affects -1 src:zookeeper src:psycopg2
Dear Maintainer,
The three autopkgtests acceptance-consul, acceptance-etcd and
acceptance-zookeeper began failing at a significant frequency recently, at
least on armhf, independently of each other.
Package: wnpp
Severity: wishlist
Owner: Debian-med team
X-Debbugs-Cc: debian-de...@lists.debian.org, debian-...@lists.debian.org
* Package name: genomicsdb
Version : 1.4.3
Upstream Author : Intel Health and Lifesciences
* URL : https://www.genomicsdb.org/
* License
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