Your message dated Tue, 25 Oct 2022 17:06:40 +0000 with message-id <e1onnnw-00a5ux...@fasolo.debian.org> and subject line Bug#1019478: fixed in libflame 5.2.0-4 has caused the Debian Bug report #1019478, regarding scipy breaks libflame autopkgtest on i386: Floating point exception to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1019478: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1019478 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: scipy, libflame Control: found -1 scipy/1.8.1-9 Control: found -1 libflame/5.2.0-3 Severity: serious Tags: sid bookworm User: debian...@lists.debian.org Usertags: breaks needs-update Dear maintainer(s),With a recent upload of scipy (1.8.1-9, 1.8.1-7 passed) the autopkgtest of libflame fails in testing when that autopkgtest is run with the binary packages of scipy from unstable. It passes when run with only packages from testing. In tabular form:pass fail scipy from testing 1.8.1-9 and later libflame from testing 5.2.0-3 all others from testing from testing I copied some of the output at the bottom of this report.Currently this regression is *not* blocking the migration of scipy to testing [1] (because of bug #1019525). Due to the nature of this issue, I filed this bug report against both packages. Can you please investigate the situation and reassign the bug to the right package?More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation Paul [1] https://qa.debian.org/excuses.php?package=scipy https://ci.debian.net/data/autopkgtest/testing/i386/libf/libflame/25855917/log.gz (Please be aware of: WARNING: log file truncated at 20 MB (before compression) First 1MB is presented above, last 19 MB below )special/tests/test_kolmogorov.py::TestSmirnovi::test_x_equals_0 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_x_equals_1 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_n_equals_1 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_n_equals_2 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_n_equals_3 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_round_trip <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovi::test_x_equals_0point5 <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovp::test_nan <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovp::test_basic <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py PASSED [ 83%] special/tests/test_kolmogorov.py::TestSmirnovp::test_oneminusoneovern <- ../../../../../usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py Fatal Python error: Floating point exceptionCurrent thread 0xf7ba5700 (most recent call first):File "/usr/lib/python3/dist-packages/scipy/special/_testutils.py", line 213 in eval_func_at_params File "/usr/lib/python3/dist-packages/scipy/special/_testutils.py", line 227 in check File "/usr/lib/python3/dist-packages/scipy/special/tests/test_kolmogorov.py", line 213 in test_oneminusoneovern File "/usr/lib/python3/dist-packages/_pytest/python.py", line 192 in pytest_pyfunc_call File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__ File "/usr/lib/python3/dist-packages/_pytest/python.py", line 1761 in runtest File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 166 in pytest_runtest_call File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__ File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 259 in <lambda> File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 338 in from_call File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 258 in call_runtest_hook File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 219 in call_and_report File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 130 in runtestprotocol File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 111 in pytest_runtest_protocol File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__ File "/usr/lib/python3/dist-packages/_pytest/main.py", line 347 in pytest_runtestloop File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__File "/usr/lib/python3/dist-packages/_pytest/main.py", line 322 in _mainFile "/usr/lib/python3/dist-packages/_pytest/main.py", line 268 in wrap_session File "/usr/lib/python3/dist-packages/_pytest/main.py", line 315 in pytest_cmdline_main File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 39 in _multicall File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__ File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 164 in main File "/usr/lib/python3/dist-packages/scipy/_lib/_testutils.py", line 69 in __call__File "<string>", line 1 in <module>Extension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg.lapack_lite, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, scipy._lib._ccallback_c, scipy._lib._fpumode, scipy._lib._test_ccallback, scipy.sparse._sparsetools, scipy.sparse._csparsetools, scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering, scipy.spatial._ckdtree, scipy._lib.messagestream, scipy.spatial._qhull, scipy.spatial._voronoi, scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg._cythonized_array_utils, scipy.linalg._flinalg, scipy.linalg._solve_toeplitz, scipy.linalg._matfuncs_sqrtm_triu, scipy.linalg.cython_blas, scipy.linalg.cython_lapack, scipy.linalg._decomp_update, scipy.spatial._distance_wrap, scipy.spatial._hausdorff, scipy.special._ufuncs_cxx, scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb, scipy.special._ellip_harm_2, scipy.spatial.transform._rotation, scipy.cluster._vq, scipy.cluster._hierarchy, scipy.cluster._optimal_leaf_ordering, scipy._lib._uarray._uarray, scipy.fftpack.convolve, scipy.sparse.linalg._isolve._iterative, scipy.sparse.linalg._dsolve._superlu, scipy.sparse.linalg._eigen.arpack._arpack, scipy.optimize._minpack2, scipy.optimize._group_columns, scipy.optimize._trlib._trlib, scipy.optimize._lbfgsb, _moduleTNC, scipy.optimize._moduleTNC, scipy.optimize._cobyla, scipy.optimize._slsqp, scipy.optimize._minpack, scipy.optimize._lsq.givens_elimination, scipy.optimize._zeros, scipy.optimize.__nnls, scipy.optimize._highs.cython.src._highs_wrapper, scipy.optimize._highs._highs_wrapper, scipy.optimize._highs.cython.src._highs_constants, scipy.optimize._highs._highs_constants, scipy.linalg._interpolative, scipy.optimize._bglu_dense, scipy.optimize._lsap_module, scipy.integrate._odepack, scipy.integrate._quadpack, scipy.integrate._vode, scipy.integrate._dop, scipy.integrate._lsoda, scipy.integrate._test_odeint_banded, scipy.interpolate._fitpack, scipy.interpolate.dfitpack, scipy.interpolate._bspl, scipy.interpolate._ppoly, scipy.interpolate.interpnd, scipy.interpolate._rbfinterp_pythran, scipy.ndimage._nd_image, _ni_label, scipy.ndimage._ni_label, scipy.special.cython_special, scipy.stats._stats, beta_ufunc, scipy.stats._boost.beta_ufunc, binom_ufunc, scipy.stats._boost.binom_ufunc, nbinom_ufunc, scipy.stats._boost.nbinom_ufunc, hypergeom_ufunc, scipy.stats._boost.hypergeom_ufunc, scipy.stats._biasedurn, scipy.stats._hypotests_pythran, scipy.stats._statlib, scipy.stats._mvn, scipy.stats._sobol, scipy.stats._qmc_cy, scipy.stats._unuran.unuran_wrapper, scipy.io.matlab._mio_utils, scipy.io.matlab._streams, scipy.io.matlab._mio5_utils, scipy.io._test_fortran, scipy.ndimage._ctest, _cytest, scipy.ndimage._cytest, scipy.odr.__odrpack, scipy.optimize.cython_optimize._zeros, scipy.signal._sigtools, scipy.signal._max_len_seq_inner, scipy.signal._upfirdn_apply, scipy.signal._spline, scipy.signal._sosfilt, scipy.signal._spectral, scipy.signal._peak_finding_utils, scipy.sparse.linalg._propack._spropack, scipy.sparse.linalg._propack._dpropack, scipy.sparse.linalg._propack._cpropack, scipy.sparse.linalg._propack._zpropack, scipy.special._test_round, scipy._lib._test_deprecation_def, scipy._lib._test_deprecation_call (total: 129) bash: line 1: 3834 Floating point exceptionbash -ec 'python3 -c "import scipy as sp; sp.test('\''full'\'', verbose=3)"' 2> >(tee -a /tmp/autopkgtest-lxc.v3379ep8/downtmp/scipy-with-libflame-stderr 1>&2) > >(tee -a /tmp/autopkgtest-lxc.v3379ep8/downtmp/scipy-with-libflame-stdout)autopkgtest [05:57:29]: test scipy-with-libflame: -----------------------]OpenPGP_signature
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--- Begin Message ---Source: libflame Source-Version: 5.2.0-4 Done: Mo Zhou <lu...@debian.org> We believe that the bug you reported is fixed in the latest version of libflame, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1019...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Mo Zhou <lu...@debian.org> (supplier of updated libflame package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Tue, 25 Oct 2022 12:39:03 -0400 Source: libflame Architecture: source Version: 5.2.0-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers <debian-science-maintain...@lists.alioth.debian.org> Changed-By: Mo Zhou <lu...@debian.org> Closes: 1018074 1019478 1019525 Changes: libflame (5.2.0-4) unstable; urgency=medium . * rules: fix the logic for dh_auto_test. * Disable autopkgtest with numpy, scipy, and octave. They are not yet compiled against libflame. (Closes: #1019525, #1019478, #1018074) Checksums-Sha1: 57dbaa4d04f715c58b4cbbcae08de70c465f387f 2181 libflame_5.2.0-4.dsc 4e9a90e57051221d01aee6ea4959211c0836b598 23920 libflame_5.2.0-4.debian.tar.xz 8fb41c548ec6d711c622da1fd19651cb8064cc46 6448 libflame_5.2.0-4_source.buildinfo Checksums-Sha256: f9f9bbc6418eace663dca0197dc6f14437d117c792edd21bfb32543fedc475a9 2181 libflame_5.2.0-4.dsc b249f0005a056fcd547549715cb6b18c1715762300d5e7671140aa31b02272fd 23920 libflame_5.2.0-4.debian.tar.xz 06f72181047312e81a219aeb4dc429e092db2cd046288a954e827bc8594c2b19 6448 libflame_5.2.0-4_source.buildinfo Files: 86fb9778b0c371fddc6429330ae6a444 2181 math optional libflame_5.2.0-4.dsc 4281a015f3ef23294ca882e5fc5312b5 23920 math optional libflame_5.2.0-4.debian.tar.xz f3dd44e8851573d1fb358a46bbec482e 6448 math optional libflame_5.2.0-4_source.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEY4vHXsHlxYkGfjXeYmRes19oaooFAmNYEawRHGx1bWluQGRl Ymlhbi5vcmcACgkQYmRes19oaorxZhAApNjvvXMciJt6ULWUx0rw/Lx5SMXfNdJa lefmPGoFIlYqG6irzeoxCeyCKtRFXuTFbgy5kl2/bDlg35Otd01uVBgKpz6Xm9Z4 hblH939jwe5uwOXjGsR6E8UM3gOLKuondS8nRLTiFyuyHSZegkYXSY2B/FY1FmFH 6CSKPYH7HQ+RMUv0AV+Oq0BP8IxqAShB2/oFDMY5UHtXRCEbzJBgfoipy2Hxy/Ry sWunn0AHLosauxxp5q1bWhKpE/WznORzt/x7UQjJkHBVTfuiFYAmOzsLwZJwU+a/ ztJtEsIiRjr4xEZQHYWwVlY8vJTL+LekaPFxzBkrT9qEeFvFl5gGfQo+i4pYqwEb zIgNyK9ASEWr+GgkXn2a/AgU4j17rcdC1G3xiw26LkXmhxlWIRhQu5sOvhHX2tub LOFXUyu8WTSF/CUOODiUIyoGNbnsYhFfnvxWkQMJc++Me1UnvnlGYSfou62fj3By j0crCJCAmPX3JYmVJ6IW4NCME6jJz+hh2QhLByAAI7KXbi7rGrb6UpHoNo6qzUFi Ejaln1qc8Dm5Mhr2y7KhswY/LZsjPnjPBtK0BaGpAsyj8Dhtyw3y0F8hexIwBZyL 2yPnItSfyjn+2JUqmoXAK2HSDoq59k8HpZQwrIBz4SpoGMW/qMVHU91VTO1wsTXY us1X2RQg8ag= =zgjn -----END PGP SIGNATURE-----
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