Bug#986592: [Help] Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-09 Thread Aaron M. Ucko
Control: reassign -1 kaptive 0.7.3-1 Andreas Tille writes: > Thanks a lot. Its very relieving to know a competent person behind > this I appreciate the kind words, but am alas unclear on where precisely BLAST+ is going wrong here. That said, I do see that future releases will incorporate an

Processed: Re: [Help] Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-09 Thread Debian Bug Tracking System
Processing control commands: > reassign -1 kaptive 0.7.3-1 Bug #986592 [src:kleborate] kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread Bug reassigned from package 'src:kleborate' to 'kaptive'. No longer marked as found in versions kleborate/2.0.1-1. Ignoring request to

Bug#986592: [Help] Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-09 Thread Andreas Tille
On Fri, Apr 09, 2021 at 08:13:52AM -0400, Aaron M. Ucko wrote: > Don't worry, I am still looking into this crash, and had primarily > intended that comment as a public note to myself -- the crash occured > within a (presumably valid) call to ncbi-blast+, and wound up taking > quite a few tries to

Bug#986592: [Help] Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-09 Thread Aaron M. Ucko
Andreas Tille writes: > Thanks a lot for your investigation. Unfortunately I have no idea how > to proceed from here. Does anybody have an idea? I mean a better idea > than just stating this package does not work on arm64 which would > probably some last resort. Don't worry, I am still

Bug#986592: [Help] Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-09 Thread Andreas Tille
Hi Aaron, On Fri, Apr 09, 2021 at 12:01:21AM -0400, Aaron M. Ucko wrote: > Never mind, this appears to be a different issue, per a backtrace > obtained with EXCEPTION_STACK_TRACE_LEVEL=Error and a great deal of > patience: > > Error: tblastn encountered an error: > terminate called after

Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-08 Thread Aaron M. Ucko
u...@debian.org (Aaron M. Ucko) writes: > Andreas Tille writes: > >> do you have possibly any hint what might be wrong here? > > Thanks for calling this bug to my attention! Based on reports I've seen > upstream, I suspect the problem may lie in some relatively new > usage-reporting code that

Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-07 Thread Aaron M. Ucko
Andreas Tille writes: > do you have possibly any hint what might be wrong here? Thanks for calling this bug to my attention! Based on reports I've seen upstream, I suspect the problem may lie in some relatively new usage-reporting code that Debian should probably disable by default regardless,

Processed: Re: Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-07 Thread Debian Bug Tracking System
Processing control commands: > tags -1 help Bug #986592 [src:kleborate] kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread Added tag(s) help. -- 986592: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=986592 Debian Bug Tracking System Contact ow...@bugs.debian.org with

Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-07 Thread Andreas Tille
Control: tags -1 help Hi Aaron, do you have possibly any hint what might be wrong here? Kind regards Andreas. On Wed, Apr 07, 2021 at 09:35:42PM +0200, Paul Gevers wrote: > Source: kleborate > Version: 2.0.1-1 > Severity: serious > Tags: sid bullseye > X-Debbugs-CC:

Bug#986592: kleborate: flaky arm64 autopkgtest: Mutex is not owned by current thread

2021-04-07 Thread Paul Gevers
Source: kleborate Version: 2.0.1-1 Severity: serious Tags: sid bullseye X-Debbugs-CC: debian...@lists.debian.org User: debian...@lists.debian.org Usertags: flaky Dear maintainer(s), Your package has an autopkgtest, great. However, I looked into the history of your autopkgtest [1] and I noticed