Hi,
while I contacted the release team previously[0] there was no response
so far. I tried to establish this first contact since I consider the
release team of really high relevance. Meanwhile I have added some
more information to my contact mails including advertising a DebConf
event (see
Am Wed, May 08, 2024 at 01:18:44AM +0200 schrieb Santiago Vila:
> Package: release.debian.org
> Severity: normal
> Tags: bullseye
> User: release.debian@packages.debian.org
> Usertags: pu
> X-Debbugs-Cc: b...@packages.debian.org, sanv...@debian.org
> Control: affects -1 + src:bart
>
> [
Hi,
as promised I'd like to contact all teams inside Debian which I like
to do today to the release team.
Currently I don't have any urgent questions for your team. More general
I would love to learn how you organise / share your workload. Do you
have some regular team meatings? If yes I'd
Hi Sebastian,
thank you for your work on t64 transition.
Am Thu, Apr 18, 2024 at 09:22:02PM +0200 schrieb Sebastian Ramacher:
I've spotted these Debian Med packages.
> gentle
> jellyfish
> quorum
> sbmltoolbox
No idea how we can help here. Please let us know if we can do
something.
> anfo
Hi Graham,
Am Sun, Dec 17, 2023 at 02:11:47PM -0100 schrieb Graham Inggs:
> There are some packages that have still not migrated since the
> previous r-api-bioc-3.17 transition in July 2023.
>
> Links to their tracker pages, which should tell you what is needed, follow:
>
>
Hi Paul,
Am Wed, Dec 13, 2023 at 09:56:14PM +0100 schrieb Paul Gevers:
> > > Not built on buildd: arch all binaries uploaded by tille, a new
> > > source-only upload is needed to allow migration
> >
> > I do not understand this line. What exact package needs a source-only
> > upload?
>
> You
Hi Graham,
Am Wed, Dec 13, 2023 at 12:13:54PM -0100 schrieb Graham Inggs:
> I've added removal hints for r-bioc-dss and r-bioc-demixt. Please
> file an RC bug for r-bioc-dss to prevent it from migrating straight
> back (r-bioc-demixt already has #1058278).
Done for r-bioc-dss.
> One problem I
Hi,
as you might have noticed the upstream source for r-bioc-dss and
r-bioc-demixt are missing and upstream did not answered two mails about
this. Since the transition looks clean for me so far[1] after I fixed
two autopkgtest issues yesterday I (naively) think we could remove
r-bioc-dss and
Hi,
could someone please have a look at the source download?
Thank you
Andreas.
Am Fri, Dec 08, 2023 at 04:04:27PM +0100 schrieb Andreas Tille:
> Hi,
>
> when looking at
>
> https://bioconductor.org/packages/release/bioc/html/DSS.html
>
> and following the
Hi again,
could someone please have a look at the source download?
Thank you
Andreas.
Am Fri, Dec 08, 2023 at 04:01:17PM +0100 schrieb Andreas Tille:
> Hi,
>
> when looking at
>
> https://bioconductor.org/packages/release/bioc/html/DeMixT.html
>
> and follo
Am Mon, Dec 11, 2023 at 01:36:38PM +0100 schrieb Sebastian Ramacher:
> > OK, but what is your suggestion? Reverting and have broken tests due to
> > the pandoc issue?
>
> pandoc is fixed in unstable.
Really? Salsa CI[1] says:
pandoc : Depends: pandoc-data (>= 3.0.1+ds) but 3.0.1-3 is to be
Hi Sebastian,
Am Mon, Dec 11, 2023 at 11:29:24AM +0100 schrieb Sebastian Ramacher:
> > > I found a workaround; demote pandoc from a Depends to a Recommends in
> > > the r-cran-rmarkdown package. It seems that pandoc is not used for
> > > building, at least for r-bioc-biovizbase, -degnorm,
Hi,
when looking at
https://bioconductor.org/packages/release/bioc/html/DSS.html
and following the link "Source Archive" at bottom of the page linking
to
https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/DSS/
I can only see
Page Not Found
The page you were looking
Hi,
when looking at
https://bioconductor.org/packages/release/bioc/html/DeMixT.html
and following the link "Source Archive" at bottom of the page linking
to
https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/DeMixT/
I can only see
Page Not Found
The page you were
Am Thu, Dec 07, 2023 at 04:09:28PM +0100 schrieb Andreas Tille:
> I'll take this
> occurence as a reason to fail with an error in dh-r to avoid such cases
> in future.
Done in
https://salsa.debian.org/r-pkg-team/dh-r/-/commit/e4c348832b3d99ba7bc8f7670085b9b21323f7b6
The check coul
Hi Graham,
Am Thu, Dec 07, 2023 at 01:37:02PM -0100 schrieb Graham Inggs:
> On Sun, 3 Dec 2023 at 07:21, Andreas Tille wrote:
> > I have no idea how to work around this.
>
> I found a workaround; demote pandoc from a Depends to a Recommends in
> the r-cran-rmarkdown
Hi Adrian,
Am Sun, Dec 03, 2023 at 11:15:49PM +0200 schrieb Adrian Bunk:
> > And it also means that r-bioc-biocgenerics is now blocked on the haskell
> > transition. Lovely. Good thing that pandoc is supposed to be the last piece
> > in that several months long transition.
>
> It's only blocked
Hi Steffen,
you are listed as Uploader of r-bioc-nanostringqcpro. This package
was removed by Bioconductor in release 3.18. Please decide what to
do with this package and act accodingly.
Kind regards
Andreas.
--
http://fam-tille.de
Hi,
Am Sun, Dec 03, 2023 at 09:51:38PM +0100 schrieb Paul Gevers:
>
> And it also means that r-bioc-biocgenerics is now blocked on the haskell
> transition. Lovely. Good thing that pandoc is supposed to be the last piece
> in that several months long transition.
... which on the other hand
Hi,
Charles Plessy and I uploaded r-bioc-* packages until level 11.
Unfortunately building of some packages seems to be blocked for
A: some pandoc dependency reason
pandoc depends on missing:
- pandoc-data:amd64 (< 2.17.1.1-3.~)
resolved and for you to be able to start your transition within the
> next few days. We don't want to start a big transition and have it
> blocked on missing builds or installability issues on mips64el.
Perfectly understandable.
> On Sun, 26 Nov 2023 at 15:20, Andreas Tille wrote:
>
Am Tue, Nov 28, 2023 at 09:22:18AM +0900 schrieb Charles Plessy:
> would it be possible to have an estimation about when we can expect to
> start the Bioconductor transition ? I am contributing to Debian mostly
> on my work time and it would be super useful for me to have this
> information in
Hi again,
Am Sun, Nov 26, 2023 at 05:20:27PM +0100 schrieb Andreas Tille:
> > > The remaining regressions seen are caused by unrelated uploads of
> > > r-cran-seurat/r-cran-seuratobject on 2023-11-01 and
>
> r-cran-seuratobject 5.0.1-1 has migrated to testing to
Hi Graham,
Am Fri, Nov 24, 2023 at 10:20:38PM +0100 schrieb Andreas Tille:
> > Closing now because there's nothing to be done in rmatrix.
> >
> > The remaining regressions seen are caused by unrelated uploads of
> > r-cran-seurat/r-cran-seuratobject on 2023-11-01 and
r-c
Hi Paul,
Am Fri, Nov 24, 2023 at 11:17:34AM +0100 schrieb Paul Gevers:
> On Wed, 22 Nov 2023 20:46:17 +0100 Andreas Tille wrote:
> > Control: tags -1 - moreinfo
> >
> > r-bioc-sparsearray is accepted in unstable.
>
> Well, Graham wrote "remove the 'moreinfo'
Control: tags -1 - moreinfo
r-bioc-sparsearray is accepted in unstable.
Kind regards
Andreas.
--
http://fam-tille.de
Am Fri, Nov 17, 2023 at 10:12:02AM -0600 schrieb Dirk Eddelbuettel:
> Leaving
>
>r-cran-irlba
>r-cran-openmx
>
> for you (unless you got to it already).
To make it pretty clear: I will not simply rebuild these packages before
we have a promising solution for the future. If you do not
Am Tue, Nov 14, 2023 at 04:49:01PM -0600 schrieb Dirk Eddelbuettel:
>
> On 14 November 2023 at 16:17, Dirk Eddelbuettel wrote:
> |
> | On 14 November 2023 at 11:06, Andreas Tille wrote:
> | | Am Mon, Nov 13, 2023 at 07:23:06AM -0600 schrieb Dirk Eddelbuette
Hi Dirk,
Am Mon, Nov 13, 2023 at 07:23:06AM -0600 schrieb Dirk Eddelbuettel:
> Most of these are not in Debian but I think we need binary rebuilds of
>
>irlba because of headers
>OpenMx because of headers, a new upstream 2.21.10 is out too
>TMB
Am Fri, Nov 10, 2023 at 11:26:21PM +0100 schrieb Andreas Tille:
>
> What about a compromise. We start the transition, r-bioc-s4arrays is in
> ...
Thanks to the hint from Charles I found that SparseArray is not new in
Bioconductor and we can build the previous version with the current
Hi ftpmasters,
we want to start the transition from Bioconductor version 3.17 to 3.18.
The release team asked us to make sure there will be no packages missing
in Debian that needs to pass new queue first to maintain some smooth
transition. Thus I uploaded the only missing package
Hi Paul,
Am Fri, Nov 10, 2023 at 08:39:18PM +0100 schrieb Paul Gevers:
> On 10-11-2023 11:56, Andreas Tille wrote:
> > The only new dependency we need is SparseArray. However, we cannot
> > upload the package to new since it needs r-bioc-s4arrays (>= 1.1.6) for
> > buil
Control: tags -1 - moreinfo
Hi,
Am Fri, Nov 10, 2023 at 05:43:43PM +0900 schrieb Charles Plessy:
> Hi Paul and everybody,
I admit Paul's mail was convincing enough to dive deeper into this. I
also need to admit that hacking together some scripts doing the job was
less effort than I expected,
Hi Dirk,
Am Tue, Nov 07, 2023 at 12:28:22PM -0600 schrieb Dirk Eddelbuettel:
>
> "Kinda. Sorta. Not fully." I have written related code doing most of this
> during the many attempt for 'turning CRAN into .deb packages'.
> ...
Sounds like another idea how this problem can be turned into code
Hi Sebastian,
Am Tue, Nov 07, 2023 at 03:12:39PM +0100 schrieb Sebastian Ramacher:
> > Charles and I tried to explain in different ways: We do not have simple
> > means to answer this question.
>
> Picking a random r-bioc-* package:
>
Hi Dirk,
Am Tue, Nov 07, 2023 at 07:40:38AM -0600 schrieb Dirk Eddelbuettel:
>
> On 7 November 2023 at 22:01, Charles Plessy wrote:
> | One possible direction would be to leverage the work done by Dirk and
> | others in r2u, where the Bioc transition is over, and for each package
> | in Debian,
Hi Sebastian,
Am Tue, Nov 07, 2023 at 10:53:00AM +0100 schrieb Sebastian Ramacher:
> Control: tags -1 moreinfo
I admit I'm not really happy about the bug ping-pong.
> > I just finished inspecting by eye the homepage of each of the 69 new
> > Bioconductor packages. None of them declare a
Inggs:
> > > Again, we are not asking for the entire transition to happen in
> > > experimental. We are only asking for the NEW packages, so that NEW
> > > processing happens before the transition, and not during.
>
> Le Wed, Nov 01, 2023 at 11:28:38AM +0100,
Hi Graham,
Am Wed, Nov 01, 2023 at 09:02:10AM -0100 schrieb Graham Inggs:
> > Sorry, my question was probably confusing. I was not talking about the
> > new packages. I was talking about the 170 r-bioc-* packages. If I
> > upload these to experimental, will it be necessary to upload these to
>
Hi Graham,
Am Sun, Oct 29, 2023 at 02:57:01PM -0100 schrieb Graham Inggs:
> Hi Andreas
>
> On Sun, 29 Oct 2023 at 04:33, Andreas Tille wrote:
> > Can you confirm that packages uploaded to experimental can be moved in
> > one rush from experimental to unstable without extra
Hi Graham,
Am Sat, Oct 28, 2023 at 04:55:24PM + schrieb Graham Inggs:
>
> Please remove the 'moreinfo' tag once all NEW packages needed for this
> transition have been uploaded to experimental and have passed through
> NEW review.
Can you confirm that packages uploaded to experimental can
Am Fri, Oct 27, 2023 at 09:19:22AM -0500 schrieb Dirk Eddelbuettel:
>
> | BioConductor has just released version 3.17. Since the next r-base
>
> Typo: 3.18
Yes. Thanks for pointing this out.
> | release is pending on 2023-10-31 we do not think it is a good idea to
> | start the transition
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: r-bioc-biocgener...@packages.debian.org, debia...@lists.debian.org
Control: affects -1 + src:r-bioc-biocgenerics
Hi,
BioConductor has just released version 3.17. Since
Control: tags -1 - moreinfo
Am Tue, Aug 22, 2023 at 06:43:46PM +0200 schrieb Paul Gevers:
>
> Hi Andreas,
> > rgdal will run out of upstream support soon. Since the package created
> > failures with newer upstream versions of other packages (see bug
> > #1049438) it should be removed from
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: rm
X-Debbugs-Cc: r-cran-rg...@packages.debian.org, 1049...@bugs.debian.org
Control: affects -1 + src:r-cran-rgdal
Hi,
as per upstream
Hi Graham,
Am Wed, Aug 16, 2023 at 09:23:00PM + schrieb Graham Inggs:
> tracker.d.o. is having some issues (see #1043546), but you can still
> access up-to-date excuses here:
> https://qa.debian.org/excuses.php?package=r-bioc-biocgenerics
>
> The current blocker I see is:
> Implicit
Hi,
the last new precondition was accepted so all r-bioc-* packages are
uploaded and built meanwhile. The only not-transitioned package is
r-bioc-bitseq where I filed a removal bug for[1]. So we have at least
all r-bioc-* packages in their current version.
[1] https://bugs.debian.org/1049359
Hi Paul,
Am Sat, Jul 29, 2023 at 07:44:32PM +0200 schrieb Paul Gevers:
>
> Well, I didn't check everything yet (hint is at [1])
Thanks for the hint - this was the point I wanted to make with my mail.
> but at least the
> autopkgtest regression in r-bioc-rhdf5filters (see [2] to find that in
>
Hi,
all r-bioc-* packages except
r-bioc-bitseq
which is not maintained upstream and should probably be removed (as in
the last transition) and
r-bioc-scater
r-bioc-deseq
r-bioc-isoformswitchanalyzer
are uploaded. The latter three have new dependencies which are uploaded
to new.
Hi ftpmasters,
this package is needed to complete the Transitions r-api-bioc-3.17[1]
since it is a new dependency of package r-bioc-scater.
Thanks a lot in advance for processing this package quickly
Andreas.
[1] https://release.debian.org/transitions/html/r-api-bioc-3.17.html
Am Thu, Jul
Control: block -1 by 1042368
--
http://fam-tille.de
Control: block -1 by 1041598
Hi,
it has turned out that there is a new dependency for the new version of
package r-bioc-delayedarray. The new package r-bioc-s4arrays is
uploaded to new but I record the ITP bug here as a blocker to record
that issue.
Usually ftpmaster is helpful and quick in
Hi,
I've just pushed r-bioc-rhdf5filters to salsa[1]. We are replacing code
copies of several compression related libs by the Debian equivalents.
Seems upstream added zstd and thus I added libzstd-dev to Build-Depends
and tried to fix the according patch. But it went more complex. The
issues
regards
Andreas.
Am Mon, Jul 17, 2023 at 04:08:53PM +0200 schrieb Andreas Tille:
> Hi,
>
> the BioC transition can be started now. I'm kind of offline-ish for a
> couple of hours today and a bit tired. May be I'll start tomorrow. For
> those who do not want to wait fee
Am Sat, Jul 08, 2023 at 10:35:17PM +0200 schrieb Paul Gevers:
> Indeed, I think the pattern is that if we test in testing, with r-cran from
> unstable and r-cran-tibble from testing it fails, but with r-cran from
> unstable and r-cran-tibble from unstable, it works.
>
> I'm working my through the
Control: reopen -1
Thanks for watching me, Bas.
Am Fri, Jul 07, 2023 at 05:09:31PM +0200 schrieb Sebastiaan Couwenberg:
> It seems that dh-r (20230707) should have closed #1040515 instead of the
> transition bug report (#1040001).
--
http://fam-tille.de
Am Fri, Jul 07, 2023 at 12:52:49AM +0530 schrieb Nilesh Patra:
>
> Andreas, if you remember, the code pointed out by Sébastien is
> the exact same reason we had to t-p-u r-cran-shiny during freeze, See
>
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1035428#15
>
Hi Sébastien,
Am Thu, Jul 06, 2023 at 09:13:46PM +0200 schrieb Sébastien Villemot:
> > I'm not sure so please explain in more detail. dh-r was designed to put
> > the lowest restriction regarding the versions. I remember some
> > discussion some time ago that Dirk thought we should put stronger
Hi,
Am Thu, Jul 06, 2023 at 08:28:45PM +0200 schrieb Paul Gevers:
> On 06-07-2023 19:08, Paul Gevers wrote:
> > Yes, we'll take care of that where it looks sane to do so (examples of
> > that are r-cran-epi); I'll manually schedule the "combined" tests, such
> > that they disappear from the
Hi Paul,
Am Thu, Jul 06, 2023 at 07:08:04PM +0200 schrieb Paul Gevers:
> Yes, we'll take care of that where it looks sane to do so (examples of that
> are r-cran-epi); I'll manually schedule the "combined" tests, such that they
> disappear from the excuses if they then pass.
OK. Thanks a lot
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: r-bioc-biocgener...@packages.debian.org, debia...@bugs.debian.org
Control: affects -1 + src:r-bioc-biocgenerics
Hi,
BioConductor has released version 3.17 when we were in
Hi again,
Am Thu, Jul 06, 2023 at 09:56:31AM +0200 schrieb Andreas Tille:
>
> I've now re-uploaded all 6 packages that are known to be affected by the
> graphics ABI change (and verified that it is set properly). I'll
> continue now closing the open bugs.
After rebuilding quite s
Hi,
Am Wed, Jul 05, 2023 at 04:07:12PM + schrieb Graham Inggs:
> I don't think it's possible to set up a tracker for this first
> "transition", as no packages currently depend on r-graphics-engine-*.
Right, this makes perfectly sense.
> Please wait until r-base and dh-r are built and in
Hi,
the just uploaded r-base 4.3.1-2 implements r-graphics-engine-* which is
respected by dh-r 20230705 (also just uploaded). It would be great if
you could setup transition tracker.
Am I understanding things correctly that I can now start uploading those
r-cran-* packages featuring bugs
Control: block -1 by 1040038
Hi Paul,
Am Sun, Jul 02, 2023 at 10:54:03AM +0800 schrieb Paul Wise:
> $ objdump -T debian/*/usr/lib/R/site-library/*/libs/*.so | grep
> R_GE_checkVersionOrDie
> DF *UND* Base
> R_GE_checkVersionOrDie
Thanks for the hint. Its
Hi Graham,
Am Mon, Jul 03, 2023 at 05:24:19PM + schrieb Graham Inggs:
> On Sun, 2 Jul 2023 at 19:57, Andreas Tille wrote:
> > 45
> >
> > serious bugs that are all caused by the non-transition while we should
> > have done one. That's pretty annoying fo
Hi Paul,
Am Sat, Jul 01, 2023 at 05:21:16PM +0200 schrieb Paul Gevers:
> > So per upstream ("R Core" for short), this is clearly on the package
> > side. There is no ABI/API incompatibility: R offers graphics functions new
> > functionality, to use it one needs a rebuild _if a package decides to
Hi again,
just a status update:
Am Sat, Jul 01, 2023 at 01:45:11PM +0200 schrieb Andreas Tille:
>
> I think my piece is ready. We just need to decide about a proper name
> of the virtual package. I'll inject this into my proof of concept
> change of dh-r. Than Dirk needs to uplo
Hi Paul,
Am Sat, Jul 01, 2023 at 07:48:16AM +0200 schrieb Paul Gevers:
> Anytime is good to ask for a transition, particularly when the transition is
> already ongoing.
:-)
> I don't think it should surprise anyone that we prefer it to be done right.
> Our preference is for option 1.
Thanks
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: transition
X-Debbugs-Cc: r-b...@packages.debian.org, debia...@lists.debian.org
Control: affects -1 + src:r-base
Hi,
I'm not sure that we are in the right status to ask for a transition bug
since
Hi Bas,
(this is just an example bug out of a lot you filed)
Am Wed, Jun 28, 2023 at 08:11:05AM +0200 schrieb Bas Couwenberg:
> 189s DLL requires the use of native symbols
I wonder, whether all those bugs against single r-* packages are
sensible. As far as I can see we simply need a
Am Tue, Jun 27, 2023 at 06:31:28AM +0200 schrieb Rene Engelhard:
>
> Andreas, you can upload r-cran-hunspell.
Uploaded. Thanks a lot for the ping
Andreas.
--
http://fam-tille.de
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
X-Debbugs-Cc: debian-scie...@packages.debian.org,
debian-scie...@lists.debian.org
Control: affects -1 + src:debian-science
Please unblock package debian-science
[ Reason ]
This is the
Hi Paul,
Am Tue, May 23, 2023 at 01:52:38PM +0200 schrieb Paul Gevers:
> Control: tags -1 confirmed
Thanks.
> On 17-05-2023 19:48, Andreas Tille wrote:
> > I'd like to announce an upload to testing-proposed-updates
>
> You confused me here. I don't see traces of the uploa
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
X-Debbugs-Cc: debian-...@packages.debian.org, debian-...@lists.debian.org
Control: affects -1 + src:debian-med
Please unblock package debian-med
[ Reason ]
This is the final update of the
iny (1.7.4+dfsg-3~deb12u1) bookworm; urgency=medium
+
+ * Upload to testing-proposed-updates "bookworm" due to the fact that
+there was an accidental upload of a new version of r-base to unstable
+
+ -- Andreas Tille Wed, 17 May 2023 07:56:25 +0200
+
r-cran-shiny (1.7.4+dfsg-3) unst
Am Wed, May 17, 2023 at 02:07:22PM +0530 schrieb Nilesh Patra:
> On Wed, May 17, 2023 at 08:58:58AM +0200, Andreas Tille wrote:
> > I hope I was following developers reference about t-p-u[6] correctly
> > and pushed
> > I've choosen the version 1.7.4+dfsg-3~deb12u1 to matc
hangelog
@@ -1,3 +1,10 @@
+r-cran-shiny (1.7.4+dfsg-3~deb12u1) bookworm; urgency=medium
+
+ * Upload to testing-proposed-updates "bookworm" due to the fact that
+there was an accidental upload of a new version of r-base to unstable
+
+ -- Andreas Tille Wed, 17 May 2023 07:56:
Am Tue, May 16, 2023 at 07:49:55PM +0530 schrieb Nilesh Patra:
> On Tue, May 16, 2023 at 07:25:15PM +0530, Nilesh Patra wrote:
> > I personally prefer "1" over 2 as it is less noise (and effort).
>
> On second thoughts, I think sending it via testing-proposed-updates
> would be a better thing to
Hi,
when fixing bug #1035428 I realised test suite issues with
r-cran-thematic [1]
-> Error in `svglite_(filename, bg, width, height, pointsize, standalone,
always_valid)`: Graphics API version mismatch
r-cran-treescape [2]
r-cran-treespace [3]
-> error is given if lambda is
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: rm
X-Debbugs-Cc: igdisco...@packages.debian.org, 1032...@bugs.debian.org,
steffen_moel...@gmx.de
Control: affects -1 + src:igdiscover
According to bug #1032975 the package is non-functional and
-frameworks-dev
+
+ -- Andreas Tille Mon, 06 Mar 2023 12:01:06 +0100
+
+debian-pan (0.4~exp) experimental; urgency=medium
+
+ * Team upload.
+
+ [ Picca Frédéric-Emmanuel ]
+ * updated the task.
+
+ [ Andreas Tille ]
+ * Fix debian/copyright
+ * Standards-Version: 4.6.2
+
+ * start of automatic
[Release team in CC]
Am Wed, Mar 15, 2023 at 08:45:21AM +0530 schrieb Nilesh Patra:
> I am removing myself from the uploaders field/maintenance of tiledb-py. Feel
> free to update it once tiledb is ready for migration. The repository
> lives at python team namespace.
I admit I'm strongly in
Am Thu, Mar 09, 2023 at 10:08:02PM +0100 schrieb Sebastian Ramacher:
> > What do you think?
>
> std::string_view was introduced in C++17, but r-cran-qpdf is building
> with C++11. Have you tried bumping the C++ version?
Ahhh, right. Thanks a lot for the hint. Just uploaded a fix.
I guess I
Hi,
Am Wed, Mar 08, 2023 at 09:30:38PM +0100 schrieb Lucas Nussbaum:
> > /usr/include/qpdf/QPDF.hh:1569:36: error: ‘std::string_view’ has not been
> > declared
> > 1569 | void linearizationWarning(std::string_view);
> > |^~~
> > In file
Hi,
to fix
#1030884 python-cogent: FTBFS (ImportError: cannot import name 'float' from
'numpy')
and let it migrate to testing it needs to wait for
#950598 python3-jupyter-sphinx: package relies on unavailable
`ipywidgets.embed` module
which in turn needs
#896460 Please package
Hi Graham,
Am Wed, Jan 25, 2023 at 02:28:37PM +0200 schrieb Graham Inggs:
> On Wed, 25 Jan 2023 at 11:43, Andreas Tille wrote:
> > I was motivated for this patch by Diane's statement on the Debian Med
> > matrix channel that dask and dask.distributed are interconnected. If
>
Hi Graham
Am Tue, Jan 24, 2023 at 12:50:41PM +0200 schrieb Graham Inggs:
>
> On Tue, 24 Jan 2023 at 00:16, Rebecca N. Palmer
> wrote:
> > The remaining autopkgtest failures blocking pandas are:
> > - dipy/amd64 and snakemake/i386 look like random flakiness: please retry
> > them. (I think DMs
Am Tue, Jan 17, 2023 at 01:04:50AM +0100 schrieb Thomas Goirand:
> > > #1023965 [src:pandas] pandas FTBFS with Python 3.11 as supported
> > > version
> > > #1024031 [src:numba] numba FTBFS with Python 3.11 as supported version
>
> I saw the above 2 were fixed.
Fixed in the sense that
Am Sat, Jan 07, 2023 at 09:05:21AM +0100 schrieb Andreas Tille:
> Hi Thomas,
>
> Am Thu, Jan 05, 2023 at 01:57:43PM +0100 schrieb Thomas Goirand:
> >
> > This has since already been discussed here: the final decision was to "at
> > least try 3.11", which is e
Am Mon, Jan 09, 2023 at 01:44:40PM +0200 schrieb Graham Inggs:
> Hi Rebecca
>
> On Fri, 6 Jan 2023 at 10:30, Rebecca N. Palmer
> wrote:
> > Should this go ahead before the freeze? I think yes if the new dask
> > works, but am open to disagreement.
>
> Please go ahead. With numpy 1:1.24.1-2
Hi Thomas,
Am Thu, Jan 05, 2023 at 01:57:43PM +0100 schrieb Thomas Goirand:
>
> This has since already been discussed here: the final decision was to "at
> least try 3.11", which is exactly what we're doing.
I admit I was not at site and may be I missunderstood what was finally
decided. From
Am Thu, Dec 08, 2022 at 06:08:04PM +0100 schrieb Sebastian Ramacher:
> It did. Closing.
Thanks a lot
Andreas.
--
http://fam-tille.de
Am Sun, Dec 04, 2022 at 12:22:53PM +0100 schrieb Sebastian Ramacher:
> No, it's not. If you check the logs from r-bioc-htsfilter for example
> (https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-htsfilter/28944996/log.gz),
> you see that some packages have actual regressions:
The log
Am Sat, Dec 03, 2022 at 10:53:58PM +0100 schrieb Sebastian Ramacher:
> And there are many more. r-bioc-biocparallel is another one. This smells
> like many insufficient dependencies.
Sorry, this all seems to be the same britney failure Paul was reporting.
The tests are all against the versions in
Hi Paul,
Am Sat, Dec 03, 2022 at 09:34:09PM +0100 schrieb Paul Gevers:
> On 29-11-2022 10:26, Andreas Tille wrote:
> > Now there is only one remaining one which is a real
> > problem which I have reported upstream (see bug #1025045). If
> > r-bioc-structuralvariantannota
Hi again,
Am Mon, Nov 28, 2022 at 09:32:13PM +0100 schrieb Andreas Tille:
> So you want to say, the fact that the current debci results that are
> listed on the r-bioc-biocgenerics page are based on packages that are
> replaced in unstable and the current packages that are fixed are not
Hi Paul,
Am Mon, Nov 28, 2022 at 08:23:12PM +0100 schrieb Paul Gevers:
> > I'm constantly checking the tracker page of r-bioc-biocgenerics[1] to
> > follow the transition status. I realised that debci picks old, not yet
> > fixed package versions like:
> >
> >
Hi,
I'm constantly checking the tracker page of r-bioc-biocgenerics[1] to
follow the transition status. I realised that debci picks old, not yet
fixed package versions like:
r-bioc-biocfilecache/2.4.0+dfsg-1 while 2.4.0+dfsg-2 is in unstable
r-bioc-biocsingular/1.12.0+ds-1 while
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