pspp 1.2.0-5 MIGRATED to testing

FYI: The status of the pspp source package in Debian's testing distribution has changed. Previous version: (not in testing) Current version: 1.2.0-5 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will

lasagne is marked for autoremoval from testing

lasagne 0.1+git20200419.5d3c63c+ds-1 is marked for autoremoval from testing on 2020-06-01 It is affected by these RC bugs: 959647: lasagne: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.8 returned exit code 13 -- debian-science-maintainers mailing list

sasmodels is marked for autoremoval from testing

sasmodels 1.0.1-1 is marked for autoremoval from testing on 2020-06-01 It is affected by these RC bugs: 959572: sasmodels: FTBFS: TypeError: object of type cannot be safely interpreted as an integer. -- debian-science-maintainers mailing list

sasview is marked for autoremoval from testing

sasview 5.0.1-2 is marked for autoremoval from testing on 2020-06-01 It is affected by these RC bugs: 959626: sasview: FTBFS: error: [Errno 2] No such file or directory: '/<>/docs/sphinx-docs/build/latex/SasView.pdf' -- debian-science-maintainers mailing list

apertium-oci-fra 0.3.0-3 MIGRATED to testing

FYI: The status of the apertium-oci-fra source package in Debian's testing distribution has changed. Previous version: 0.3.0-2 Current version: 0.3.0-3 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you

apertium-eng-cat 1.0.1-3 MIGRATED to testing

FYI: The status of the apertium-eng-cat source package in Debian's testing distribution has changed. Previous version: 1.0.1-2 Current version: 1.0.1-3 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

On 30 May 2020 at 21:39, Sébastien Villemot wrote: | Control: tags -1 + patch | | Hi Graham, | | Le samedi 30 mai 2020 à 15:09 +0200, Graham Inggs a écrit : | | > I was able to reproduce this in Ubuntu 20.04 on i7-2600 with the | > Rscript -e "example(solve)" | > test case. Rebuilding

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

On 30 May 2020 at 15:09, Graham Inggs wrote: | Hi | | I was able to reproduce this in Ubuntu 20.04 on i7-2600 with the | Rscript -e "example(solve)" | test case. Rebuilding with | export DEB_LDFLAGS_MAINT_STRIP="-Wl,-Bsymbolic-functions" | in debian/rules solved it for me. | | On Sat,

Processed: reassign 961725 to src:openblas ...

Processing commands for cont...@bugs.debian.org: > reassign 961725 src:openblas 0.3.8+ds-1 Bug #961725 [libopenblas-dev] libopenblas-dev: On some cpus, openmp and pthread dead-lock Bug reassigned from package 'libopenblas-dev' to 'src:openblas'. No longer marked as found in versions

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

Control: tags -1 + patch Hi Graham, Le samedi 30 mai 2020 à 15:09 +0200, Graham Inggs a écrit : > I was able to reproduce this in Ubuntu 20.04 on i7-2600 with the > Rscript -e "example(solve)" > test case. Rebuilding with > export DEB_LDFLAGS_MAINT_STRIP="-Wl,-Bsymbolic-functions" > in

Processed: Re: Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

Processing control commands: > tags -1 + patch Bug #961725 [libopenblas-dev] libopenblas-dev: On some cpus, openmp and pthread dead-lock Added tag(s) patch. -- 961725: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=961725 Debian Bug Tracking System Contact ow...@bugs.debian.org with

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

> Just one question: did you try to rebuild it from source without > changing anything? Maybe it’s just the rebuild that fixed it, and not > the flag change. Rebuilt without change: hang with libopenblas0-pthread Rebuilt with USE_TLS=0: hang Rebuilt with USE_SIMPLE_THREADED_LEVEL3=1: hang

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

Hmm, my last reply to this bug seems to have gone astray. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

Hi I was able to reproduce this in Ubuntu 20.04 on i7-2600 with the Rscript -e "example(solve)" test case. Rebuilding with export DEB_LDFLAGS_MAINT_STRIP="-Wl,-Bsymbolic-functions" in debian/rules solved it for me. On Sat, 30 May 2020 at 09:15, Sébastien Villemot wrote: > Just one

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

> Just one question: did you try to rebuild it from source without > changing anything? Maybe it’s just the rebuild that fixed it, and not > the flag change. Rebuilt without change: hang with libopenblas0-pthread Rebuilt with USE_TLS=0: hang Rebuilt with USE_SIMPLE_THREADED_LEVEL3=1: hang

Bug#961879: petsc: binary-all FTBFS

Source: petsc Version: 3.13.1+dfsg1-2 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=petsc=all=3.13.1%2Bdfsg1-2=1590861266=0 ... dh_missing -i dh_missing: warning:

petsc_3.13.1+dfsg1-2_source.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sun, 31 May 2020 00:21:24 +0800 Source: petsc Architecture: source Version: 3.13.1+dfsg1-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Drew Parsons Changes: petsc

Processing of petsc_3.13.1+dfsg1-2_source.changes

petsc_3.13.1+dfsg1-2_source.changes uploaded successfully to localhost along with the files: petsc_3.13.1+dfsg1-2.dsc petsc_3.13.1+dfsg1-2.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list

Processed: severity of 961735 is serious

Processing commands for cont...@bugs.debian.org: > # mumps transition started > severity 961735 serious Bug #961735 [src:siconos] siconos: FTBFS with mumps 5.3.1 Severity set to 'serious' from 'important' > thanks Stopping processing here. Please contact me if you need assistance. -- 961735:

Bug#961708: marked as done (trilinos: FTBFS: #error "At least one of the following host execution spaces must be defined ...")

Your message dated Sat, 30 May 2020 11:33:42 + with message-id and subject line Bug#961708: fixed in trilinos 12.14.1-4 has caused the Debian Bug report #961708, regarding trilinos: FTBFS: #error "At least one of the following host execution spaces must be defined ..." to be marked as done.

trilinos_12.14.1-4_source.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 30 May 2020 11:07:32 + Source: trilinos Architecture: source Version: 12.14.1-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Graham Inggs Closes: 961708 Changes:

Processing of trilinos_12.14.1-4_source.changes

trilinos_12.14.1-4_source.changes uploaded successfully to localhost along with the files: trilinos_12.14.1-4.dsc trilinos_12.14.1-4.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list

Bug#939657: marked as done (libdune-functions-dev is wrongly marked Multi-Arch: foreign)

Your message dated Sat, 30 May 2020 11:03:31 + with message-id and subject line Bug#939657: fixed in dune-functions 2.7.0-1 has caused the Debian Bug report #939657, regarding libdune-functions-dev is wrongly marked Multi-Arch: foreign to be marked as done. This means that you claim that the

dune-functions_2.7.0-1_source.changes ACCEPTED into experimental

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Sat, 30 May 2020 11:43:38 +0200 Source: dune-functions Architecture: source Version: 2.7.0-1 Distribution: experimental Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Ansgar Closes: 939657

Processing of dune-functions_2.7.0-1_source.changes

dune-functions_2.7.0-1_source.changes uploaded successfully to localhost along with the files: dune-functions_2.7.0-1.dsc dune-functions_2.7.0.orig.tar.xz dune-functions_2.7.0-1.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) --

BUSINESS OPPORTUNITY

-- Sir, Again my name is Mr. Lucas Petersen and, I am the Purchasing Manager of a major Pharmaceutical Company in London-United Kingdom. I got your email address from a reliable IFOAM, business portal, in my desperate search for a trustworthy potential partner. I have a proposal that will be of

mumps_5.3.1-2_source.changes ACCEPTED into unstable

Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Sat, 30 May 2020 17:04:20 +0800 Source: mumps Architecture: source Version: 5.3.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Drew Parsons Changes: mumps (5.3.1-2)

Processing of mumps_5.3.1-2_source.changes

mumps_5.3.1-2_source.changes uploaded successfully to localhost along with the files: mumps_5.3.1-2.dsc mumps_5.3.1-2.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list

Processed: Re: Bug#961053: transition: mumps petsc slepc

Processing control commands: > block -1 by 961708 Bug #961053 [release.debian.org] transition: mumps petsc slepc 961053 was blocked by: 961735 961053 was not blocking any bugs. Added blocking bug(s) of 961053: 961708 > tags -1 + confirmed Bug #961053 [release.debian.org] transition: mumps petsc

Bug#961725: libopenblas-dev: On some cpus, openmp and pthread dead-lock

Le samedi 30 mai 2020 à 01:19 +, Mo Zhou a écrit : > Control: tags -1 -moreinfo > > Hi Sébastien, > > Good catch! I tried to remove the mentioned LDFLAG > > DEB_LDFLAGS_MAINT_STRIP="-Wl,-Bsymbolic-functions" > > and rebuilt the openblas 3.8 package. > > Then deadlock issue disappeared.