Bug#852011: marked as done (petsc (libpetsc3.7.4-dev) depends on libgfortran-5-dev)

[Debian Bug Tracking System]

Your message dated Sun, 22 Jan 2017 05:19:21 +
with message-id 
and subject line Bug#852011: fixed in petsc 3.7.5+dfsg1-3
has caused the Debian Bug report #852011,
regarding petsc (libpetsc3.7.4-dev) depends on libgfortran-5-dev
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
852011: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852011
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:petsc
Version: 3.7.5+dfsg1-2
Severity: serious
Tags: sid stretch
User: debian-...@lists.debian.org
Usertags: non-standard-compiler, gcc-5, gcc-5-legacy

petsc (libpetsc3.7.4-dev) depends on libgfortran-5-dev

This package builds with a non standard compiler version; please check
if this package can be built with the default version of gcc/g++, or
with gcc-6/g++-6.

Please keep this report open until the package uses the default
compiler version (or gcc-6) for the package build.

If the package cannot be built anymore, please file a bug report for
ftp.debian.org, asking for the removal of the package.

The severity of this report is likely to be raised before the release,
so that the gcc-5 package can be removed for the release.
--- End Message ---
--- Begin Message ---
Source: petsc
Source-Version: 3.7.5+dfsg1-3

We believe that the bug you reported is fixed in the latest version of
petsc, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 852...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons  (supplier of updated petsc package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sun, 22 Jan 2017 12:13:55 +0800
Source: petsc
Binary: libpetsc3.7-dev libpetsc3.7.5-dev petsc-dev libpetsc3.7.5 
libpetsc3.7.5-dbg petsc3.7.5-doc libpetsc-complex-3.7-dev 
libpetsc-complex-3.7.5-dev libpetsc-complex-3.7.5 libpetsc-complex-3.7.5-dbg
Architecture: source
Version: 3.7.5+dfsg1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libpetsc-complex-3.7-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc-complex-3.7.5 - Shared libraries for version 3.7 of PETSc with 
Complex Numbers
 libpetsc-complex-3.7.5-dbg - Debugging libraries for PETSc
 libpetsc-complex-3.7.5-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc3.7-dev - Static libraries, shared links, header files for PETSc
 libpetsc3.7.5 - Shared libraries for version 3.7 of PETSc
 libpetsc3.7.5-dbg - Debugging libraries for PETSc
 libpetsc3.7.5-dev - Static libraries, shared links, header files for PETSc
 petsc-dev  - Virtual package depending on latest PETSc development package
 petsc3.7.5-doc - Documentation and examples for PETSc
Closes: 852011
Changes:
 petsc (3.7.5+dfsg1-3) unstable; urgency=medium
 .
   * Update libgfortran-5-dev dependency to gfortran to ensure
 the default gfortran (currently 6) is linked to libpetsc*3.7.5-dev.
 Closes: #852011.
Checksums-Sha1:
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petsc_3.7.5+dfsg1-3.debian.tar.xz
Checksums-Sha256:
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petsc_3.7.5+dfsg1-3.dsc
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petsc_3.7.5+dfsg1-3.debian.tar.xz
Files:
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petsc_3.7.5+dfsg1-3_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Sun, 22 Jan 2017 12:13:55 +0800
Source: petsc
Binary: libpetsc3.7-dev libpetsc3.7.5-dev petsc-dev libpetsc3.7.5 
libpetsc3.7.5-dbg petsc3.7.5-doc libpetsc-complex-3.7-dev 
libpetsc-complex-3.7.5-dev libpetsc-complex-3.7.5 libpetsc-complex-3.7.5-dbg
Architecture: source
Version: 3.7.5+dfsg1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Description:
 libpetsc-complex-3.7-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc-complex-3.7.5 - Shared libraries for version 3.7 of PETSc with 
Complex Numbers
 libpetsc-complex-3.7.5-dbg - Debugging libraries for PETSc
 libpetsc-complex-3.7.5-dev - Static libraries, shared links, header files for 
PETSc
 libpetsc3.7-dev - Static libraries, shared links, header files for PETSc
 libpetsc3.7.5 - Shared libraries for version 3.7 of PETSc
 libpetsc3.7.5-dbg - Debugging libraries for PETSc
 libpetsc3.7.5-dev - Static libraries, shared links, header files for PETSc
 petsc-dev  - Virtual package depending on latest PETSc development package
 petsc3.7.5-doc - Documentation and examples for PETSc
Closes: 852011
Changes:
 petsc (3.7.5+dfsg1-3) unstable; urgency=medium
 .
   * Update libgfortran-5-dev dependency to gfortran to ensure
 the default gfortran (currently 6) is linked to libpetsc*3.7.5-dev.
 Closes: #852011.
Checksums-Sha1:
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petsc_3.7.5+dfsg1-3.dsc
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petsc_3.7.5+dfsg1-3.debian.tar.xz
Files:
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Processing of petsc_3.7.5+dfsg1-3_source.changes

[Debian FTP Masters]

petsc_3.7.5+dfsg1-3_source.changes uploaded successfully to localhost
along with the files:
  petsc_3.7.5+dfsg1-3.dsc
  petsc_3.7.5+dfsg1-3.debian.tar.xz

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dolfin is marked for autoremoval from testing

[Debian testing autoremoval watch]

dolfin 2016.2.0-1 is marked for autoremoval from testing on 2017-02-09

It (build-)depends on packages with these RC bugs:
840823: execnet: 
testing/test_gateway.py::TestBasicGateway::test_gateway_status_busy[thread-popen]
 FAILED
848748: blockdiag: FTBFS: E: Build killed with signal TERM after 150 minutes of 
inactivity


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Bug#852011: petsc (libpetsc3.7.4-dev) depends on libgfortran-5-dev

[Drew Parsons]

On Fri, 20 Jan 2017 18:22:01 +0100 Matthias Klose 
wrote:
> 
> The severity of this report is likely to be raised before the
release,
> so that the gcc-5 package can be removed for the release.
> 


"Likely to be raised..." ??  The severity is already serious!

Drew

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caffe-contrib_1.0.0~rc4-1_amd64.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Sun, 22 Jan 2017 02:34:16 +
Source: caffe-contrib
Binary: caffe-cuda caffe-tools-cuda libcaffe-cuda1 libcaffe-cuda-dev 
python3-caffe-cuda
Architecture: source amd64
Version: 1.0.0~rc4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Zhou Mo 
Description:
 caffe-cuda - Fast, open framework for Deep Learning (Meta)
 caffe-tools-cuda - Tools for fast, open framework for Deep Learning (CUDA)
 libcaffe-cuda-dev - development files for Caffe (CUDA)
 libcaffe-cuda1 - library of Caffe, deep leanring framework (CUDA)
 python3-caffe-cuda - Python3 interface of Caffe (CUDA)
Changes:
 caffe-contrib (1.0.0~rc4-1) unstable; urgency=medium
 .
   * New upstream release.
   * Rules: update URL for get-orig-source target.
   * Bump debhelper compat to 10.
   * Patch: add cmake-bump-soversion-to-rc4.patch to fix upstream soversion.
   * Rules: now CAFFE_SOVER is `1.0.0-rc4`.
   * Get rid of symbols control file to avoid endless FTBFS bugs caused
 by symbol changes.
   * Don't miss the pytest target on the dh_auto_test phase.
   * Rules: update LD_LIBRARY_PATH for dh_auto_test.
   * Rules: Remove all `__pycache__` directories on clean.
   * Refresh lintian overrides.
   * Remove patch: 0001-Add-Pascal-to-all-cuda-architectures.patch,
 which is included in this release.
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caffe-contrib_1.0.0~rc4.orig.tar.gz
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caffe-contrib_1.0.0~rc4-1.debian.tar.xz
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caffe-tools-cuda-dbgsym_1.0.0~rc4-1_amd64.deb
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caffe-tools-cuda_1.0.0~rc4-1_amd64.deb
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libcaffe-cuda-dev_1.0.0~rc4-1_amd64.deb
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python3-caffe-cuda_1.0.0~rc4-1_amd64.deb
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libcaffe-cuda-dev_1.0.0~rc4-1_amd64.deb
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python3-caffe-cuda_1.0.0~rc4-1_amd64.deb
Files:
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caffe-contrib_1.0.0~rc4-1.dsc
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caffe-contrib_1.0.0~rc4.orig.tar.gz
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caffe-contrib_1.0.0~rc4-1.debian.tar.xz
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caffe-contrib_1.0.0~rc4-1_amd64.buildinfo
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caffe-cuda_1.0.0~rc4-1_amd64.deb
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caffe-tools-cuda-dbgsym_1.0.0~rc4-1_amd64.deb
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caffe-tools-cuda_1.0.0~rc4-1_amd64.deb
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libcaffe-cuda-dev_1.0.0~rc4-1_amd64.deb
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libcaffe-cuda1-dbgsym_1.0.0~rc4-1_amd64.deb
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Processing of caffe-contrib_1.0.0~rc4-1_amd64.changes

[Debian FTP Masters]

caffe-contrib_1.0.0~rc4-1_amd64.changes uploaded successfully to localhost
along with the files:
  caffe-contrib_1.0.0~rc4-1.dsc
  caffe-contrib_1.0.0~rc4.orig.tar.gz
  caffe-contrib_1.0.0~rc4-1.debian.tar.xz
  caffe-contrib_1.0.0~rc4-1_amd64.buildinfo
  caffe-cuda_1.0.0~rc4-1_amd64.deb
  caffe-tools-cuda-dbgsym_1.0.0~rc4-1_amd64.deb
  caffe-tools-cuda_1.0.0~rc4-1_amd64.deb
  libcaffe-cuda-dev_1.0.0~rc4-1_amd64.deb
  libcaffe-cuda1-dbgsym_1.0.0~rc4-1_amd64.deb
  libcaffe-cuda1_1.0.0~rc4-1_amd64.deb
  python3-caffe-cuda-dbgsym_1.0.0~rc4-1_amd64.deb
  python3-caffe-cuda_1.0.0~rc4-1_amd64.deb

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Processed: theano: single GradientError and WrongValues in tests on s390x, ppc64 and sparc

[Debian Bug Tracking System]

Processing control commands:

> severity -1 serious
Bug #831541 [src:theano] theano: single GradientError and WrongValues in tests 
on s390x, ppc64 and sparc
Severity set to 'serious' from 'normal'

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Bug#831541: theano: single GradientError and WrongValues in tests on s390x, ppc64 and sparc

[Daniel Stender]

Control: severity -1 serious

The build time tests for s390x are temporarily failsafed to workaround this, but
this must be solved before the release.

DS

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Processed: theano: assertion error in test_fit_int64 on i386 and hurd/kreebsd-i386

[Debian Bug Tracking System]

Processing control commands:

> severity -1 serious
Bug #831540 [src:theano] theano: assertion error in test_fit_int64 on i386 and 
hurd/kreebsd-i386
Severity set to 'serious' from 'normal'

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Bug#831540: theano: assertion error in test_fit_int64 on i386 and hurd/kreebsd-i386

[Daniel Stender]

Control: severity -1 serious

The build time tests are temporarily failsafed on i386 to workaround this, but 
that must
be solved for the release.

DS

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r-cran-uuid 0.1.2-8 MIGRATED to testing

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FYI: The status of the r-cran-uuid source package
in Debian's testing distribution has changed.

  Previous version: 0.1.2-7
  Current version:  0.1.2-8

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libcgns 3.3.0-4 MIGRATED to testing

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FYI: The status of the libcgns source package
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  Previous version: 3.3.0-3
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r-cran-r6 2.2.0-2 MIGRATED to testing

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libfolia 1.6-2 MIGRATED to testing

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FYI: The status of the libfolia source package
in Debian's testing distribution has changed.

  Previous version: 1.5-1
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Processed: notfixed 819604 in 1.5-2, fixed 819604 in 1.5.1-1, reassign 848234 to winrm ..., affects 848234

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> notfixed 819604 1.5-2
Bug #819604 {Done: Scott Howard } [arduino-mk] 
arduino-mk: Broken with latest pyserial
No longer marked as fixed in versions 1.5-2.
> fixed 819604 1.5.1-1
Bug #819604 {Done: Scott Howard } [arduino-mk] 
arduino-mk: Broken with latest pyserial
Marked as fixed in versions arduino-mk/1.5.1-1.
> reassign 848234 winrm 0.0~git20160323.0752679-1
Bug #848234 {Done: Daniel Stender } [txwinrm,winrm] 
txwinrm,winrm: error when trying to install together
Bug reassigned from package 'txwinrm,winrm' to 'winrm'.
No longer marked as found in versions 
golang-github-masterzen-winrm/0.0~git20160323.0752679-1 and txwinrm/1.1.28-1.
No longer marked as fixed in versions 
golang-github-masterzen-winrm/0.0~git20160323.0752679-2.
Bug #848234 {Done: Daniel Stender } [winrm] txwinrm,winrm: 
error when trying to install together
Marked as found in versions 
golang-github-masterzen-winrm/0.0~git20160323.0752679-1.
> fixed 848234 0.0~git20160323.0752679-2
Bug #848234 {Done: Daniel Stender } [winrm] txwinrm,winrm: 
error when trying to install together
Marked as fixed in versions 
golang-github-masterzen-winrm/0.0~git20160323.0752679-2.
> affects 848234 + txwinrm
Bug #848234 {Done: Daniel Stender } [winrm] txwinrm,winrm: 
error when trying to install together
Added indication that 848234 affects txwinrm
> thanks
Stopping processing here.

Please contact me if you need assistance.
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819604: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=819604
848234: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=848234
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Processing of fiat_2016.2.0-2_amd64.changes

[Debian FTP Masters]

/fiat_2016.2.0-2_amd64.changes couldn't be processed for 48 hours and is now 
deleted
All files it mentions are also removed:
  fiat_2016.2.0-2.dsc, fiat_2016.2.0-2.debian.tar.xz, 
fiat_2016.2.0-2_amd64.buildinfo, python-fiat_2016.2.0-2_all.deb, 
python3-fiat_2016.2.0-2_all.deb

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Re: <>

[Hana Almonte]

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caffe_1.0.0~rc4-1_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

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Hash: SHA256

Format: 1.8
Date: Sat, 21 Jan 2017 11:26:37 +
Source: caffe
Binary: caffe-cpu caffe-tools-cpu libcaffe-cpu1 libcaffe-cpu-dev 
python3-caffe-cpu caffe-doc
Architecture: source
Version: 1.0.0~rc4-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Zhou Mo 
Description:
 caffe-cpu  - Fast, open framework for Deep Learning (Meta)
 caffe-doc  - Caffe's doxygen docs and examples
 caffe-tools-cpu - Tools for fast, open framework for Deep Learning (CPU_ONLY)
 libcaffe-cpu-dev - development files for Caffe (CPU_ONLY)
 libcaffe-cpu1 - library of Caffe, deep learning framework (CPU_ONLY)
 python3-caffe-cpu - Python3 interface of Caffe (CPU_ONLY)
Changes:
 caffe (1.0.0~rc4-1) unstable; urgency=medium
 .
   * New upstream release.
   * Update URL for get-orig-source target in rules.
   * Bump debhelper compat to 10.
   * Patch: add cmake-bump-soversion-to-rc4.patch to fix upstream soversion.
   * Rules: CAFFE_SOVER is `1.0.0-rc4` now.
   * Get rid of symbols control files to avoid endless FTBFS bugs caused
 by symbols change of C++ shared library.
   * Add the missing pytest target in override_dh_auto_test-arch.
   * Update LD_LIBRARY_PATH for dh_auto_test.
   * Rules: patch refman.tex before compiling to avoid pdflatex error.
   * Rules: remove all __pycache__ directories on clean.
   * Refresh lintian overrides.
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 9705ada2e21069710ad9515b9784aaf8 8505257 science optional 
caffe_1.0.0~rc4.orig.tar.gz
 a7cc6e52f06a1f984fcedb85f03583a2 15436 science optional 
caffe_1.0.0~rc4-1.debian.tar.xz

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Thank you for your contribution to Debian.

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Processing of caffe_1.0.0~rc4-1_source.changes

[Debian FTP Masters]

caffe_1.0.0~rc4-1_source.changes uploaded successfully to localhost
along with the files:
  caffe_1.0.0~rc4-1.dsc
  caffe_1.0.0~rc4.orig.tar.gz
  caffe_1.0.0~rc4-1.debian.tar.xz

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Processed: severity of 852049-51 is wishlist

[Debian Bug Tracking System]

Processing commands for cont...@bugs.debian.org:

> severity 852049 wishlist
Bug #852049 [afl] afl: captures build path (doesn't build reproducible)
Severity set to 'wishlist' from 'important'
> severity 852050 wishlist
Bug #852050 [src:c-blosc] c-blosc: captures build path (doesn't build 
reproducible)
Severity set to 'wishlist' from 'important'
> severity 852051 wishlist
Bug #852051 [src:libvigraimpex] libvigraimpex: captures build path (doesn't 
build reproducible)
Severity set to 'wishlist' from 'important'
> # let's not inflate severities, even if we find those features
> # "important"
> # (also if we/you maintain these packages yourself…)
> thanks
Stopping processing here.

Please contact me if you need assistance.
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852050: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852050
852051: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=852051
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Bug#851162: Still unresolved upstream, help needed

[Ghislain Vaillant]

Cc'd to debian-powerpc

On Fri, 13 Jan 2017 10:17:18 + Ghislain Vaillant 
 wrote:

control: forwarded -1 https://github.com/h5py/h5py/issues/817


Upstream is running out of ideas, so any help from the team would be 
warmly welcome.


Cheers,
Ghis

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