Package: wnpp
Severity: wishlist
Subject: ITP: python-srsly -- modern high-performance serialization utilities
for Python3
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-srsly
Version : 2.4.5.dev1
Upstream Author : ExplosionAI UG
* URL
Hi Thorsten
> please mention all files licensed under the MIT license and provide
> unminified files.
I have removed the affected documentation in the new upload.
Thanks for the speedy checking to support the BioConductor migration
Andreas.
--
http://fam-tille.de
Hi Thorsten,
Am Sun, Nov 27, 2022 at 07:00:10PM + schrieb Thorsten Alteholz:
> please mention all files licensed under the MIT license and provide
> unminified files.
> (the reason for the override does not apply to all lintian warnings)
I have removed the affected files in a new upload.
Hi Thorsten,
Am Sun, Nov 27, 2022 at 07:00:10PM + schrieb Thorsten Alteholz:
> please mention all files licensed under the MIT license and provide
> unminified files.
> (the reason for the override does not apply to all lintian warnings)
I've removed the affected files from the upstream
Package: wnpp
Severity: wishlist
Subject: ITP: python-rich-click -- creating beautiful command line interfaces
for Python3
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-rich-click
Version : 1.5.2
Upstream Author : Phil Ewels
* URL
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian-med
Subject: ITP: muscle3 -- multiple alignment program of protein sequences
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: muscle3
Version : 3.8.1551
Upstream Author : Copyright: © Robert C. Edgar &quo
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-ggrastr -- Bioconductor rasterize layers for 'ggplot2'
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-ggrastr
Version : 1.0.1
Upstream Author : Viktor Petukhov,
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-biocbaseutils -- General utility functions for developing
Bioconductor packages
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-bioc-biocbaseutils
Version : 1.0.0
Upstream Author : Marcel Ramos,
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-dss -- Bioconductor dispersion shrinkage for sequencing
data
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-bioc-dss
Version : 2.46.0
Upstream Author : Hao Wu, Hao Feng
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-bsseq -- Bioconductor analyze, manage and store bisulfite
sequencing data
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-bioc-bsseq
Version : 1.34.0
Upstream Author : Kasper Daniel Hansen,
* URL
Am Wed, Nov 16, 2022 at 08:25:29PM +0100 schrieb Étienne Mollier:
> ModuleNotFoundError: No module named 'bp._bp'
>
> looks to be caused by python3-iow not being built for python3.11
> yet:
>
> $ python3.10 -c 'import bp' ; echo $?
> 0
>
> $ python3.11 -c 'import bp' ;
Hi,
Am Thu, Oct 21, 2021 at 01:25:52AM +0530 schrieb Nilesh Patra:
> I currently have no interest in maintaining unifrac, which
> is a bit cumbersome to maintain (the new update being an example)
> and it doesn't motivate me enough to keep maintaining it.
>
> Should you feel motivated, feel free
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-clock -- GNU R date-time types and tools
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-clock
Version : 0.6.1
Upstream Author : Davis Vaughan, RStudio
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-spatstat.model -- GNU R parametric statistical modelling
for the 'spatstat' family
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-spatstat.model
Version : 3.0
Upstream Author : Adrian Baddeley
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-spatstat.explore -- GNU R exploratory data analysis for
the 'spatstat' family
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-spatstat.explore
Version : 3.0
Upstream Author : Adrian Baddeley
Package: wnpp
Severity: wishlist
Subject: ITP: python-prefixed -- alternative implementation of the Python3
built-in float
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-prefixed
Version : 0.4.1
Upstream Author : Avram Lubkin
* URL
Package: wnpp
Severity: normal
X-Debbugs-Cc: Ben Westover , Nilesh Patra
, Stefan Ahlers
Control: affects -1 src:libquazip
I intend to orphan the libquazip package.
The package description is:
QuaZIP is a simple C++ wrapper over Gilles Vollant's ZIP/UNZIP package that
can be used to access
Package: wnpp
Severity: wishlist
Subject: ITP: snippy -- rapid haploid variant calling and core genome alignment
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: snippy
Version : 4.6.0
Upstream Author : Torsten Seemann
* URL : https://github.com
Package: wnpp
Severity: wishlist
Subject: ITP: any2fasta -- convert various sequence formats to FASTA
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: any2fasta
Version : 0.4.2
Upstream Author : Torsten Seemann
* URL : https://github.com/tseemann
Am Sun, Oct 30, 2022 at 09:09:55AM +0530 schrieb Nilesh Patra:
> > >>> I understand that, let's take it away from Debian Med and put it in
> > >>> Debian at
> > >>> large. Ben, if you would do the update, then I'd go over it and upload
> > >>> it. That
> > >>> would be very good.
>
> If you
Hi Thorsten,
Am Fri, Oct 28, 2022 at 06:00:09PM + schrieb Thorsten Alteholz:
> according to FHS big data files should not be in /usr/lib. Please move them
> somewhere else.
Fixed in new upload. I might like to add that this package helps for
COVID-19 investigation. Fast processing after a
Package: wnpp
Severity: wishlist
Subject: ITP: libomp-jonathonl -- parallel programming library
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: libomp-jonathonl
Version : 0.0+git20211216.5228495
Upstream Author : Jonathon LeFaive
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-sftime -- GNU R support for simple feature objects that
have a time column
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-sftime
Version : 0.2
Upstream Author : Henning Teickner
* URL
Hi Thorsten,
Am Sun, Oct 16, 2022 at 06:00:10PM + schrieb Thorsten Alteholz:
> as the license of this software is only GPL-3, please remove the term "or (at
> your option) any later version. " from your debian/copyright.
Fixed in new upload, thanks a lot for thorough checking
Andreas.
Package: wnpp
Severity: wishlist
Subject: ITP: savvy -- conversion tool for SAV file format
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: savvy
Version : 2.1.0
Upstream Author : xx-20yy FIXME
* URL : https://github.com/statgen/savvy
* License
Hi Thorsten,
Am Sun, Oct 09, 2022 at 06:08:57PM + schrieb Thorsten Alteholz:
> according to meson.build and LICENSE, the license of this package is only
> GPL-3.
> According to LICENSE the only copyright holder is British Columbia Cancer
> Agency Branch.
Fixed in new upload, thanks for
Package: wnpp
Severity: wishlist
Subject: ITP: python-iow -- balanced parentheses tree structure
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-iow
Version : 1.0.5
Upstream Author : Daniel McDonald
* URL : https://github.com/biocore
Package: wnpp
Severity: wishlist
Subject: ITP: libbitarray -- library for bit arrays
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: libbitarray
Version : 2.0
Upstream Author : Isaac Turner
* URL : https://github.com/noporpoise/BitArray
Package: wnpp
Severity: wishlist
Subject: ITP: btllib -- Bioinformatics Technology Lab common code library
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: btllib
Version : 1.4.9
Upstream Author : Vladimir Nikolić, Parham Kazemi, Murathan Goktas, Lauren
Hi Andrius,
Am Tue, Oct 04, 2022 at 10:38:01AM +0300 schrieb Andrius Merkys:
> On 2022-10-03 18:32, Andreas Tille wrote:
> > My main motivation to start ntcard and twopaco packages was to avoid
> > code duplication in pufferfish. I admit it seems I faild in doing this
> &g
Hi Andrius,
Am Mon, Oct 03, 2022 at 10:19:41AM +0300 schrieb Andrius Merkys:
> twopaco has entered testing (yay!), thus I gave its reverse dependency,
> pufferfish (ITP bug #944785), a look. pufferfish carries embedded copies
> of twopaco and ntcard with a modified build system to create static
Package: wnpp
Severity: wishlist
Subject: ITP: libshrinkwrap -- XZ streambuf with std::istream
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: libshrinkwrap
Version : 1.2.0
Upstream Author : Jonathon LeFaive
* URL : https://github.com/jonathonl
Package: wnpp
Severity: wishlist
Subject: ITP: ska -- Split Kmer Analysis
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: ska
Version : 1.0
Upstream Author : Simon Harris (Wellcome Sanger Institute)
* URL : https://github.com/simonrharris/SKA
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-optimparallel -- parallel version of the L-BFGS-B
optimization method
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-optimparallel
Version : 1.0
Upstream Author : Florian Gerber
* URL
Hi,
Am Mon, Sep 12, 2022 at 08:08:40PM +0200 schrieb Filippo Rusconi:
> > Thank you for the offer, but the package was just sponsored yesterday by
> > Adam Borowski (kilobyte) and is in the NEW queue. If you're interested
> > in QuaZip for Qt5, I could package that for you to review.
>
> Well,
Hi Aaron,
the Debian R packaging team intends to package basilisk for Debian. In
Debian the ftpmaster team has the role to verify licenses and copyright
of new software. The team member who was checking my upload considers
the files in
inst/example/inst/test_dummy
as differently licensed
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-estimatr -- GNU R fast estimators for design-based
inference
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-estimatr
Version : 1.0.0
Upstream Author : Graeme Blair,
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-dendsort -- GNU R Modular Leaf Ordering Methods for
Dendrogram Nodes
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-dendsort
Version : 0.3.4
Upstream Author : Ryo Sakai,
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-poorman -- Üoor Man's sependency free recreation of
'dplyr' GNU R package
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-poorman
Version : 0.2.5
Upstream Author : Nathan Eastwood
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: python-tuspy -- Python3 client for the tus resumable upload
protocol
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-tuspy
Version : 1.0.0
Upstream Author : Ifedapo .A. Olarewaju
* URL
Hi folks,
before I follow the advise how to refer a question to the CTTE[1] I'm
wondering whether licensing questions are also a topic here. I admit
I'm a bit unsure whether this minor issue about a license is really
worth that even more people spent time into it. I'm demotivated myself
by no
Hi Thorsten,
Am Sat, Jul 30, 2022 at 07:06:38PM + schrieb Thorsten Alteholz:
> please also mention profvis/inst/htmlwidgets/lib/profvis/scroll.js in your
> debian/copyright.
Fixed in new upload.
Thanks a lot for thorough checking
Andreas.
--
http://fam-tille.de
Hi Thorsten,
Am Sat, Jul 30, 2022 at 07:06:38PM + schrieb Thorsten Alteholz:
> please also mention the GPL-2 of urlchecker/inst/tools/urltools.R in your
> debian/copyright.
I've added an extra paragraph to d/copyright. However, IMHO there is no
real point for a reject here since the "or
Hi Thorsten,
Am Sat, Jul 30, 2022 at 06:00:08PM + schrieb Thorsten Alteholz:
> please also mention at least Aidan Feldman in your debian/copyright.
Fixed in new upload - thanks for checking
Andreas.
--
http://fam-tille.de
Package: wnpp
Severity: wishlist
Subject: ITP: unifrac-tools -- high-performance phylogenetic diversity
calculations (binaries)
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: unifrac-tools
Version : 1.1.1
Upstream Author : UniFrac development team.
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-profvis -- interactive visualizations for profiling GNU R
code
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-profvis
Version : 0.3.7
Upstream Author : Winston Chang,
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-urlchecker -- run CRAN URL checks from older GNU R versions
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-urlchecker
Version : 1.0.1
Upstream Author : R Core team (The code in urltools.R adapted
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-fontawesome -- GNU R support of 'Font Awesome' Icons
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-fontawesome
Version : 0.2.2
Upstream Author : Richard Iannone,
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-brglm2 -- GNU R bias reduction in generalized linear models
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-brglm2
Version : 0.8.2
Upstream Author : Ioannis Kosmidis,
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-enrichwith -- GNU R methods to enrich R Objects with extra
components
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-enrichwith
Version : 0.3.1
Upstream Author : Ioannis Kosmidis
* URL
Hi Paul,
Am Fri, Jun 17, 2022 at 01:49:39PM +0800 schrieb Paul Wise:
> I note that Debian bookworm does not currently have live images at all,
> so I would suggest that issue needs solving before blends live images,
> you might want to discuss the issue on the debian-live mailing list.
>
> Once
Hi Thorsten,
Am Tue, May 24, 2022 at 06:00:08PM + schrieb Thorsten Alteholz:
> please also mention the Expat license, a BSD license and whatever license is
> missing.
I've added the missing licenses.
> While you are at it, please also mention the GPL-2+ license of igraph. I
> wonder
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-prevalence -- GNU R tools for prevalence assessment studies
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-prevalence
Version : 0.4.0
Upstream Author : Brecht Devleesschauwer, Paul Torgerson
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-metadat -- GNU R meta-analysis datasets
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-metadat
Version : 1.2
Upstream Author : Thomas White,
* URL : https://cran.r-project.org/package
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-multiplex -- GNU R Algebraic Tools for the Analysis of
Multiple Social Networks
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-multiplex
Version : 2.9.8
Upstream Author : Antonio Rivero Ostoic
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-rcppml -- GNU R Rcpp Machine Learning Library
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-rcppml
Version : 0.3.7
Upstream Author : Zachary DeBruine
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-leidenbase -- GNU R and C/C++ Wrappers to Run the Leiden
find_partition() Function
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-leidenbase
Version : 0.1.11
Upstream Author : Brent Ewing,
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-decoupler -- infer biological activities from omics data
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-bioc-decoupler
Version : 2.2.0
Upstream Author : Pau Badia-i-Mompel,
* URL : https
Hi Thorsten,
Am Thu, May 12, 2022 at 06:00:08PM + schrieb Thorsten Alteholz:
> README.md says "README.md is generated from README.Rmd. Please edit that
> file."
> So please add README.Rmd to debian/missing-sources and add a comment how to
> generate README.md
I have re-uploaded the
Hi Nilesh,
Am Wed, Apr 27, 2022 at 07:26:04PM +0530 schrieb Nilesh Patra:
> > Thanks a lot for your help on this (deserves another $drink from me ;-) )
>
> This count is increasing with each passing day :)
Just giving honor to those whom deserve honor. ;-)
> > I tried to repack[2] but I get
>
Hi Nilesh,
Am Wed, Apr 27, 2022 at 04:30:40PM +0530 schrieb Nilesh Patra:
> On Wed, Apr 27, 2022 at 10:59:25AM +0200, Andreas Tille wrote:
> > ── Error (test-theme-base-colors.R:45:3): bs3 base colors
> > ──
> > Error in `compile_data(sass_input, options)
Thu, Apr 14, 2022 at 04:50:38PM +0200 schrieb Andreas Tille:
> Hi,
>
> Am Thu, Apr 14, 2022 at 11:26:58AM +0200 schrieb Andreas Tille:
> > I did a next step in
> >
> >
> > https://salsa.debian.org/r-pkg-team/r-cran-bslib/-/commit/7d066e14383753156d851e81b0db
Am Thu, Apr 21, 2022 at 12:32:29AM +0530 schrieb Nilesh Patra:
> If you want to check ftp master's views, please uploade sooner (than later)
Its ready except for bs5. I'm tempted to remove this functionality (at the
beginning of next week if nobody beats me).
Kind regards
Andreas.
--
Hi,
Am Wed, Apr 20, 2022 at 11:13:07PM +0530 schrieb Nilesh Patra:
> On Fri, Apr 15, 2022 at 01:24:31PM -0400, Eric Brown wrote:
> > I have gone ahead and opened RFP bugs for the fonts which are not in Debian
> > but needed by r-cran-bslib (referred to by Nilesh above).
>
> Thank you very much
l have open licences):
> >
> > Nunito Sans https://github.com/googlefonts/NunitoSans
> > Inter https://github.com/rsms/inter/
> > News Cycle https://launchpad.net/newscycle
> > Neucha https://typetype.org/wp-content/uploads/neucha.zip
> >
>
Am Thu, Apr 14, 2022 at 07:51:05AM -0700 schrieb Carson Sievert:
> Sorry, but come of think of it, even if we do upgrade, it won't change the
> fact that we apply patches to the SCSS source code for BS4 and BS5 (to fix
> bugs and add features). Technically you'll probably be fine replacing
>
Hi,
Am Thu, Apr 14, 2022 at 11:26:58AM +0200 schrieb Andreas Tille:
> I did a next step in
>
>
> https://salsa.debian.org/r-pkg-team/r-cran-bslib/-/commit/7d066e14383753156d851e81b0db9e21665ce861
>
>
> where I simply try the patience of ftpmaster to accept binary
Am Wed, Feb 23, 2022 at 01:52:26PM +0530 schrieb Nilesh Patra:
>
> This was what I was fearing.
> I need to admit that this is a 'gigantic' waste of everyone's time to be
> doing this.
Yes.
> Even if we give out sources It looks * very * unlikely for someone to edit
> this in what is a part
Hi Nilesh,
Am Wed, Feb 23, 2022 at 12:24:41PM +0530 schrieb Nilesh Patra:
> bslib is needed for the new rmarkdown update, and it is being used in other
> packages
> in the ecosystem as well, as it seems.
Thanks a lot for working on this!
> When I looked at the source, it comes with a few
Control: tags -1 upstream
Control: forwarded -1 https://github.com/rstudio/bslib/issues/412
files. This might require a step to derive the
> > .woff wiles in the format expected by bslib.
> >
> >
> > On Tue, Apr 5, 2022 at 9:44 AM Andreas Tille wrote:
> > >
> > > Hi Eric,
> > >
> > > Am Mon, Apr 04, 2022 at 06:42:59AM -0400 schr
Hi Eric,
Am Mon, Apr 04, 2022 at 06:42:59AM -0400 schrieb Eric Brown:
> To update, I found that a few more are packaged in texlive-fonts-extra (
> https://packages.debian.org/buster/texlive-fonts-extra)
>
> Roboto https://packages.debian.org/bullseye/fonts-roboto
> Ubuntu
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-flextable -- GNU R functions for tabular reporting
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-flextable
Version : 0.7.0
Upstream Author : David Gohel,
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-officer -- GNU R manipulation of Microsoft Word and
PowerPoint documents
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-officer
Version : 0.4.2
Upstream Author : David Gohel,
* URL
Am Thu, Mar 24, 2022 at 06:39:22PM +0100 schrieb Michael Crusoe:
> That's great news, please go for it!
... as always. If you fix something, just upload.
Thanks a lot, Andreas.
--
http://fam-tille.de
Package: wnpp
Severity: wishlist
Subject: ITP: python-catalogue -- super lightweight function registries for
Python3 libraries
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: python-catalogue
Version : 2.0.6
Upstream Author : ExplosionAI UG
* URL
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: Anastasiia Iurshina ,
debian-science-maintain...@lists.alioth.debian.org
Subject: ITP: wasabi -- lightweight console printing and formatting toolkit for
Python3
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: wasabi
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-hardhat -- GNUR R construct modeling packages
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-hardhat
Version : 0.2.0
Upstream Author : Davis Vaughan,
* URL : https://cran.r
Hi Steffen,
I'd like to express that my reading of the file is different from
Thorsten and I insist on the interpretation I gave in the ITP bug
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=991859#42
I will stop trying to push this package to new.
Kind regards
Andreas.
Am Sat,
Hi Thorsten,
Am Wed, Feb 23, 2022 at 04:00:08PM + schrieb Thorsten Alteholz:
> please also mention the MIT license of the test-dummy package.
Sorry but I disagree here. Its true that the file
inst/example/inst/test_dummy/setup.py
contains the string
license='MIT',
However, this is
Hi Thorsten,
Am Wed, Feb 23, 2022 at 04:00:08PM + schrieb Thorsten Alteholz:
> please mention the CC0 license of Hedlex in your debian/copyright.
I've rather removed the code copy in favour of the Debian
packaged nlohmann-json3-dev and re-uploaded.
Thanks for thorough checking
Hi Thorsten,
Am Wed, Feb 23, 2022 at 04:00:08PM + schrieb Thorsten Alteholz:
> please also mention the GPL and the LPPL in your debian/coypright.
Thanks for checking. I've added GPL and removed copies of style
files that are provided by texlive packages.
Please note that this package is a
Hi Thorsten,
Am Mon, Feb 21, 2022 at 04:00:08PM + schrieb Thorsten Alteholz:
> according to DESCIRPTION the license of this software is MIT, which you put
> in your debian/copyright.
> According to README.me the license is GPL-3+.
> As README.me is newer than DESCRIPTION, I think your entry
Package: wnpp
Severity: wishlist
Subject: ITP: twopaco -- build the compacted de Bruijn graph from many complete
genomes
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: twopaco
Version : 0.9.4
Upstream Author : I. Minkin and P. Medvedev.
* URL
Hi Thorsten,
Am Sat, Feb 19, 2022 at 11:00:09AM + schrieb Thorsten Alteholz:
> please also mention progeny/**/ProgenySingleCell.Rmd in your debian/copyright.
This is fixed in new upload.
Thanks for thorough checking
Andreas.
--
http://fam-tille.de
Hi Thorsten
> according to the file header, the license of this software is not GPL.
> Maybe upstream can clarify his wishes.
As you can see in the ITP bug log[1] upstream confirmed that he really
intended the license as it is specified in the single files in R/* and
thus I adjusted d/copyright
Am Fri, Feb 18, 2022 at 10:03:02PM +0200 schrieb Adrian Dușa:
>
> Yes this is pretty unusual and I would have probably spent decades of R
> programming without realising the description file does not cover the code,
> had that incident didn't happened.
Thanks for confirming.
> Alright then,
just pretty unusual and
thus I was asking whether it is intentional or just a mistake.
Thanks a lot for your quick response
Andreas.
> Best,
> Adrian
>
> On Fri, 18 Feb 2022 at 14:42, Andreas Tille wrote:
>
> > Hi Adrian,
> >
> > I intend
Hi Adrian,
I intend to package amisc for Debian.
Inside the DESCRIPTION file of admisc I find:
License: GPL (>= 3)
but according to the file headers, the license of this software is not GPL
but BSD-3-clause:
$ head -n24 R/asNumeric.R
# Copyright (c) 2019 - 2022, Adrian Dusa
# All rights
Control: tags -1 pending
I've replaced Nilesh's ID by my own in Git. Pending fixing
the build before I'll upload.
Kind regards
Andreas.
--
http://fam-tille.de
Package: wnpp
Severity: wishlist
Subject: ITP: golang-github-apptainer-container-library-client -- Golang client
for Apptainer container library (library)
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: golang-github-apptainer-container-library-client
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian...@lists.debian.org
Subject: ITP: golang-github-apptainer-container-key-client -- Go client for
Apptainer key storage and retrieval using HKP (library)
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: golang-github
Hi Thorsten,
Am Wed, Feb 16, 2022 at 07:00:08PM + schrieb Thorsten Alteholz:
> our hardworking trainees added to note to your package:
Kudos to the trainees!
> pangoLEARN\data\decisionTreeHeaders_v1.joblib seems to be binary.
> Same for pangoLEARN\data\decisionTree_v1.joblib.
>
> So,
Package: wnpp
Severity: wishlist
Subject: ITP: golang-github-sebdah-goldie -- Golden file testing for Go
(library)
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: golang-github-sebdah-goldie
Version : 2.5.3
Upstream Author : Sebastian Dahlgren
* URL
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian...@lists.debian.org
Subject: ITP: golang-github-apptainer-sif -- development files for Singularity
Image Format (SIF)
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: golang-github-apptainer-sif
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian...@lists.debian.org
Subject: ITP: --
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name:
Version :
Upstream Author :
* URL :
* License :
Programming Lang: (C, C++, C#, Perl
Package: wnpp
Severity: wishlist
Subject: ITP: golang-mvdan-sh -- shell parser, formatter, and interpreter with
bash support; includes shfmt
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: golang-mvdan-sh
Version : 3.4.2
Upstream Author : Daniel Martí
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-spatstat.random -- GNU R random generation functionality
for the 'spatstat' family
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-spatstat.random
Version : 2.1
Upstream Author : Adrian Baddeley
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-qqconf -- GNU R creates simultaneous testing bands for
QQ-plots
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-qqconf
Version : 1.1.1
Upstream Author : Eric Weine,
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-startupmsg -- GNU R utilities for start-up messages
Package: wnpp
Owner: Andreas Tille
Severity: wishlist
* Package name: r-cran-startupmsg
Version : 0.9.6
Upstream Author : Peter Ruckdeschel
* URL : https
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