Hi Nikita
you need to give us more information if we are to help you. What was thec
command line? What was the output of the command other than the error
message? What version of FS and what version of Linux?
cheers
Bruce
On Tue, 23 Sep 2014, Nikita Zhitkevich wrote:
Hi,
I am currently
Hi,
I am currently running Freesurfer on Linux and while trying to test it out on
the bert subject I received the error message:
ERROR: A segfault has occurred. This is not your fault, but is most likely an
unrecoverable error and has made the program unstable. Please send the contents
of the
Jace,
If your system auto-updated to XQuartz v2.7.6, which might have happened
within the past couple weeks, then you should install v2.7.5 instead, as
it seems that another Freesurfer user was able to get tkmedit working
again on OSX 10.7.5 after reverting to v2.7.5.
N.
On Wed, 2014-06-18 at
Hello,
I am running into a segfault error when trying to use tkmedit or tksufer.
I am currently running OSX 10.7.5 and have the most current version of XQuartz
installed.
Below are the contents of the .xdebug files:
.xdebug_tkmedit:
tkmedit started: Wed Jun 18 10:58:41 2014
Hello,
Can you please email me the contents of your
/Application/freesurfer/build-stamp.txt file?
And also what version of OSX you are running by typing sw_vers
(without quotes) on the command line?
-Zeke
On 06/18/2014 01:02 PM, Jace Bradford King wrote:
Hello,
I am running into a
Hi, Rune and Zeke
I have posted some time ago my experience with VirtualBox. I also got
similar segfaults. The only way I could run FreeSurfer without problems
was installing CentOS64 on a second hard disk so I have a dual boot
system and skipped VirtualBox. Freesurfer 5.3 also solved some
I support what Marcos found. Freesurfer does not work on CentOS in
VirtualBox because of the 3D error in the VirtualBox driver for graphics
under CentOS. I solved the problem by using Vmware player instead. It seems
more mature in the 3D driver.
If others would like to use freesurfer on a
mri_convert just starts the man page for mri_convert.
I have been looking at other things and 3D view in FSL also crashes with a
2657 segmentation fault and a core dump. I think the problem is in the
virtualized 3D driver or something like that.
It seems that CentOS 6.4 does have some problems
I have just installed Freesurfer and wanted to try tkmedit
I get a Segfault error and it asked me to write to this mail.
The .xdebug_tkmedit is
tkmedit started: Wed Jul 10 10:53:23 2013
/usr/local/freesurfer/tktools/tkmedit.bin
$Id: tkmedit.c,v 1.343 2011/03/01 01:41:22 nicks Exp $ $Name:
Rune,
I have not seen this error before. Can you please type mri_convert on
the command line and tell me what, if any, output is produced.
-Zeke
On 07/10/2013 05:14 AM, Rune Frandsen wrote:
I have just installed Freesurfer and wanted to try tkmedit
I get a Segfault error and it asked me to
Dear Freesurfer users and developers,
I sent a message to you yesterday (unable to download FS). The matter
is that I have got segfault error after reinstallation of ati
videocard driver. First of all I would like to say that I am a newbie in
FS and the last thing i want to do is to disturb
Hello all,
I am hoping that somebody may be able to help me out with this problem. I am
new to freesurfer so please excuse if this is a newbie question.
I have run recon-all on my subjects to create the appropriate .mgz files needed
for analysis, but now when I try and view these files
Hi Ben,
we need to know more. Can you send the command line, version #, OS,
hardware, etc?
thanks,
Bruce
On Mon, 20 Oct 2008, Wilson, Benjamin wrote:
Hello all,
I am hoping that somebody may be able to help me out with this problem. I am
new to freesurfer so please excuse if this is
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