Thanks Doug,
Just to double check I understand you correctly, where the output says #
Measure Cortex, WhiteSurfArea, White Surface Total Area this is now the
surface area of the pial surface even though it is labeled White?
Cheers,
Will
On Sat, Sep 13, 2014 at 3:27 AM, Douglas N Greve
hi freesurfers,
i would like to use an empirically derived HRF with mkanalysis-sess. i
have derived the HRF i want [via an FIR model], but it's not obvious how i
can use my custom HRF with mkanalysis-sess.
one option, it seems, is to feed in my own regressors with the -taskreg
flag and then not
and one point of clarification: i only care about beta weights for each
condition of interest, so i don't care that -taskreg would only run an
F-test for significance maps and wouldn't give me t maps for each regressor
of interest.
thanks again,
alex
On Sun, Sep 14, 2014 at 1:55 PM, Alex Kell
On 9/14/14 1:55 PM, Alex Kell wrote:
hi freesurfers,
i would like to use an empirically derived HRF with mkanalysis-sess.
i have derived the HRF i want [via an FIR model], but it's not
obvious how i can use my custom HRF with mkanalysis-sess.
one option, it seems, is to feed in my own
yep, you can use it for anything.
doug
On 9/14/14 12:52 PM, Salil Soman wrote:
Dear Doug,
Thank you again for this email. Do you think it is possible to use
this method for ASL images as well? If so, how would you change the
options?
Best wishes,
Salil Soman, MD, MS
On Sat, May 25, 2013
Hi,
Could you please let me know if it's okay to use subjects analyzed using
Freesurfer 5.1 (os x 10.6) for DTI analysis using Freesurfer 5.3 (os x 10.8)?
Thanks.
___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
Thank you Doug. I am having trouble with extracting statistics using this
method.
I am able to use bbregister to get a transformation that registers the PD
image of the ASL to the T1. I then used this transformation matrix to
register the CBF map for the ASL study into the T1.mgz space. Checking
