[
https://issues.apache.org/jira/browse/SPARK-40442?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17610427#comment-17610427
]
Santosh Pingale commented on SPARK-40442:
-----------------------------------------
{code:java}
2022-09-28 10:20:57,000 WARN /history/application_1664214774022_4650/1/jobs/
java.lang.IllegalStateException: DB is closed.
at org.apache.spark.util.kvstore.LevelDB.db(LevelDB.java:364)
at
org.apache.spark.util.kvstore.LevelDBIterator.<init>(LevelDBIterator.java:51)
at org.apache.spark.util.kvstore.LevelDB$1.iterator(LevelDB.java:253) at
org.apache.spark.util.kvstore.KVStoreView.closeableIterator(KVStoreView.java:117)
at
org.apache.spark.status.AppStatusStore.$anonfun$applicationInfo$1(AppStatusStore.scala:44)
at org.apache.spark.util.Utils$.tryWithResource(Utils.scala:2741) at
org.apache.spark.status.AppStatusStore.applicationInfo(AppStatusStore.scala:46)
at org.apache.spark.ui.jobs.AllJobsPage.render(AllJobsPage.scala:276) at
org.apache.spark.ui.WebUI.$anonfun$attachPage$1(WebUI.scala:90) at
org.apache.spark.ui.JettyUtils$$anon$1.doGet(JettyUtils.scala:81) at
javax.servlet.http.HttpServlet.service(HttpServlet.java:503) at
javax.servlet.http.HttpServlet.service(HttpServlet.java:590) at
org.sparkproject.jetty.servlet.ServletHolder.handle(ServletHolder.java:799) at
org.sparkproject.jetty.servlet.ServletHandler$ChainEnd.doFilter(ServletHandler.java:1631)
at
org.apache.spark.ui.HttpSecurityFilter.doFilter(HttpSecurityFilter.scala:95) at
org.sparkproject.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:193) at
org.sparkproject.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1601)
at
org.apache.spark.deploy.history.ApplicationCacheCheckFilter.doFilter(ApplicationCache.scala:405)
at org.sparkproject.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:193)
at
org.sparkproject.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1601)
at
org.sparkproject.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:548)
at
org.sparkproject.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:233)
at
org.sparkproject.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1434)
at
org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:188)
at
org.sparkproject.jetty.servlet.ServletHandler.doScope(ServletHandler.java:501)
at
org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:186)
at
org.sparkproject.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1349)
at
org.sparkproject.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at
org.sparkproject.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:763)
at
org.sparkproject.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:234)
at
org.sparkproject.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127)
at org.sparkproject.jetty.server.Server.handle(Server.java:516) at
org.sparkproject.jetty.server.HttpChannel.lambda$handle$1(HttpChannel.java:400)
at org.sparkproject.jetty.server.HttpChannel.dispatch(HttpChannel.java:645) at
org.sparkproject.jetty.server.HttpChannel.handle(HttpChannel.java:392) at
org.sparkproject.jetty.server.HttpConnection.onFillable(HttpConnection.java:277)
at
org.sparkproject.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:311)
at org.sparkproject.jetty.io.FillInterest.fillable(FillInterest.java:105) at
org.sparkproject.jetty.io.ChannelEndPoint$1.run(ChannelEndPoint.java:104) at
org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:338)
at
org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:315)
at
org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:173)
at
org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
at
org.sparkproject.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:409)
at
org.sparkproject.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:883)
at
org.sparkproject.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:1034)
at java.lang.Thread.run(Thread.java:748) {code}
The error seems to be present for some applications that just have finished.
The UI also reports this error. Upon restart of the SHS however the error goes
away.
> Unstable Spark history server: DB is closed
> -------------------------------------------
>
> Key: SPARK-40442
> URL: https://issues.apache.org/jira/browse/SPARK-40442
> Project: Spark
> Issue Type: Bug
> Components: Web UI
> Affects Versions: 3.2.2
> Reporter: Santosh Pingale
> Priority: Minor
>
> Since we upgraded our spark history server to 3.2.2, it has been unstable. We
> get following log lines continuously.
> {code:java}
> 2022-09-15 08:54:57,000 WARN
> /api/v1/applications/application_xxxx/1/executors
> javax.servlet.ServletException: java.lang.IllegalStateException: DB is
> closed. at
> org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:410)
> at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:346)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:366)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:319)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:205)
> at
> org.sparkproject.jetty.servlet.ServletHolder.handle(ServletHolder.java:799)
> at
> org.sparkproject.jetty.servlet.ServletHandler$ChainEnd.doFilter(ServletHandler.java:1631)
> at
> org.apache.spark.ui.HttpSecurityFilter.doFilter(HttpSecurityFilter.scala:95)
> at
> org.sparkproject.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:193)
> at
> org.sparkproject.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1601)
> at
> org.sparkproject.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:548)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:233)
> at
> org.sparkproject.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1434)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:188)
> at
> org.sparkproject.jetty.servlet.ServletHandler.doScope(ServletHandler.java:501)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:186)
> at
> org.sparkproject.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1349)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
> at
> org.sparkproject.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:763)
> at
> org.sparkproject.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:234)
> at
> org.sparkproject.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127)
> at org.sparkproject.jetty.server.Server.handle(Server.java:516) at
> org.sparkproject.jetty.server.HttpChannel.lambda$handle$1(HttpChannel.java:400)
> at org.sparkproject.jetty.server.HttpChannel.dispatch(HttpChannel.java:645)
> at org.sparkproject.jetty.server.HttpChannel.handle(HttpChannel.java:392) at
> org.sparkproject.jetty.server.HttpConnection.onFillable(HttpConnection.java:277)
> at
> org.sparkproject.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:311)
> at org.sparkproject.jetty.io.FillInterest.fillable(FillInterest.java:105) at
> org.sparkproject.jetty.io.ChannelEndPoint$1.run(ChannelEndPoint.java:104) at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:338)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:315)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:173)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
> at
> org.sparkproject.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:409)
> at
> org.sparkproject.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:883)
> at
> org.sparkproject.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:1034)
> at java.lang.Thread.run(Thread.java:748) Caused by:
> java.lang.IllegalStateException: DB is closed. at
> org.apache.spark.util.kvstore.LevelDB.db(LevelDB.java:364) at
> org.apache.spark.util.kvstore.LevelDBIterator.(LevelDBIterator.java:51) at
> org.apache.spark.util.kvstore.LevelDB$1.iterator(LevelDB.java:253) at
> scala.collection.convert.Wrappers$JIterableWrapper.iterator(Wrappers.scala:60)
> at scala.collection.IterableLike.foreach(IterableLike.scala:74) at
> scala.collection.IterableLike.foreach$(IterableLike.scala:73) at
> scala.collection.AbstractIterable.foreach(Iterable.scala:56) at
> scala.collection.TraversableLike.map(TraversableLike.scala:286) at
> scala.collection.TraversableLike.map$(TraversableLike.scala:279) at
> scala.collection.AbstractTraversable.map(Traversable.scala:108) at
> org.apache.spark.status.AppStatusStore.executorList(AppStatusStore.scala:92)
> at
> org.apache.spark.deploy.history.HistoryAppStatusStore.executorList(HistoryAppStatusStore.scala:46)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.$anonfun$executorList$1(OneApplicationResource.scala:53)
> at
> org.apache.spark.status.api.v1.BaseAppResource.$anonfun$withUI$1(ApiRootResource.scala:142)
> at
> org.apache.spark.deploy.history.ApplicationCache.withSparkUI(ApplicationCache.scala:121)
> at
> org.apache.spark.deploy.history.HistoryServer.withSparkUI(HistoryServer.scala:133)
> at
> org.apache.spark.status.api.v1.BaseAppResource.withUI(ApiRootResource.scala:137)
> at
> org.apache.spark.status.api.v1.BaseAppResource.withUI$(ApiRootResource.scala:135)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.withUI(OneApplicationResource.scala:32)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.executorList(OneApplicationResource.scala:53)
> at sun.reflect.GeneratedMethodAccessor241.invoke(Unknown Source) at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498) at
> org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory.lambda$static$0(ResourceMethodInvocationHandlerFactory.java:52)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:124)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:167)
> at
> org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$TypeOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:219)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:79)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:475)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:397)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:81)
> at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:255)
> at org.glassfish.jersey.internal.Errors$1.call(Errors.java:248) at
> org.glassfish.jersey.internal.Errors$1.call(Errors.java:244) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:292) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:274) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:244) at
> org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:265)
> at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:234)
> at
> org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:680)
> at
> org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:394)
> ... 36 more 2022-09-15 08:54:57,000 WARN unhandled due to prior sendError
> javax.servlet.ServletException: java.lang.IllegalStateException: DB is
> closed. at
> org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:410)
> at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:346)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:366)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:319)
> at
> org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:205)
> at
> org.sparkproject.jetty.servlet.ServletHolder.handle(ServletHolder.java:799)
> at
> org.sparkproject.jetty.servlet.ServletHandler$ChainEnd.doFilter(ServletHandler.java:1631)
> at
> org.apache.spark.ui.HttpSecurityFilter.doFilter(HttpSecurityFilter.scala:95)
> at
> org.sparkproject.jetty.servlet.FilterHolder.doFilter(FilterHolder.java:193)
> at
> org.sparkproject.jetty.servlet.ServletHandler$Chain.doFilter(ServletHandler.java:1601)
> at
> org.sparkproject.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:548)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:233)
> at
> org.sparkproject.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1434)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:188)
> at
> org.sparkproject.jetty.servlet.ServletHandler.doScope(ServletHandler.java:501)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:186)
> at
> org.sparkproject.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1349)
> at
> org.sparkproject.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
> at
> org.sparkproject.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:763)
> at
> org.sparkproject.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:234)
> at
> org.sparkproject.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:127)
> at org.sparkproject.jetty.server.Server.handle(Server.java:516) at
> org.sparkproject.jetty.server.HttpChannel.lambda$handle$1(HttpChannel.java:400)
> at org.sparkproject.jetty.server.HttpChannel.dispatch(HttpChannel.java:645)
> at org.sparkproject.jetty.server.HttpChannel.handle(HttpChannel.java:392) at
> org.sparkproject.jetty.server.HttpConnection.onFillable(HttpConnection.java:277)
> at
> org.sparkproject.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:311)
> at org.sparkproject.jetty.io.FillInterest.fillable(FillInterest.java:105) at
> org.sparkproject.jetty.io.ChannelEndPoint$1.run(ChannelEndPoint.java:104) at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.runTask(EatWhatYouKill.java:338)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:315)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:173)
> at
> org.sparkproject.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:131)
> at
> org.sparkproject.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:409)
> at
> org.sparkproject.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:883)
> at
> org.sparkproject.jetty.util.thread.QueuedThreadPool$Runner.run(QueuedThreadPool.java:1034)
> at java.lang.Thread.run(Thread.java:748) Caused by:
> java.lang.IllegalStateException: DB is closed. at
> org.apache.spark.util.kvstore.LevelDB.db(LevelDB.java:364) at
> org.apache.spark.util.kvstore.LevelDBIterator.(LevelDBIterator.java:51) at
> org.apache.spark.util.kvstore.LevelDB$1.iterator(LevelDB.java:253) at
> scala.collection.convert.Wrappers$JIterableWrapper.iterator(Wrappers.scala:60)
> at scala.collection.IterableLike.foreach(IterableLike.scala:74) at
> scala.collection.IterableLike.foreach$(IterableLike.scala:73) at
> scala.collection.AbstractIterable.foreach(Iterable.scala:56) at
> scala.collection.TraversableLike.map(TraversableLike.scala:286) at
> scala.collection.TraversableLike.map$(TraversableLike.scala:279) at
> scala.collection.AbstractTraversable.map(Traversable.scala:108) at
> org.apache.spark.status.AppStatusStore.executorList(AppStatusStore.scala:92)
> at
> org.apache.spark.deploy.history.HistoryAppStatusStore.executorList(HistoryAppStatusStore.scala:46)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.$anonfun$executorList$1(OneApplicationResource.scala:53)
> at
> org.apache.spark.status.api.v1.BaseAppResource.$anonfun$withUI$1(ApiRootResource.scala:142)
> at
> org.apache.spark.deploy.history.ApplicationCache.withSparkUI(ApplicationCache.scala:121)
> at
> org.apache.spark.deploy.history.HistoryServer.withSparkUI(HistoryServer.scala:133)
> at
> org.apache.spark.status.api.v1.BaseAppResource.withUI(ApiRootResource.scala:137)
> at
> org.apache.spark.status.api.v1.BaseAppResource.withUI$(ApiRootResource.scala:135)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.withUI(OneApplicationResource.scala:32)
> at
> org.apache.spark.status.api.v1.AbstractApplicationResource.executorList(OneApplicationResource.scala:53)
> at sun.reflect.GeneratedMethodAccessor241.invoke(Unknown Source) at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498) at
> org.glassfish.jersey.server.model.internal.ResourceMethodInvocationHandlerFactory.lambda$static$0(ResourceMethodInvocationHandlerFactory.java:52)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:124)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:167)
> at
> org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$TypeOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:219)
> at
> org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:79)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:475)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:397)
> at
> org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:81)
> at org.glassfish.jersey.server.ServerRuntime$1.run(ServerRuntime.java:255)
> at org.glassfish.jersey.internal.Errors$1.call(Errors.java:248) at
> org.glassfish.jersey.internal.Errors$1.call(Errors.java:244) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:292) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:274) at
> org.glassfish.jersey.internal.Errors.process(Errors.java:244) at
> org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:265)
> at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:234)
> at
> org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:680)
> at
> org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:394)
> ... 36 more{code}
> The history server stops responding for our users.
>
> Spark version: 3.2.2
> daemon memory set to: 32768 MB
> Cluster is kerberised.
> {code:java}
> spark.history.fs.cleaner.enabled: true
> spark.history.fs.cleaner.interval: 1d
> spark.history.fs.cleaner.maxAge: 14d
> spark.history.fs.logDirectory: hdfs:///xxxx/
> spark.history.kerberos.keytab: /xxx/xxx.keytab
> spark.history.kerberos.principal xxx/x...@xxxx.com
> spark.history.provider org.apache.spark.deploy.history.FsHistoryProvider
> spark.history.store.path /local_xxxxx
> spark.history.ui.port 34000{code}
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