Thanks for your kind reply.
I can see the phylogenetic tree (class phylo) and its nodes following the
steps that you suggested. However, I wanted to observe the nodes of the
phylogenetic PCA plot (not class phylo). I now managed to conduct a more
detailed zooming at different points of the plot
Mariana,
In R, objects of the class ‘phylo’ have a particular structure to the manner in
which nodes are labeled. The easiest way to see these is to do this:
library(ape)
plot(phylo)
nodelabels()
Dean
Dr. Dean C. Adams (he/him)
Distinguished Professor of Evolutionary Biology
Director of