Thanks to Karam who retrieved the quote I mentioned from Stuart Beal.
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gene.com> was bounced by the University
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assumption that the uncertainty of the parameters is normal and
therefore symmetrical.
Best wishes,
Nick
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diagnostic plots and VPCs that do not show observed AND predicted
percentiles belong in the bin.
Best wishes,
Nick
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Hi Philip,
An exact alternative would be to use this:
$OMEGA BLOCK(2) FIX
0.078
0 0.02
$OMEGA BLOCK(1) FIX
0
Note – I have not tested this but if BLOCK(2) FIX works then BLOCK(1) FIX
should work.
Best wishes,
Nick
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Nick Holford, Professor Emeritus Clinical Pharmacology, MBChB, FRACP
mobile:NZ
file (unless that is the only way you know to get
input into R).
Best wishes,
Nick
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Nick Holford, Professor Emeritus Clinical Pharmacology, MBChB, FRACP
mobile:NZ+64(21)46 23 53 ; FR+33(6)62 32 46 72
email: n.holf...@auckland.ac.nz<mailto:n.holf...@auckland.ac.nz>
web
.
1 00001.
00.153846
Best wishes,
Nick
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mobile:NZ+64(21)46 23 53 ; FR+33(6)62 32 46 72
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sensitive half-life' should be avoided because half-life only has a
scientifically useful meaning for first-order processes that can be visualised
as exponential curves.
Life is more than PK -- its PKPD is when it gets interesting (and complicated).
Best wishes,
Nick
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Nick Holford, Professor
suppress the misleading entries in
stderror.txt.
Thanks in advance if you can throw any light on these queries.
Nick
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to 4.
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differences.
Best wishes,
Nick
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differences.
Best wishes,
Nick
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Nick Holford, Professor Clinical Pharmacology
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email: n.
n JH, Schellens JHM, et al.
Incorporation of concentration data below the limit of quantification in
population pharmacokinetic analyses. Pharmacology research & perspectives.
2015;3(2):10.1002/prp2.131
Best wishes,
Nick
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compartment at the same time and to multiple compartments at the same time. You
have to specify a dosing record for each dose and each compartment. There may
be an internal NONMEM limit but I am not aware of one.
Best wishes,
Nick
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Nick Holford, Professor Clinical Pharmacology
Dept Pharmacology
Hi Belo,
I suspect you have tried to run this code using NM-TRAN and NONMEM. NM-TRAN
does not know about the $FINEDATA record.
You need to run this code using the finedata.exe in the NONMEM util directory.
Best wishes,
Nick
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.
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University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
office:+64(9)923-6730 mobile:NZ+64(21)46 23 53 FR+33(6)62 32 46 72
email: n.holf...@auckland.ac.nz<mailto
.
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Nick Holford, Professor Clinical Pharmacology
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University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
office:+64(9)923-6730 mobile:NZ+64(21)46 23 53 FR+33(6)62 32 46 72
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Hi Niurys,
I don't see any reason why the bootstrap won't work. Its only the IDs that are
selected randomly so the FLAGs will work just the same as in the full data set.
Good luck,
Nick
-Original Message-
From: owner-nmus...@globomaxnm.com On Behalf Of
Niurys.CS
Sent: Saturday, 11
Hi Bob,
Thanks for these instructions.
Any chance you could put all the files into one zip file so I don’t have to
download each file one at a time?
Or explain how I can get my browser (Google Chrome) to download whole
directories rather than just files?
Best wishes,
Nick
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Nick Holford
Hi Bob,
I agree with Sebastien. This would be a useful option and even better if it was
user friendly option like FORMAT=CSV which also converted from scientific
format to general format (Excel format names).
Best wishes,
Nick
From: owner-nmus...@globomaxnm.com On Behalf Of
Sebastien Bihorel
& systems pharmacology. 2017;6(2):87-109.
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http://holford.fmhs.auckland.ac.nz/
http://orcid.org/-0002-4031-2514
Read the question, answer the question, attempt all questions
From: Singla, Sumeet K
Sent: Wednesday, 13 February 2019 8:35 PM
To: Nick Holford
Cc: nmusers@globomaxnm.com
Subject: Re: OFV or Diagnostic Plot ?? Which one rules...
Dr. Holford,
I d
Hi Sumeet,
The OFV is often king. But what does the VPC look like? That is the gold
standard. Diagnostic plots are equivalent to Rorschach blots.
If you find a way to let us see the VPCs then we can all enjoy the view.
Best wishes,
Nick
Holford NHG. The visual predictive check - superiority
ogress or a finished
project. Work in progress presentations are often interesting to everyone and
can lead to useful collaborations.
We look forward to seeing you all in Auckland, February 2019.
PAGANZ Local Organising Committee
Jacqueline Hannam
Nick Holford
Brian Anderson
Sam Holford
--
Nick H
ogress presentations are often interesting to everyone and
can lead to useful collaborations.
We look forward to seeing you all in Auckland, February 2019.
PAGANZ Local Organising Committee
Jacqueline Hannam
Nick Holford
Brian Anderson
Sam Holford
--
Nick Holford, Professor Clinical Pharmacolog
n work in progress or a finished
project. Work in progress presentations are often interesting to everyone and
can lead to useful collaborations.
We look forward to seeing you all in Auckland, February 2019.
PAGANZ Local Organising Committee
Jacqueline Hannam
Nick Holford
Brian Anderson
Sam H
ogress presentations are often interesting to everyone and
can lead to useful collaborations.
We look forward to seeing you all in Auckland, February 2019.
PAGANZ Local Organising Committee
Jacqueline Hannam
Nick Holford
Brian Anderson
Sam Holford
--
Nick Holford, Professor Clinical Pharmacolog
ogress presentations are often interesting to everyone and
can lead to useful collaborations.
We look forward to seeing you all in Auckland, February 2019.
PAGANZ Local Organising Committee
Jacqueline Hannam
Nick Holford
Brian Anderson
Sam Holford
--
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Hi Ruben,
I wrote an empirical translator to convert NM-TRAN to the DDMoRe MDL.
http://nmtran-to-mdl.mango-solutions.com/
It was written in awk. As far a I know there were no formal parser/lexers used
with NM-TRAN as part of DDMoRe.
Best wishes,
Nick
I assume building a parser for NM-TRAN was
#
is the default.
Best wishes,
Nick
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University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
office:+64(9)923-6730 mobile:NZ+64(21)46 23 53 FR+33(6)62 32 46 72
email: n.
From: Sohn, Winnie <w...@amgen.com>
Sent: Monday, May 14, 2018 8:41 PM
To: Nick Holford <n.holf...@auckland.ac.nz>
Subject: RE: Using Root-finding techniques to find Cmax/Tmax
Hi Nick,
I have tried to unsubscribe multiple times to NMusers. Can you please help?
Thanks,
Winnie
From
Bob,
Thanks for the zip file.
And for the motivation to explore intro7.pdf – always something interesting to
learn in the modelling world (unlike those stuck in the NCA doldrums).
Nick
From: Bauer, Robert <robert.ba...@iconplc.com>
Sent: Monday, May 14, 2018 7:16 PM
To: Nick Holford &
at a time.
Best wishes,
Nick
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using analytical solution when
clearance changes over time to an agency or a journal? Can it be
acceptable?
Thanks,
Paul
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suggestion or discuss cons and pro's anytime!
Sincerely,
Rob
-Oorspronkelijk bericht-
Van: owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com] Namens
Nick Holford
Verzonden: woensdag 6 december 2017 20:06
Aan: nmusers@globomaxnm.com
Onderwerp: Re: [FORGED] [NMusers] Allometr
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Ability to understand and converse in English is essential.
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RMIN=2
/nmbs/now recognizes when NONMEM output listing file is not
created and gives a more helpful error message.
Bug fix for VPC to display observation scatterplots.
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Thanks!
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Het Radboudumc staat geregistreerd bij de Kamer van Koophandel in het
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FMKrWM9oK8rJLdY8SAJWYFjBgghKJq4Puf-2FYL-2FU0ZWfw7WdXyvLAbuNexLbSI-2FCVo3xtUi1xo-2BoKt5pC9AlYoJFyoWaWWw8U-2Bk3phceumtMHrcuO23LjgoHs8n8Hzfx6WvC0OHOz758RQjYIRqUUrnFuHv3KfMb7oN4KjUFUiR1Ybt>
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Click http://www.merckgroup.com/disclaimerto access the German,
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Bruxelles, Belgique
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your help very much!
Best regards,
Zheng
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Ability to understand and converse in English is essential.
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and also to account for all other factors
correlated with weight (e.g. age) in order to obtain true allometric
exponents. The theory of allometry is well explained by West & Brown (2005).
Best wishes,
Nick
Holford N, Heo YA, Anderson B. A pharmacokinetic standard for babies and
adults. J Pharm S
!
Pavel
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(the variance is defined in your data). I would probably
describe the mean as a normal distributed variable, so:
Y = IPRED + EPS(1)*REPSD/SQRT(NSUB)
$SIGMA
1 FIX
Kind regards,
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e
immediately by reply email and destroy all copies of the transmittal.
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ay to declare persistent variables such that my code
would work as intended?
Thank you
Tommy Li
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87*(WT/WTstd)**0.75
The weights that will be investigated go from 30 kg up to 80 kg.
It would also be very helpful if one can give me an explanation as to
why or why not.
Thanks
Andre
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-9882043
efax: 720-2946783
www.pharmaxresearch.com
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can give
references so that I can read.
Thanks once again.
Regards
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their understanding, acquiring skills in the population analysis
of PKPD data with NONMEM.
Details of the Course can be found
athttp://www.advancedpkpd.org/pkpd-nonmem-santiago/
http://www.advancedpkpd.org/pkpd-nonmem-santiago/
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). Thank you.
buSp9xeMeKEbrUze
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http
birth so this model is obviously
misspecified unless you only study neonates on the day of birth when GA
is the same as PMA.
Best wishes,
Nick
Holford N. Dosing in children. Clin Pharmacol Ther. 2010;87(3):367-70.
Anderson BJ, Holford NHG. Tips and traps analyzing pediatric PK data.
Pediatric
,
Peking Union Medical College Hospital, Beijing, China
M.P.: +86-18610966092
O.P.: +86-10-69158356
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with something
like the M3 likelihood method.
Regards,
Rupert
Rupert Austin, PhD
Senior Scientist
BAST Inc Limited
Holywell Park
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*From:*owner-nmus...@globomaxnm.com
[mailto:owner-nmus...@globomaxnm.com] *On Behalf Of *Nick Holford
*Sent:* 03 October
to simulate data and
wait until finished before starting Monolix estimation.
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.
Thank you in advance.
Siwei
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this when you define blocks which are not linked in any way with another
correlation (like the band matrices above) e.g.
1
1 1
1 1 1
0 0 0 1
0 0 0 1 1
You would specify this as two blocks for NONMEM like this:
$OMEGA BLOCK(3)
1
1 1
1 1 1
$OMEGA BLOCK(2)
1
1 1
Best wishes,
Nick
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address for your career in the NHS and can be
accessed anywhere
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email
I sent two posts to nmusers this morning (NZ time). The first never
showed up but the second one did.
I tried sending the first post two more times and they did not appear on
nmusers.
This is a test post to see if all my posts are being blocked.
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into this? Has anyone encountered
similar things before? I truly appreciate any comments or suggestions.
Yu
Graduate student in Clinical Pharmaceutical Science
University of Iowa
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in Pharmacology
Selwyn College
Cambridge
CB3 9DQ
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at (1)
gfortran: internal compiler error: Aborted (program f951)
**
This error is very similar to that Pavel reported on NM7.20+XPOSE
several years ago.
Does anyone know how to fix this error?
Thanks,
Masaki
--
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Pavel,
The solution is to assign R to another variable. I've also re-structured
your code to make things clearer (IMHO).
$PK
IF (ICALL.EQ.4) THEN ; only one ICALL.EQ.4 block is needed
IF (NEWIND.NE.2) THEN
CALL RANDOM(2,R)
UNUM=R ; save R value in a new variable
ENDIF
IF
tried it on
different computers.
On Wed, Mar 26, 2014 at 06:33 PM, Nick Holford wrote:
Pavel,
The solution is to assign R to another variable. I've also
re-structured your code to make things clearer (IMHO).
$PK
IF (ICALL.EQ.4) THEN ; only one ICALL.EQ.4 block is needed
at 07:48 PM, Nick Holford wrote:
Pavel,
Unless your drug is an alkylating agent the use of AUC will always
be mechanistically wrong.
I hope you also considered the possibility of disease progression
(i.e. changing baseline) and also the possibility of changing C50
due
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Nick Holford, Professor Clinical Pharmacology
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wondering what was going wrong.
I appreciate your comments.
Thanks!
Siwei
On Tue, Dec 10, 2013 at 1:22 PM, Nick Holford
n.holf...@auckland.ac.nz mailto:n.holf...@auckland.ac.nz wrote:
Xinting,
You are correct. Negative simulated measurements occur when you
have an additive
and $THETAR records allowing reference to THETA
parameters by name.
Support for NESI grid submission.
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Nick Holford, Professor Clinical Pharmacology
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Nick Holford, Professor Clinical Pharmacology
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.
I guess I will play a bit with simulations and see how much this matters.
Thank you,
Paolo
On 2013/11/11 21:42, Nick Holford wrote:
Paulo,
The note associated with my Slide 7 is not intended to be a current
recommendation but is intended to show the history of ideas. Stuart
Beal examined
fixing the additive component to 1/2BLQ is reasonable.
Cheers,
Rob
On 2013/11/09 06:55, Nick Holford wrote:
Paulo,
I wish you luck in trying to do this. I also spend some time trying
to persuade the people in your lab to do intelligent things with
their measurements when I was in Cape Town.
I
capacity.
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Nick Holford, Professor Clinical Pharmacology
Dept Pharmacology Clinical Pharmacology, Bldg 503 Room 302A
University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
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Nick Holford, Professor Clinical Pharmacology
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in a
single model
building? If not, could you please explain this a little bit?
Thank you in advance!
Best Regards
--
Xinting
Wang
--
Xinting
--
Nick Holford, Professor Clinical Pharmacology
Dept Pharmacology Clinical Pharmacology, Bldg 503
Wang
--
Nick Holford, Professor Clinical Pharmacology
Dept Pharmacology Clinical Pharmacology, Bldg 503 Room 302A
University of Auckland,85 Park Rd,Private Bag 92019,Auckland,New Zealand
office:+64(9)923-6730 mobile:NZ +64(21)46 23 53
email: n.holf...@auckland.ac.nz
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distribution is strictly prohibited.
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Nick Holford, Professor Clinical Pharmacology
Dept Pharmacology Clinical Pharmacology, Bldg 503 Room 302A
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Message - From: Standing Joseph (GREAT ORMOND
STREET HOSPITAL FOR CHILDREN NHS FOUNDATION TRUST)
joseph.stand...@nhs.net
To: J.H.Proost j.h.pro...@rug.nl; Matt Hutmacher
matt.hutmac...@a2pg.com; 'Nick Holford'
n.holf...@auckland.ac.nz; 'nmusers' nmusers@globomaxnm.com
Sent: Wednesday
-Original Message-
From: owner-nmus...@globomaxnm.com [mailto:owner-nmus...@globomaxnm.com] On
Behalf Of Nick Holford
Sent: Monday, September 02, 2013 12:16
To: 'nmusers'
Subject: Re: [NMusers] Time-varing covariate and renal function as a covariate
Matt,
Thanks for your interest
, Yonsei University
Asia: Yusuke Tanigawara, Keio University
Europe: Mats Karlsson, Uppsala University
Europe: France Mentré, Université Paris Diderot, Chair of the WCoP
Executive Committee
North America: Holly Kimko, Janssen RD
North America: Stacey Tannenbaum, Astellas Pharma
Oceania: Nick Holford
special to treat this type covariates then?
Thanks!
Best regards,
Siwei
On Fri, Aug 23, 2013 at 1:10 PM, Nick Holford
n.holf...@auckland.ac.nz mailto:n.holf...@auckland.ac.nz wrote:
Siwei,
I don't know why you think this complicated. Suppose you have age
(AGE) as a covariate
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