[Paraview] Point color according to number of bonds

2013-01-17 Thread Tropin, Nikita
Hello, I'm the new user of Paraview and I'm trying to visualize a set of particles with bonds between them (from DEM simulation). So I have a series of vtu files with points and cells of type 3 (VTK_LINE) that I call bonds. What I want to do is to set the color of each point according to the

Re: [Paraview] Animation with sudden large intervals between consecutive frames

2013-01-17 Thread Tom Fahner
After some more diagnostics we found that the graphics card memory was full during the large intervals. As we did not manage to monitor the graphics card memory usage in normal operation, it is not entirely certain that this is the cause, however since the normal memory was slowly being filled

Re: [Paraview] Creating movies using multiple HDF5 data files

2013-01-17 Thread Felipe Bordeu
You can generate one (and only one) xdmf file with temporal information, pointing to each one of your HDF5 files. So ParaView will be aware of the temporal dimension of your data. More info in http://www.xdmf.org/index.php/XDMF_Model_and_Format. Felipe Le 17/01/2013 03:17, Pradeep Jha a

Re: [Paraview] PV-3.98-RC binary error

2013-01-17 Thread Carlo
Utkarsh Ayachit utkarsh.ayachit at kitware.com writes: Carlo, I am afraid this is not the segfault my email was referring to. Could you try removing (or copy them over somewhere) any config files in ${HOME}/.config/ParaView and see if that makes a difference? Utkarsh Dear Utkarsh,

[Paraview] RE : RE : pvbatch, Render, WriteImage

2013-01-17 Thread Glockner Stéphane
I have remove any config files in ${HOME}/.config/ParaView and it works better, the script only need paraview.simple._DisableFirstRenderCameraReset() If the line is not written, only rotation is done, not the zoom Regards Stéphane De : Glockner

Re: [Paraview] Xdmf weirdness and question

2013-01-17 Thread Paul Melis
On 01/14/13 17:33, Paul Melis wrote: I use the following Xdmf file to read this set into PV 3.14.1: ?xml version=1.0 ? !DOCTYPE Xdmf SYSTEM Xdmf.dtd [] Xdmf Domain Grid Name=TheGrid GridType=Uniform Topology TopologyType=3DRectMesh Dimensions=4096 4096 160/ Geometry

Re: [Paraview] Point color according to number of bonds

2013-01-17 Thread David E DeMarle
You could use a python programmable filter to iterate through the points and call vtkUnstructuredGrid::GetPointCells() to get the count of bonds for each one, and store those counts into a scalar array. Then you could apply the glyph filter and color the glyphed points by that array. You might

Re: [Paraview] Connecting to pvserver

2013-01-17 Thread Biddiscombe, John A.
Any ideas what is going wrong? vtkSocketCommunicator (0x7f953c4cee30): Endian handshake failed. There is a big clue here in the error message. You didn't actually say what the remote system was, but it'd be worth checking if it's a different architecture JB From: paraview-boun...@paraview.org

Re: [Paraview] Connecting to pvserver

2013-01-17 Thread David E DeMarle
On Thu, Jan 17, 2013 at 2:12 AM, Pradeep Jha pradeep.kumar@gmail.com wrote: Hello, I am trying to use PV for the first time in parallel. I have some basic questions. I have installed PV 3.98 from source on my local machine (Mac OSX). I don't have the root permissions for the remote

Re: [Paraview] Animation with sudden large intervals between consecutive frames

2013-01-17 Thread Utkarsh Ayachit
Try disabling the use of display lists i.e. turn on Use Immediate Mode Rendering from the settings dialog (http://paraview.org/Wiki/ParaView/Users_Guide/Settings). That may help with the GPU memory issue. We do release display lists when data changes, but maybe there's a driver bug or something

Re: [Paraview] PV-3.98-RC binary error

2013-01-17 Thread Utkarsh Ayachit
Can you try running paraview as follows? Let's try to see what libraries are getting loaded? LD_DEBUG=libs .../bin/paraview Utkarsh On Thu, Jan 17, 2013 at 5:59 AM, Carlo cf...@cam.ac.uk wrote: Utkarsh Ayachit utkarsh.ayachit at kitware.com writes: Carlo, I am afraid this is not the

Re: [Paraview] [EXTERNAL] Visibility control error in comparative view?

2013-01-17 Thread Scott, W Alan
Takuya, I believe that this behavior has been fixed in master, to be replaced by other issues. I will write up bugs in the bug tracker. Bugs 13798, 13799 and 13800. Alan -Original Message- From: paraview-boun...@paraview.org [mailto:paraview-boun...@paraview.org] On Behalf Of Takuya

Re: [Paraview] PV-3.98-RC binary error

2013-01-17 Thread Carlo
Utkarsh Ayachit utkarsh.ayachit at kitware.com writes: Can you try running paraview as follows? Let's try to see what libraries are getting loaded? LD_DEBUG=libs .../bin/paraview Utkarsh Dear Utkarsh, thanks for your suggestion. I noticed I had this OpenFOAM script in .bashrc

Re: [Paraview] PV-3.98-RC binary error

2013-01-17 Thread Utkarsh Ayachit
Phew! Glad it's working. On Thu, Jan 17, 2013 at 1:24 PM, Carlo cf...@cam.ac.uk wrote: Utkarsh Ayachit utkarsh.ayachit at kitware.com writes: Can you try running paraview as follows? Let's try to see what libraries are getting loaded? LD_DEBUG=libs .../bin/paraview Utkarsh Dear

Re: [Paraview] Exporting to vrml with python in 3.98 or 3.14.1

2013-01-17 Thread Sven Buijssen
Raphael, You did not specify any input for the VRML exporter. Try using vrml.SetView(RenderView) vrml.Write() at the end of your script. Sven Raphael Münster wrote, On 17.01.2013 19:50: Hello, I am trying to export data to vrml with a Python script in 3.98 and 3.14.1, but no vrml

Re: [Paraview] Animation with sudden large intervals between consecutive frames

2013-01-17 Thread Tom Fahner
It seems like that option did the trick. The animations are now running smoothly from the start. Still the memory usage on the graphics card is large, up to the maximum capacity, but not over it. Thanks for the advice! 2013/1/17 Utkarsh Ayachit utkarsh.ayac...@kitware.com Try disabling the use

Re: [Paraview] Exporting to vrml with python in 3.98 or 3.14.1

2013-01-17 Thread Raphael Münster
On 17.01.2013 20:38, Sven Buijssen wrote: You did not specify any input for the VRML exporter. Try using vrml.SetView(RenderView) vrml.Write() at the end of your script. Sven Thanks Sven, that did it ;) Raphael ___ Powered by

Re: [Paraview] Creating movies using multiple HDF5 data files

2013-01-17 Thread Pradeep Jha
Hello, thanks for the response. I managed to create and xdmf file that seems to be working. But I want to know if I can make the file more concise. I am dealing with a simple cube of dimension 512^3 for all time steps and the name of my variables and everything remains the same. Only the

Re: [Paraview] [EXTERNAL] Visibility control error in comparative view?

2013-01-17 Thread Takuya OSHIMA
Hi Alan, Thanks for the info. I tried today's git-master but the behavior didn't change. Is the fix in one of the stage branches or somewhere? Meanwhile, I noticed that the problem has already been reported and filed as a bug. http://paraview.org/Bug/view.php?id=13002 Takuya OSHIMA, Ph.D.