[Bioc-devel] Commit access for additional developer on missMethyl package

Hi Bioconductor Team, I would like to organise commit access for a new developer on the missMethyl package? Calandra Grima (calandra.gr...@petermac.org) will be joining the maintenance team for the package and Andrew Lonsdale can be removed. Please let me

Re: [R-pkg-devel] Check results on r-devel-windows claiming error but tests seem to pass?

On 26 March 2024 at 09:37, Dirk Eddelbuettel wrote: | | Avi, | | That was a hickup and is now taken care of. When discussing this (off-line) | with Jeroen we (rightly) suggested that keeping an eye on Typo, as usual, "he (rightly) suggested". My bad. D. | |

Re: [R-pkg-devel] using portable simd instructions

Hi Jesse, What I've done is to use a mix of compile-time detection of compiler SIMD support and run-time detection of SIMD hardware support. At package load, SIMD-specific versions of functions are installed in a symbol table. It's not perfect and it can be hard to support evolving platforms,

Re: [R-pkg-devel] using portable simd instructions

On 3/26/24 10:53, jesse koops wrote: Hello R-package-devel, I recently got inspired by the rcppsimdjson package to try out simd registers. It works fantastic on my computer but I struggle to find information on how to make it portable. It doesn't help in this case that R and Rcpp make

Re: [R-pkg-devel] using portable simd instructions

On 26 March 2024 at 10:53, jesse koops wrote: | How can I make this portable and CRAN-acceptable? But writing (or borrowing ?) some hardware detection via either configure / autoconf or cmake. This is no different than other tasks decided at install-time. Start with 'Writing R Extensions', as

Re: [R-pkg-devel] Check results on r-devel-windows claiming error but tests seem to pass?

Avi, That was a hickup and is now taken care of. When discussing this (off-line) with Jeroen we (rightly) suggested that keeping an eye on https://contributor.r-project.org/svn-dashboard/ is one possibility to keep track while we have no status alert system from CRAN. I too was quite

Re: [R-pkg-devel] How to store large data to be used in an R package?

On 25 March 2024 at 11:12, Jairo Hidalgo Migueles wrote: | I'm reaching out to seek some guidance regarding the storage of relatively | large data, ranging from 10-40 MB, intended for use within an R package. | Specifically, this data consists of regression and random forest models | crucial for

[R-pkg-devel] using portable simd instructions

Hello R-package-devel, I recently got inspired by the rcppsimdjson package to try out simd registers. It works fantastic on my computer but I struggle to find information on how to make it portable. It doesn't help in this case that R and Rcpp make including Cpp code so easy that I have never had

[Bioc-devel] Important Bioconductor Release Deadlines

Import update: The Bioconductor Release will be May 1 following the release of R 4.4 on April 24. The Bioconductor 3.18 branch will be frozen Monday April 15th. After that date, no changes will be permitted ever on that branch. The deadline for devel Bioconductor 3.19 for packages to pass R

Re: [Rd] Wish: a way to track progress of parallel operations

Henrik, Thank you for taking the time to read and reply to my message! On Mon, 25 Mar 2024 10:19:38 -0700 Henrik Bengtsson wrote: > * Target a solution that works the same regardless whether we run in > parallel or not, i.e. the code/API should look the same regardless of > using, say,