Re: [Rd] Plotmath on Fedora 31 broken with with pango >= 1.44 - workarounds?

Thanks Iñaki, that worked a treat. Gavin On Wed, 25 Mar 2020 at 04:28, Iñaki Ucar wrote: > > On Wed, 25 Mar 2020 at 01:14, Gavin Simpson wrote: > > > > Dear list > > > > On Fedora 31 the pango library has recently updated to version >= 1.44 > >

[Rd] Plotmath on Fedora 31 broken with with pango >= 1.44 - workarounds?

ing reported bug on the RedHat Bugzilla: https://bugzilla.redhat.com/show_bug.cgi?id=1815128 Beyond switching to `type = 'Xlib'`, has anyone worked around this issue on a Fedora 31 or later system? Thanks in advance Gavin -- Gavin Simpson, PhD __ R-deve

[R-pkg-devel] Avoiding differences between Examples output on Windows due to tibble

ere. Thanks in advance Gavin -- Gavin Simpson, PhD __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [Rd] Update CRAN submission process

n automated yet? > > > — > Patrick Perry > Assistant Professor > NYU Stern School of Business > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD ___

Re: [R-pkg-devel] Redefinition of generic for plot function breaks plot.formula

w work on regular data > frames as well. If labels are present, these are used. If not, not. > > Benjamin > > Am 01.09.2015 um 15:44 schrieb Gavin Simpson: > >> ...or have an object that is a data.frame but to which you add an >> additional class >> >> class(obj) &l

Re: [R-pkg-devel] Redefinition of generic for plot function breaks plot.formula

http://www.imbe.med.uni-erlangen.de/cms/benjamin_hofner.html > http://www.benjaminhofner.de > > __ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel > -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel

Re: [Rd] NEWS.md support on CRAN

as plain text. G On 4 June 2015 at 11:09, Prof Brian Ripley rip...@stats.ox.ac.uk wrote: On 04/06/2015 17:00, Gavin Simpson wrote: ... 1. Markdown was designed to be as readable as possible in plain text format (i.e. the sources, not the rendered file). There's nothing stopping you reading

Re: [Rd] NEWS.md support on CRAN

On 4 June 2015 at 11:16, Duncan Murdoch murdoch.dun...@gmail.com wrote: On 04/06/2015 1:09 PM, Prof Brian Ripley wrote: On 04/06/2015 17:00, Gavin Simpson wrote: ... 1. Markdown was designed to be as readable as possible in plain text format (i.e. the sources, not the rendered file

Re: [Rd] R_HOME default setting

? Thanks Karim [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD [[alternative HTML version deleted

Re: [Rd] error code 1 from Lapack routine 'dsyevr'

]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r

Re: [Rd] timings for examples in R CMD check

-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Re R CMD check checking in development version of R

. Information is not knowledge. And knowledge is certainly not wisdom. Clifford Stoll On Thu, Aug 28, 2014 at 7:39 AM, Simon Urbanek simon.urba...@r-project.org wrote: On Aug 27, 2014, at 6:01 PM, Gavin Simpson ucfa...@gmail.com wrote: On 27 August 2014 15:24, Hadley Wickham h.wick...@gmail.com

Re: [Rd] Re R CMD check checking in development version of R

, the official wisdom, AFAIK, is that Depends is not warranted. ~G On Thu, Aug 28, 2014 at 11:43 AM, Gavin Simpson ucfa...@gmail.com wrote: I fully agree. This is how I have come to understand Depends vs Imports and why I currently will not be removing vegan from Depends for my analogue

[Rd] Re R CMD check checking in development version of R

in the view of R Core given this change to R CMD check. Thanks in advance Gavin -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Re R CMD check checking in development version of R

-- http://had.co.nz/ -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Re R CMD check checking in development version of R

in DESCRIPTION. What I'm pushing back on is the notion that *no* packages should be in Depends. Cheers, G -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Re R CMD check checking in development version of R

On Aug 27, 2014 5:24 PM, Hadley Wickham snip / I'd say: Depends is a historical artefact from ye old days before package namespaces. Apart from depending on a specific version of R, you should basically never use depends. (The one exception is, as mentioned in R-exts, if you're writing

Re: [Rd] Inconsistent handling of data frames in min(), max(), and mean()

the Summary.data.frame methods as well. More comments in-line On 22 August 2014 02:23, Martin Maechler maech...@stat.math.ethz.ch wrote: Gavin Simpson ucfa...@gmail.com on Thu, 21 Aug 2014 12:32:31 -0600 writes: snip/ mean(df) [1] NA Warning message: In mean.default(df) : argument

[Rd] Inconsistent handling of data frames in min(), max(), and mean()

can't see the sense in having `mean` work the way it does now? Thanks, Gavin -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] R CMD check for the R code from vignettes

__ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https

Re: [Rd] R CMD check for the R code from vignettes

On 2 June 2014 15:59, Duncan Murdoch murdoch.dun...@gmail.com wrote: On 03/06/2014, 4:12 AM, Gavin Simpson wrote: On 2 June 2014 11:44, Duncan Murdoch murdoch.dun...@gmail.com mailto:murdoch.dun...@gmail.com wrote: Several of us have told you the real harm: it means that users

Re: [Rd] A bug in princomp(), perhaps?

Priv: pda...@gmail.com __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org

Re: [Rd] A bug in princomp(), perhaps?

of `x’ with NAs. This is my main point. Ravi *From:* Gavin Simpson [mailto:ucfa...@gmail.com] *Sent:* Friday, May 30, 2014 10:46 AM *To:* Ravi Varadhan *Cc:* peter dalgaard; r-devel@r-project.org *Subject:* Re: [Rd] A bug in princomp(), perhaps? Ravi, You mean something

[Rd] Bug in tools:::.check_package_depends ?

' not found Thanks in advance Gavin -- Gavin Simpson, PhD [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] [RFC] A case for freezing CRAN

]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] [RFC] A case for freezing CRAN

/listinfo/r-devel -- Gavin Simpson, PhD __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] [RFC] A case for freezing CRAN

assumed that 'latest' would be the same. Annoying yes, but easy to solve. Michael __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD __ R-devel@r

Re: [Rd] ‘:::’ call

mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Gavin Simpson, PhD __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Correct NAMESPACE approach when writing an S3 method for a generic in another package

, but it has to be done via an explicit export(), cf. It is possible to export variables from a namespace which it has imported from other namespaces: this has to be done explicitly and not via exportPattern [Writing R Extensions]. /H Martyn On Fri, 2013-08-23 at 22:01 -0600, Gavin Simpson wrote

Re: [Rd] Correct NAMESPACE approach when writing an S3 method for a generic in another package

()` will result in an error. As long as the package containing the definition of the generic is not attached, there is no function `foo()` and hence the user gets an error. G On 26 August 2013 13:12, Paul Gilbert pgilbert...@gmail.com wrote: On 13-08-26 12:04 PM, Gavin Simpson wrote: Right

[Rd] Accessing the formals() of a non-exported method without :::?

arguments of a non-exported S3 method? Thanks. G -- Gavin Simpson __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Accessing the formals() of a non-exported method without :::?

michael.weyla...@gmail.com wrote: On Aug 23, 2013, at 11:15, Gavin Simpson ucfa...@gmail.com wrote: Dear List, I'm in the process of making tweaks to my various R packages following changes in r-devel for package checks. I'm wondering about the one use of ::: in one of my packages. I am

[Rd] Correct NAMESPACE approach when writing an S3 method for a generic in another package

of these from Depends if I can solve the above issue. Thanks in advance. Gavin -- Gavin Simpson __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Accessing the formals() of a non-exported method without :::?

By ...I had forgotten that a package can refer to any of *its own packages* I of course meant ...I had forgotten that a package can refer to any of *its own functions* Guess I should call it a night... G On 23 August 2013 21:49, Gavin Simpson ucfa...@gmail.com wrote: Thanks Michael

[Rd] Trouble building package using R in development

’ --- ERROR: package installation failed Can anyone suggest where to go from here? TIA Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679

Re: [Rd] Trouble building package using R in development

here? All the best, Gavin [1] http://cran.r-project.org/doc/manuals/r-devel/R-exts.html#Checking-and-building-packages On Wed, 2013-01-16 at 16:05 +0100, Gavin Simpson wrote: Dear List, I'm having considerable trouble setting up my environment (Linux, Fedora 16, Bash) to build and check

[Rd] R CMD check not reading R_LIBS from ~/.R/check.Renviron

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http

Re: [Rd] Trouble building package using R in development

this through today suggests there is a difference between R --vanilla CMD check and R CMD check. G Hadley -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565

Re: [Rd] Rcmd_environ and R_LIBS_{USER,SITE}

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http

Re: [Rd] Why is there no within.environment function?

://stat.ethz.ch/mailman/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC

[Rd] Controlling simplification in apply()?

`...`? If there was I'd be happy to provide a first stab and contribute updated documentation. All the best, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson

Re: [Rd] requesting a new SIG mailing list

/pipermail/r-sig-ecology/2011-July/002274.html (in the same search I couldn't find any single reference to hydrology in the R-sig-geo during the year 2011) -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL

Re: [Rd] package DESCRIPTION file and CRAN Task View entries?

that your email is processed, include a subject entry in your email. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e

Re: [Rd] round() ignores missing arguments if it is used inside another function where some arguments are missing.

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT

Re: [Rd] readRDS and saveRDS

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http

[Rd] methods() not listing some S3 plot methods...?

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http

Re: [Rd] methods() not listing some S3 plot methods...?

On Fri, 2011-08-26 at 07:06 -0700, Martin Morgan wrote: On 08/26/2011 04:44 AM, Gavin Simpson wrote: Dear List, This may be related to this email thread initiated by Ben Bolker last month: https://stat.ethz.ch/pipermail/r-devel/2011-July/061630.html In answering this Question

Re: [Rd] Inconsistency between rowMeans documentation and reality?

As they are written for speed, they blur over some of the subtleties of ‘NaN’ and ‘NA’. So, given that (and that real NA is a specific NaN) I think it is perfectly reasonable to claim they are consistent with mean. On Tue, 5 Apr 2011, Gavin Simpson wrote: Dear List, I'm

[Rd] Inconsistency between rowMeans documentation and reality?

grDevices utils datasets methods [7] base loaded via a namespace (and not attached): [1] tools_2.13.0 Thanks, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20

[Rd] Bug in tools::compactPDF() in 2.13-0-alpha

LC_IDENTIFICATION=C attached base packages: [1] tools stats graphics grDevices utils datasets [7] methods base Thanks, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f

Re: [Rd] Bug in tools::compactPDF() in 2.13-0-alpha

On Sun, 2011-03-27 at 09:00 -0400, Duncan Murdoch wrote: On 11-03-27 8:48 AM, Gavin Simpson wrote: Dear List, There seems to be an bug in compactPDF() or at least an inconsistency with the documented behaviour. Thanks, looks easy to fix. I'll make the correction. (A bit more below

[Rd] rebuilding vignettes in 2.13-0-alpha fails if name of source dir is not package name

’ for details -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w

Re: [Rd] terribly annoying bug with POSIXlt : one o'clock is midnight?

BST as.POSIXlt(0,origin=1970-01-01 00:00:00, tz = GMT) [1] 1970-01-01 GMT as.POSIXlt(0,origin=1970-01-01 23:59:59, tz = GMT) [1] 1970-01-01 23:59:59 GMT G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL

[Rd] Minor typo in influence.measures.Rd ?

in Table 3, p.184 ### Both are against the R svn trunk, r54122, and are attached, but may not make it through the mailing list filters. All the best, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL

Re: [Rd] License statement

__ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building

Re: [Rd] possible bug in chron packages

Joris -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http

Re: [Rd] [Rcpp-devel] GPL and R Community Policies (Rcpp)

https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk

Re: [Rd] Reordering entries in package manual PDF's

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT

Re: [Rd] Decision tree and factor variables

? Thanks. Wrong list. R-Devel is for discussion pertaining to development of and with R. You need R-Help. G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson

Re: [Rd] No RTFM?

forward now, if you are sufficiently motivated and have the time, would be to rewrite the posting guide and send it to the list for comments/suggestions. IIRC this was how the original guide was produced. G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson

Re: [Rd] How do you make a formal feature request?

]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building

Re: [Rd] One possible cause for incorrect symbols in X11() output

etc in place of pch == 1. Am I inserting this incorrectly? Many thanks, G (This workaround was culled from https://bugs.launchpad.net/ubuntu/+source/fontconfig/+bug/551977 ) -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0

Re: [Rd] One possible cause for incorrect symbols in X11() output

name=familystringSymbol/string/test edit name=family mode=prepend binding=same stringStandard Symbols L/string /edit /match alias binding=same familyZapfDingbats/family acceptfamilyDingbats/family/accept /alias /fontconfig On Thu, 19 Aug 2010, Gavin Simpson

Re: [Rd] [R] Prime Numbers Pkgs - Schoolmath is broken

On Tue, 2010-06-15 at 13:54 +0200, Peter Dalgaard wrote: Gavin Simpson wrote: On Mon, 2010-06-14 at 07:16 -0700, Red Roo wrote: primes() and primlist are broken in Schoolmath pkg on CRAN. My analysis can be found here http://j.mp/9BNI9q Not sure what the procedure is for getting

Re: [Rd] [R] Prime Numbers Pkgs - Schoolmath is broken

, minimal, self-contained, reproducible code. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower

[Rd] Standard non-standard evaluation problem with 2.10-0

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls

[Rd] SOLVED: Re: Standard non-standard evaluation problem with 2.10-0

, and it was my mistake in using '[[' where I meant '['. All the best, Gavin On Tue, 2009-11-03 at 20:05 +, Gavin Simpson wrote: Dear List I am getting an error when checking my analogue package with R2.10.0-patched. The error comes when running a function within which I use the standard

Re: [Rd] eurodist example dataset is malformed

investigation. HTH G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w

Re: [Rd] Problem using model.frame with argument subset in own function

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT

[Rd] Problem using model.frame with argument subset in own function

modify foo() to allow it to have a formal subset argument, passed to model.frame? Any other suggestions gratefully accepted. Thanks in advance, G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography

[Rd] Bug in print.Arima and patch

- matrix(coef, 1L, dimnames = list(NULL, names(coef))) HTH G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e

Re: [Rd] Bug in base function sample ( ) (PR#13727)

) Highest Regards, Michael Chajewski __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679

[Rd] Improve aggregate.default ...?

variable? Would a change of this kind be something R Core would consider making to aggregate.default if a good solution is found? Thanks in advance, G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography

Re: [Rd] Improve aggregate.default ...?

being produced. I was really looking for ideas for improving aggregate.default in general. The solution I posted has its own infelicities... Cheers, G On Sat, May 9, 2009 at 8:14 AM, Gavin Simpson gavin.simp...@ucl.ac.uk wrote: Hi, I find it a bit annoying that aggregate.default forces

Re: [Rd] [R] pdf() and pch problems

and provide commented, minimal, self-contained, reproducible code. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e

Re: [Rd] [R] pdf() and pch problems

On Thu, 2009-01-22 at 15:08 +, Brian D Ripley wrote: On Thu, 22 Jan 2009, Gavin Simpson wrote: On Thu, 2009-01-22 at 15:21 +0100, Martin Maechler wrote: TZ == T Zumbrunn t.zumbr...@unibas.ch on Thu, 22 Jan 2009 14:52:37 +0100 writes: TZ Quoting Brian D Ripley rip

[Rd] Missing links on Windows and \link[bar]{foo}; clarification

/ package? Is this different when referring to a function in another, non-recommended package (i.e. that \code{\link{panel.xyplot}} is preferred in most situations)? Thanks in advance, Gavin -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson

Re: [Rd] Missing links on Windows and \link[bar]{foo}; clarification

with the mark-up that the new parser identified. Some changes I made (not related to the parser version 2 warnings) triggered these warnings on R-Forge. All the best, Gavin On Tue, 13 Jan 2009, Gavin Simpson wrote: Dear List, In one of my packages on R-Forge I have a custom panel function

[Rd] example() and ask

version.string R version 2.8.0 Under development (unstable) (2008-06-18 r45948) Many thanks, G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography

[Rd] bug in (and patch for) example preserving device 'ask' state [Was Re: example() and ask]

. All the best, G On Wed, 2008-06-18 at 13:28 +0100, Gavin Simpson wrote: Dear list, Is it intentional that example() opens a new device and leaves it in a mode where it asks (prompts) the user to Press return to see the next plot for *all* subsequent plots on that device. For example

Re: [Rd] Linux installation

/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London

[Rd] 2.7.0 beta (rev 45263) failing 'make vignettes'

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http

Re: [Rd] 2.7.0 beta (rev 45263) failing 'make vignettes'

On Sat, 2008-04-12 at 17:48 +0100, Prof Brian Ripley wrote: On Sat, 12 Apr 2008, Gavin Simpson wrote: Dear list, On Fedora 8 I downloaded the beta version of R via svn. make and make check-all worked fine, but make vignettes is failing with: make[1]: Entering directory `/home/gavin

[Rd] r44608 fails make check-all in scatter.smooth example

though! Cheers, G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w

Re: [Rd] r44608 fails make check-all in scatter.smooth example

, I hope. Dear Prof. Ripley, Yep, works for me. Cheers, Gavin On Mon, 25 Feb 2008, Gavin Simpson wrote: Dear List, Having had my appetite sufficiently whetted by Prof. Ripley's email about the new graphics capabilities in Unixes, I wanted to try them out. I updated to svn

Re: [Rd] 0.450.45 = TRUE (PR#10744)

Team who will now have to deal with your bug report in the R bug tracker. HTH G Cheers! Jacques. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565

Re: [Rd] pheno package (PR#10674)

be a bit miffed that you appear to have failed to heed any of the advice and requests in the posting guide and instructions on what is and is not a bug in R from the FAQ. -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522

Re: [Rd] bug using matplot (PR#10676)

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT

Re: [Rd] help files for load and related functions

://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Dr. Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street

Re: [Rd] Problem with points/lines (PR#10472)

, not from interrogation of the SVN version. If considered for inclusion, I'd be happy to get these in better shape and write appropriate Rd files as required? All the best, G ## points and Axis methods for objects of class table ## Gavin Simpson 2007 based in large part on plot.table `points.table

Re: [Rd] Problem with points/lines (PR#10472)

On Thu, 2007-11-29 at 17:34 +0100, Peter Dalgaard wrote: Gavin Simpson wrote: On Thu, 2007-11-29 at 16:36 +0100, Peter Dalgaard wrote: [EMAIL PROTECTED] wrote: Full_Name: Carlos Gershenson Version: 2.6.1 OS: MacOSX Submission from: (NULL) (24.128.48.138) Hi, Try

[Rd] correct Rd markup for \value{}

) -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E

Re: [Rd] Error while fitting Partial Proportional Odds model using vglm

are what VGAM expects, and if the problem still persists, email Thomas with a reproducible example. G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC [f] +44 (0)20 7679 0565 UCL

Re: [Rd] step() in sink() and Sweave()

On Wed, 2007-06-13 at 08:04 -0700, Seth Falcon wrote: Jari Oksanen [EMAIL PROTECTED] writes: On Wed, 2007-06-13 at 13:33 +0100, Gavin Simpson wrote: Dear Developers, This change also just bit me whilst updating Sweave documents for some computer classes. Is there a work-around

Re: [Rd] Quick notes on R with F7

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls/ UK. WC1E 6BT. [w] http

Re: [Rd] CRAN packages maintained by you

-- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC ENSIS, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building, [e] gavin.simpsonATNOSPAMucl.ac.uk Gower Street, London [w] http://www.ucl.ac.uk/~ucfagls

Re: [Rd] Wishlist: Make screeplot() a generic (PR#9541)

can provide a patch for this scenario for consideration? All the best, Gav On Fri, 2007-03-02 at 17:53 +0100, [EMAIL PROTECTED] wrote: Full_Name: Gavin Simpson Version: 2.5.0 OS: Linux (FC5) Submission from: (NULL) (128.40.33.76) Screeplots are a common plot-type used to interpret

[Rd] Wishlist: Make screeplot() a generic (PR#9541)

Full_Name: Gavin Simpson Version: 2.5.0 OS: Linux (FC5) Submission from: (NULL) (128.40.33.76) Screeplots are a common plot-type used to interpret the results of various ordination methods and other techniques. A number of packages include ordination techniques not included in a standard R

Re: [Rd] Rscript on Windows

@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC [f] +44 (0)20 7679 0565 UCL Department of Geography

Re: [Rd] Compiling R 2.4.0 in ubuntu/linux

sufficient and only R-devel is the appropriate list for questions of this nature. HTH G -- %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~% Gavin Simpson [t] +44 (0)20 7679 0522 ECRC ENSIS, UCL Geography, [f] +44 (0)20 7679 0565 Pearson Building

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