Re: [Rd] Rscript -e EXPR fails to launch if stdin is closed

2022-10-13 Thread Dirk Eddelbuettel
On 10 October 2022 at 09:34, Henrik Bengtsson wrote: | Thank you Peter for the quick fix. Will this make it into R-patched | to become R 4.2.2 soon? I checked when you posted this and didn't reply -- but this is also not an issue for littler so if you need alternative there is one $ Rscript

[Rd] tools:: extracting pkg dependencies from DCF

2022-10-13 Thread Jan Gorecki
Dear R devs, I would like to raise a request for a simple helper function. Utility function to extract package dependencies from DESCRIPTION file. I do think that tools package is better place, for such a fundamental functionality, than community packages. tools pkg seems perfect fit (having

Re: [R-pkg-devel] Problems with news in ‘NEWS’

2022-10-13 Thread Ivan Krylov
В Wed, 12 Oct 2022 20:16:20 -0500 Spencer Graves пишет: > I copied NEWS to NEWS.md and tried to format it as described in: > > > https://r-pkgs.org/other-markdown.html#news > > > Sadly, I still get the same error. It seems to be ignoring > my NEWS.md file and continuing to tell me I

Re: [R-pkg-devel] Problems with news in ‘NEWS’

2022-10-13 Thread Spencer Graves
On 10/13/22 4:34 AM, Ivan Krylov wrote: В Wed, 12 Oct 2022 20:16:20 -0500 Spencer Graves пишет: I copied NEWS to NEWS.md and tried to format it as described in: https://r-pkgs.org/other-markdown.html#news Sadly, I still get the same error. It seems to be ignoring my NEWS.md

[Bioc-devel] change of maintainer for msqrob2

2022-10-13 Thread lieven clement
Dear bioconductor team, We would like to change the maintainer of the msqrob2 package from me, Lieven Clement to the collaborator of the package Stijn Vandenbulcke (vandenbulcke.st...@gmail.com ). I also included Stijn in cc to this mail. Thank you for

Re: [Bioc-devel] change of maintainer for msqrob2

2022-10-13 Thread vandenbulcke stijn
Dear Bioconductor team, Thank you, I would like to associate this account: https://github.com/StijnVandenbulcke Best Regards Vandenbulcke Stijn Op do 13 okt. 2022 om 14:55 schreef Kern, Lori < lori.sheph...@roswellpark.org>: > I can take care of this request. > > Stijn do you have a github

Re: [Bioc-devel] commit access

2022-10-13 Thread Kern, Lori
I have add Anatoly Sorokin to those packages. Let us know if there are any issues. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263

Re: [Bioc-devel] change of maintainer for msqrob2

2022-10-13 Thread Kern, Lori
I will be sending log in information in a private email off list. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From:

Re: [Bioc-devel] change of maintainer for msqrob2

2022-10-13 Thread Kern, Lori
I can take care of this request. Stijn do you have a github account you would like associated with your Bioconductor GitCredentials account for auto upload of github ssh keys? Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of

Re: [Bioc-devel] Package checks with WARNING

2022-10-13 Thread Hervé Pagès
On 12/10/2022 13:42, Lapuente Santana, Oscar wrote: Hi Hervé, Thanks for your suggestion. The package rstatix which I used and it's set as an import, calls the coin package but this one is defined as a suggests in the description file of rstatix package