Re: [Rd] Translating Rd files

2018-08-21 Thread Duncan Murdoch
On 21/08/2018 5:53 PM, Gábor Csárdi wrote: Dear All, are there any resources (code, guidelines, anything) for translating Rd files? As far as I can tell, the help system does not have support for this. Have I missed something? Is such support desired? As of last year, support for this was

[Rd] Translating Rd files

2018-08-21 Thread Gábor Csárdi
Dear All, are there any resources (code, guidelines, anything) for translating Rd files? As far as I can tell, the help system does not have support for this. Have I missed something? Is such support desired? I am thinking about a way to register manual pages in different languages, and

[Bioc-devel] Multiple Bioconductor Maintainers?

2018-08-21 Thread Warden, Charles
Hi, Somebody asked if they could be added as a maintainer for a Bioconductor package. Is it possible to have more than one maintainer for a package? My understanding was that packages were typically maintained by one person, but I wanted to double-check. Otherwise, I see that I can add

[Bioc-devel] Updates to ExperimentHub and AnnotationHub API

2018-08-21 Thread Shepherd, Lori
We are excited to have extended the browser API for ExperimentHub and AnnotationHub to allow more resource queries outside of R. This is a work in progress and we hope to improve efficiency, speed, and organization over the next few weeks. https://annotationhub.bioconductor.org

Re: [Bioc-devel] Experiment Hub Updates

2018-08-21 Thread Shepherd, Lori
Updates are complete. Thank you for your patience. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Shepherd, Lori

[Bioc-devel] Experiment Hub Updates

2018-08-21 Thread Shepherd, Lori
We are making some further updates to experimenthub. During this time experimenthub may be unreachable. We appreciate your patience. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York

Re: [Rd] Get Logical processor count correctly whether NUMA is enabled or disabled

2018-08-21 Thread Srinivasan, Arunkumar
Dear Tomas, thank you for looking into this. Here's the output: # number of logical processors - what detectCores() should return out <- system("wmic cpu get numberoflogicalprocessors", intern=TRUE) [1] "NumberOfLogicalProcessors \r" "22 \r" "22

Re: [Rd] Get Logical processor count correctly whether NUMA is enabled or disabled

2018-08-21 Thread Tomas Kalibera
Dear Arun, thank you for the report. I agree with the analysis, detectCores() will only report logical processors in the NUMA group in which R is running. I don't have a system to test on, could you please check these workarounds for me on your systems? # number of logical processors - what

Re: [R-pkg-devel] CRAN note: src/Makevars: SHLIB_OPENMP_CXXFLAGS is included in PKG_CXXFLAGS but not in PKG_LIBS

2018-08-21 Thread Georgi Boshnakov
Dirk and James, Many thanks for the detailed advice. Georgi From: R-package-devel [r-package-devel-boun...@r-project.org] on behalf of Balamuta, James Joseph [balam...@illinois.edu] Sent: 21 August 2018 02:44 To: r-package-devel@r-project.org Subject: