[R] Recurrent analysis survival analysis data format question

2014-06-10 Thread Bob Green
Hello, I'm hoping for advice regarding how to set up a recurrent event survival analysis data file. My data consists of people released from custody, with survival time being measured as days before re imprisonment or end of the study. In the example below, id 5155 is released 5 times and

[R] Forst Plot: Multipage Output

2014-06-10 Thread Verena Weinbir
Hey guys, I have a huge forest plot, which is to big to put it on one page (you cant read a thing in this case ;-)) Is there a way to let it run over several pages? forest(resultges, main=forest plot of included studies) Thank you very much in advance! Verena [[alternative HTML

Re: [R] Forst Plot: Multipage Output

2014-06-10 Thread Jim Lemon
On Tue, 10 Jun 2014 12:03:55 PM Verena Weinbir wrote: Hey guys, I have a huge forest plot, which is to big to put it on one page (you cant read a thing in this case ;-)) Is there a way to let it run over several pages? forest(resultges, main=forest plot of included studies) Hi Verena,

Re: [R] Forst Plot: Multipage Output

2014-06-10 Thread Verena Weinbir
thank you for your answer, Jim! I want to embed the forest plot in a word document :-) So I probably have to make some specifiations within the forest () function (like landscape and mulitpage format), if possible at all ? Best, Verena On Tue, Jun 10, 2014 at 12:44 PM, Jim Lemon

Re: [R] Problem with R CMD check and the inconsolata font business.

2014-06-10 Thread BenTaylor
Not sure if this is because things have changed with MikTeX, but I had to do updmap rather than initexmf --mkmaps -- View this message in context: http://r.789695.n4.nabble.com/Problem-with-R-CMD-check-and-the-inconsolata-font-business-tp3984596p4691935.html Sent from the R help mailing

[R] r internet connection is very slow

2014-06-10 Thread Aidan Corcoran
Dear all, I have a fresh install of R on a virtual desktop running Win 7 64 bit and when I try to install packages it is extremely slow. I typed install.packages(ggplot2,dependencies=TRUE) and it takes about 1 minute for the mirror select box to open. After that I waited about 20 minutes for

Re: [R] r internet connection is very slow

2014-06-10 Thread Uwe Ligges
Probably you used a slow mirror and did not tell us which one ... or you have lots of packages installed on a very slow drive (such as a network connected location). Best, Uwe Ligges On 10.06.2014 15:52, Aidan Corcoran wrote: Dear all, I have a fresh install of R on a virtual desktop

Re: [R] Forst Plot: Multipage Output

2014-06-10 Thread David L Carlson
If you have a pdf driver such as CutePDF (free), you can use it to divide the large plot Jim suggested into smaller sheets using poster mode. You can open the multipage pdf in Word and it will convert the pdf pages but you will lose any labelling that is not horizontal. The alternative would be

Re: [R] r internet connection is very slow

2014-06-10 Thread Aidan Corcoran
thanks Uwe. I have tried a few mirrors, it makes no difference. I don't have lots of packages, as it's a fresh install. I am installing to the C drive, but as I mentioned it's a virtual desktop. However other programs don't show anything like the kind of delay I see in R. Also, just getting the

Re: [R] NA/NaN values in bnlearn package R

2014-06-10 Thread peter salzman
Alexasandro, just for your information the catnet package can handle missing data, as well as perturbed data. it deals with discrete data only which is not a problem for you. peter On Sun, Jun 8, 2014 at 9:27 PM, Alexsandro Cândido de Oliveira Silva a...@dpi.inpe.br wrote: Hello, I am

[R] dimensions of polyhedrons

2014-06-10 Thread Alexander Shenkin
Hello all, I have sets of points in (x,y,z) that represent polyhedron vertices (actually tree crowns). I have used convhulln to estimate volumes (the shapes are not necessarily convex, but good enough for now). Now I would like to extract various dimensions of these shapes - horizontal width

[R] Spatio-Temporal marked Hawkes (self-exciting) point processes

2014-06-10 Thread Ferra Xu
Hello All I'd like to know if there is any package for simulating and parameter estimation of Spatio-Temporal marked Hawkes (self-exciting) point processes? I know that PtProcess works for modeling marked point processes indexed by time, but I need to include space too. Appreciate your help

Re: [R] Recurrent analysis survival analysis data format question

2014-06-10 Thread Andrews, Chris
I wouldn't consider the person at risk for re incarceration if he is currently imprisoned. So I wouldn't use those intervals as part of the response variable. Perhaps time in custody would be a covariate used to model the time until re incarceration. One variable that is commonly needed for

[R] Deploying R in a corporate environment

2014-06-10 Thread Fernando Henrique Ferraz Pereira da Rosa
Dear all, We have recently prepared a video for a presentation on the R User Conference in Korea (http://rconference.itdaily.kr/). After the presentation on the congress and getting the proper approvals from my employer, I'd like to share the video with r-help .

Re: [R] copula fitting

2014-06-10 Thread Suzen, Mehmet
yes you can. On 7 June 2014 16:04, mudit gupta muditf...@gmail.com wrote: Hi guys, can i fit a copula to two marginal distributions with different sample size? like one has 2340 observations and other has 1912. thanks Mudit [[alternative HTML version deleted]]

Re: [R] copula fitting

2014-06-10 Thread Suzen, Mehmet
Have you checked out 'copula' package? On 11 June 2014 00:36, Suzen, Mehmet msu...@gmail.com wrote: yes you can. On 7 June 2014 16:04, mudit gupta muditf...@gmail.com wrote: Hi guys, can i fit a copula to two marginal distributions with different sample size? like one has 2340

Re: [R] r internet connection is very slow

2014-06-10 Thread Uwe Ligges
On 10.06.2014 16:32, Aidan Corcoran wrote: thanks Uwe. I have tried a few mirrors, it makes no difference. I don't have lots of packages, as it's a fresh install. I am installing to the C drive, but as I mentioned it's a virtual desktop. However other programs don't show anything like the kind