files, and
examples at the R wiki web page devoted to JM:
http://rwiki.sciviews.org/doku.php?id=packages:cran:jm
As always, any kind of feedback (e.g., questions, suggestions,
bug-reports, etc.) is more than welcome.
Best,
Dimitris
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Address
On Wed, Jun 27, 2012 at 12:45 PM, Dimitris Rizopoulos
d.rizopou...@erasmusmc.nl mailto:d.rizopou...@erasmusmc.nl wrote:
you will have to check what function pargev() returns as a result. I
would guess that is probably a list. In any case, you could use
something like the following
, reproducible code.
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),
cond.two = c(NA, 0.6, NA, 0.9, NA, 0.2),
cond.three = c(NA, NA, NA, NA, 0.1, NA))
my.df
## The data fram i want:
wanted.df - data.frame(pathway = c(pw.A, pw.B, pw.C),
cond.one = c(0.5, 0.4, NA),
cond.two = c(0.6, 0.9, 0.2),
cond.three = c(NA, 0.1, NA))
wanted.df
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Check function uniroot().
I hope it helps.
Best,
Dimitris
On 3/6/2012 7:47 PM, Gildas Mazo wrote:
Dear R users,
Given a user-defined cumulative distribution function F, I want to compute
F^{-1}(x). How is that possible with R?
Best Regards,
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Martin
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.
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Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
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-project.org/posting-guide.html
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/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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Web
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(x)][1:4]))
[,1] [,2] [,3] [,4]
[1,] 1 2 2 3
[2,] 1 2 3 4
Yet another solution is:
subER - matrix(sample(100), 10)
matrix(subER[order(row(subER), subER)],
ncol = ncol(subER), byrow = TRUE)[, 1:4]
Cheers,
Dimitris
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!
Patrick
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.
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-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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., questions, suggestions,
bug-reports, etc.) is more than welcome.
Best,
Dimitris
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,
Dennis
On Mon, Aug 29, 2011 at 12:02 PM, Dimitris Rizopoulos
d.rizopou...@erasmusmc.nl wrote:
You can do this using function lmList() from package nlme, without having to
split the data frames, e.g.,
library(nlme)
mlis- lmList(yvar ~ . - clvar | clvar, data = df)
mlis
summary(mlis)
I hope
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1.4 0.2
6 5.4 3.9 1.7 0.4
Is there an elegant way to use round() on a data frame containing
'character' variables without removing them? Thank you
Liviu
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] a b c d e f g h i j k l
Any ideas? Regards
Liviu
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.
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__
R
whether probes fall into
certain regions?
best,
salih
On Fri, Jun 24, 2011 at 10:23 AM, Dimitris Rizopoulos
d.rizopou...@erasmusmc.nl wrote:
One approach is the following:
x- rnorm(5)
y- matrix(rnorm(5*2), 5, 2)
check- y - x
check[, 1] * check[, 2] 0
I hope it helps.
Best,
Dimitris
On 6/24
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-guide.html
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.
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Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http://www.erasmusmc.nl/biostatistiek
-contained, reproducible code.
--
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Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http://www.erasmusmc.nl/biostatistiek
.
--
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Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
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Address: PO
On 6/3/2011 12:32 PM, Federico Calboli wrote:
On 3 Jun 2011, at 11:27, Dimitris Rizopoulos wrote:
this sounds like a competing risks problem. Maybe you would be interested in a
cause-specific hazard regression or the Fine Gray model
(http://cran.r-project.org/package=cmprsk).
I
-contained, reproducible code.
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, reproducible code.
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-project.org/posting-guide.html
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Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
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commented, minimal, self-contained, reproducible code.
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Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
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commented, minimal, self-contained, reproducible code.
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this.
Thanks in advance.
Best,
Dimitris
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and provide commented, minimal, self-contained, reproducible code.
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and provide commented, minimal, self-contained, reproducible code.
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guide http://www.R-project.org/posting-guide.html
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this function provides a value of 4 in row 5, column c, while it
should be 3. Is there another way I can solve my problem? Thanks!
M
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.
Secondly, is it possible to center X and Y axis so the origin is right in
the center of the graph.
With regards,
Phil
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?
Thanks Emma
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http://www.erasmusmc.nl/biostatistiek
, suggestions,
bug-reports, etc.) is more than welcome.
Best,
Dimitris
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http
222
ccc 333
ddd 444
and I would like a new row C:
A B C
aaa 111 aaa.111
bbb 222 bbb.222
ccc 333 ccc.333
ddd 444 ddd.444
How can I do this
???
Thanks
Alberto
--
Dimitris Rizopoulos
Assistant Professor
Department
-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus
, but it runs slow if t is large. Is there
a better way to do it?
nodup = function(t)
{
t.index=0
t.dup=duplicated(t)
for (i in 2:length(t))
{
if (t.dup[i]==T)
t.index=t.index+0.01
else t.index=0
t[i]=t[i]+t.index
}
return(t)
}
--
Dimitris Rizopoulos
Assistant
mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam
window ?
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http://www.erasmusmc.nl/biostatistiek
(list elements) I'd like to
access one matrix cell:
m- matrix(1:9, nrow=3, dimnames=list(LETTERS[1:3], letters[1:3]))
l- list(m1=m, m2=m*2, m3=m*3)
l[[3]] # works
l[[3]][1:2, ] # works
l[[1:3]][1, 1] # does not work
How can I slice all C-c combinations in the list?
Sören
--
Dimitris
guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http
be programmed around grep() using a suitable regular
expression, but I haven't managed to succeed.
Thanks in advance.
Best,
Dimitris
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel
-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University
://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address
://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO
/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040
.
--
Dimitris Rizopoulos
Assistant Professor
Department of Biostatistics
Erasmus University Medical Center
Address: PO Box 2040, 3000 CA Rotterdam, the Netherlands
Tel: +31/(0)10/7043478
Fax: +31/(0)10/7043014
Web: http://www.erasmusmc.nl/biostatistiek
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