This is a bug, which I just fixed in EBImage 3.13.1. As Martin suggested,
please post EBImage-related questions on the Bioconductor mailing list.
Greg
On 06/20/2012 02:57 PM, Steven Winter wrote:
I am having trouble using the resize function (in the package EBImage)
with matrices containing
Have a look at hwrite() in the hwriter package:
http://www.embl.de/~gpau/hwriter/index.html
If x is a data frame, the following will do it:
library(hwriter)
hwrite(x, x.html)
Cheers,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.embl.de/~gpau/
On 09/05/11 12:40, Samuel Le wrote
Dear Kraman,
MagickCoreTerminus() has been present in ImageMagick for quite a long
time. It seems likely that you're using a very old version of
ImageMagick. Please install a newer one.
Which versions of ImageMagick, R and EBImage are using ?
Best regards,
Greg
---
Gregoire Pau
EMBL
Hi Joel,
The function hwrite() of the package hwriter does that.
library(hwriter)
hwrite(iris[1:10,])
See examples at http://www.embl.de/~gpau/hwriter/
Cheers,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.embl.de/~gpau/
On 01/12/10 08:53, Joel wrote:
Hi
Is it possible
or model/analyse images with
statistical models, then R + EBImage is a simple and powerful alternative.
Images are just matrices.
Kind regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.embl.de/~gpau/
Oliver wrote:
baptiste auguie baptiste.auguie at googlemail.com writes:
Hi
?
Hope this helps,
Regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.embl.de/~gpau/
R Heberto Ghezzo, Dr wrote:
Hello, Working with Windows 7 in a HP laptop with R-2.10.1
I download and installed ImageMagick-6.3.7.7-Q16-Windows-dll.exe and GTK
2.12.9-win32-2, then downloaded
a previous
version of ImageMagick (such as 6.5.x).
Hope this helps,
Best regards,
Greg
---
Gregoire Pau
EMBL Research officer
http://www.ebi.ac.uk/~gpau/
Lamke wrote:
Hi group,
I've spent half a day trying to figure this out and searched through
different forums. I've tried to load EBImage
http://www.bioconductor.org/packages/release/bioc/html/EBImage.html
how to download/install EBImage.
Best regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
Sylvain Sardy wrote:
Hi,
on a lattice, I have binary 0/1 data. 1s are rare and may form clusters.
I would
options.
Best regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
L.A. wrote:
Here I am again with question I'll feel foolish for asking, when I
see the answer.
I'm trying to produce a report and here's where I get stuck:
How do I get R2HTML to produce the same
:
http://www.bioconductor.org/packages/release/bioc/html/EBImage.html
Hope this will help,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
Martial Sankar wrote:
Hi,
I am looking for a R package which is capable to process and analysis pictures
of tissues (stained
)
hwriteImage('caixa.jpg', p, br=TRUE)
hwrite('', p, br=TRUE)
closePage(p)
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
Silvano wrote:
Hi,
I'm trying put in same page:
- a data frame with 3 columns and 45 lines;
- a box plot;
the code is:
require(hwriter)
hwrite(t1000[,c
/EBImage.html
More information can be found in the vignette:
http://www.bioconductor.org/packages/release/bioc/vignettes/EBImage/inst/doc/EBImage-introduction.pdf
Best regards,
Greg
---
Gregoire Pau
EMBL Research Officer
http://www.ebi.ac.uk/~gpau/
alicedug...@btopenworld.com wrote:
Dear Sir
version (2.6.2) is pretty outdated.
Best regards,
Greg
---
Gregoire Pau
EMBL Research officer
http://www.ebi.ac.uk/~gpau/
Quin Wills wrote:
Hello all
I've just spent a few joyless hours trying to get EBImage to install in R.
I'm running Ubuntu (Hardy Heron), fully updated (including R
, table.class='sortable', row.bgcolor='#fff4f4')
closePage(p)
browseURL('test.html')
Hope this helps,
Best regards,
Greg
--
Gregoire Pau
EMBL Research officer
http://www.ebi.ac.uk/~gpau/
Tena Sakai wrote:
Hi,
How can I get R to insert such line into the head section
of html file being generated under
Hello,
How can I test in R whether a file is a symbolic link or not ? I haven't
found anything relevant in R-help but I may be wrong.
Thanks !
Greg
---
Gregoire Pau
Research Officer
EMBL Heidelberg, Germany
http://www.ebi.ac.uk/~gpau/
__
R-help@r
/~gpau/hwriter/
Its CRAN page is http://cran.r-project.org/web/packages/hwriter/
Hoping this package will be useful to the R community,
Best regards,
Greg
--
Gregoire Pau
EMBL/EBI Cambridge, UK
http://www.ebi.ac.uk/~gpau
___
R-packages mailing list
[EMAIL
/~gpau/hwriter/
Its CRAN page is http://cran.r-project.org/web/packages/hwriter/
Hoping this package will be useful to the R community,
Best regards,
Greg
--
Gregoire Pau
EMBL/EBI Cambridge, UK
http://www.ebi.ac.uk/~gpau
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