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at Nabble.com.
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read the posting guide http://www.R-project.org/posting-guide.html
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commented, minimal, self-contained, reproducible code.
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elements.
All the best
Øystein
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This may be a profoundly bad idea, but if deduction is beyond the skill of
those with time, perhaps an inferential approach could be used. Create
examples of when one approach versus another works. A book of spells, if you
will, so that rather than hoping and typing wildly, the magic
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-contained, reproducible code.
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is it still better to use NM or nmk?
Best,
Marc
[snip]
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code.
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I forgot to mention, the Design package is deprecated (which suggest
your version of R is rather dated, current is 2.15). The rms package
replaces Design.
On Thu, May 10, 2012 at 10:23 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi Grace,
I seem to have sent an empty draft before. Anyway
Hi Ivo,
You might check out biglm. It is not clear to me how to parallelize a single
model, but if you are running several, of course you can (but you already know
that). The one thing that may help is to link R against an optimized,
multithreaded BLAS such as Atlas (I think you have to do
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-guide.html
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read the posting guide http://www.R-project.org/posting-guide.html
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On Fri, May 4, 2012 at 7:17 PM, Duncan Murdoch murdoch.dun...@gmail.com wrote:
On 12-05-04 7:40 PM, Spencer Graves wrote:
[snip]
This is almost enough to drive a person to join the I hate
MicroSoft fan club.
I think that would just confirm my membership in the I hate Emacs club.
I
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?
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guide http://www.R-project.org/posting-guide.html
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.
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, Apr 18, 2012 at 11:46 PM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi Michael,
There are lots of options, but here is a simple one:
x - matrix(rnorm(3000*3000), 3000)
e - eigen(x)
only takes a couple minutes on my machine for a 3000 x 3000 matrix.
Cheers,
Josh
On Wed, Apr 18, 2012
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, 2012 at 3:25 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi,
Glancing through your code it was not immediately obvious to me why it
does not work, but I can see a lot of things that could be simplified.
It would really help if you could give us a reproducible example.
Find/upload/create
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and provide commented, minimal, self-contained, reproducible code.
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I may be putting my foot in my mouth, but I want to say that Rtools changed at
2.15 from mingw to gcc. I would check that you have the most recent version of
Rtools installed, make sure you have the right directories in your path
environment variable (which also changed, I believe), and make
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Hi,
It should be a matrix of the explanatory variables. Is that really all your
question? Did you look at the help for ?glmnet it shows several examples that
may help you understand how to use it. You can also find useful papers online
from the authors of the book Elements of Statistical
What about just setting them to missing and plotting?
md - yourdata
md[md==0] - NA
My other idea depending how you want the plot to look would be to try something
where 0 values get a blank colour or null plotting value
On Mar 16, 2012, at 22:53, Noah Silverman noahsilver...@ucla.edu wrote:
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, self-contained, reproducible code.
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to rewrite just that piece in C++ and then call it from R so
that the heaviest lifting is done in a fast, compiled language, but
you still get the ease and flexibility of R for the rest of it.
Cheers,
Josh
On Thu, Mar 15, 2012 at 9:41 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi,
Compare
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the other cells are black/blue)?
Syb
On Tue, Mar 13, 2012 at 11:48 AM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi Sybil,
You cannot turn a list into a factor. You could do:
cell_data -c('cell1','cell2')
factor_list - factor(cell_data)
or if you already have a list, unlist
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() function altogether as you
could use it to directly index your data, and then just add dimensions
back afterward.
Cheers,
Josh
Ben
On Sat, Mar 10, 2012 at 10:26 AM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi Ben,
It seems likely that there are bigger bottle necks in your overall
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.
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of it.
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frame itself. So far I have not been able to
do this using ddply - I guess I'll have to roll my own using for loops and
data frame subsetting or something similar.
Thank you for trying!
/Fredrik
On Sun, Mar 4, 2012 at 12:50 PM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi,
Still
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^^^
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You could loop through the list using lapply() or the like. One way would be
to subset the data and use . Notation which expands to all variables in the
dataset not used elsewhere in the model (ie not the outcomes).
Cheers,
Josh
On Mar 1, 2012, at 14:29, sajjad R sajja...@hotmail.com
.
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is shown to be a function(x) when I type it in R console. But there is no
function definition for testStatistics in the code. My R understanding is
still elementary.
Thanks
Aparna
On Tue, Feb 28, 2012 at 5:25 PM, Joshua Wiley jwiley.ps...@gmail.com
wrote:
Hi Aparna,
Can you please post
.
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PLEASE do read
me in a
better direction. All I'm trying to do is to include a non-random
interaction in here (age:lake), and it sure has me stumped!
-Sean
On 16 February 2012 23:06, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi Sean,
Can you fit a simpler model? Particularly I would start with just one
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Hi Tom,
I don't believe there is a standard location. You can set variables or have
functions run (say to source other functions in) in your .Rprofile file. That
way, you always have them. Once you get more than a handful of functions, it
is probably time to consider putting them into your
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and provide commented, minimal, self-contained, reproducible code.
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Or pass the covariates as a matrix. See ?lm for details.
On Feb 3, 2012, at 7:51, R. Michael Weylandt michael.weyla...@gmail.com
wrote:
Usually that's what the dot in a formula is used for.
E.g.,
data(iris)
str(iris)
lm(Petal.Width ~ ., data = iris)
Michael
On Fri, Feb 3, 2012
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--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University
/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California
if you need anything else. Thanks so much for your help!
Amanda
On Sun, Jan 8, 2012 at 7:41 PM, Joshua Wiley jwiley.ps...@gmail.com wrote:
Hi Amanda,
Can you reproduce the error with a small subset of the data? If so,
could you send it to us? For instance if say 20 cases is sufficient
.
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D
://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com
code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
__
R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
, minimal, self-contained, reproducible code.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
__
R-help@r-project.org mailing list
https
.
--
Joshua Wiley
Ph.D. Student, Health Psychology
Programmer Analyst II, Statistical Consulting Group
University of California, Los Angeles
https://joshuawiley.com/
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R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE
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