Re: [R-pkg-devel] Non-ASCII and CRAN Checks

2022-09-20 Thread Greg Hunt
Leaving data in the wrong encoding is leaving a bug around waiting to surface. Is the data correctly encoded as Latin1 (codepage 8859-1), Windows 8 bit (codepage 1252, also sometimes referred to as Latin1) or some Unicode encoding (likely UTF-8)? Character mapping is not such an issue for

Re: [R-pkg-devel] [External] Re: debian - how to replicate the error

2022-09-20 Thread Zhang, Xueqiong
Hi Ivan, thanks for these helpful inputs! I have tested my package on an ubuntu box, it seemed work well. I am currently working on setting up a debian instance on aws, and hopefully I can catch the bug from there. Will keep you posted if the bug is something we need be aware of. Thanks, 

Re: [R-pkg-devel] Non-ASCII and CRAN Checks

2022-09-20 Thread Hadley Wickham
In my experience this NOTE does not interfere with CRAN submission and you can ignore it. Hadley On Monday, September 19, 2022, Igor L wrote: > Hello everybody, > > I'm testing my package with the devtools::check() function and I got a > warning about found non-ASCII strings. > > These

Re: [R-pkg-devel] ERROR DUE TO EXISTING BIOCONDUCTOR PACKAGES NOT WORKING ON R-DEVEL

2022-09-20 Thread Duncan Murdoch
If the Bioconductor packages are unconditional requirements, maybe you should submit your package to Bioconductor rather than CRAN. Just from the name ("multiomicsR") it looks like it might be appropriate there. Duncan Murdoch On 19/09/2022 2:14 a.m., Das, Sarmistha wrote: Hello, I ran

[R-pkg-devel] ERROR DUE TO EXISTING BIOCONDUCTOR PACKAGES NOT WORKING ON R-DEVEL

2022-09-20 Thread Das, Sarmistha
Hello, I ran (1) R CMD check --as-cran mypackage.tar.gz without any error. But it gives an error while running the package on (2) current version-of-R-devel as my package uses Bioconductor package (that does not run on R version 4.3). Please help me with any idea how to fix this error. I have

Re: [R-pkg-devel] debian - how to replicate the error

2022-09-20 Thread Ivan Krylov
On Tue, 20 Sep 2022 03:28:09 + "Zhang, Xueqiong" wrote: > I don’t have a linux box, and was not able to check it via > r-hub-linux-platforms since some of bioc dependencies are not > installed on r-hub. What should I do for the error check, any ideas? There are Debian builds for both x86_64